Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_14030

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntyjbJ and mnhG are separated by 48 nucleotidesmnhG and mnhF overlap by 4 nucleotidesmnhF and mnhE overlap by 4 nucleotidesmnhE and phaD overlap by 4 nucleotides OKGIIK_14015: yjbJ - CsbD family protein, at 3,047,167 to 3,047,364 yjbJ OKGIIK_14020: mnhG - monovalent cation/H(+) antiporter subunit G, at 3,047,413 to 3,047,766 mnhG OKGIIK_14025: mnhF - K+/H+ antiporter subunit F, at 3,047,763 to 3,048,044 mnhF OKGIIK_14030: mnhE - Na+/H+ antiporter subunit E, at 3,048,041 to 3,048,529 mnhE OKGIIK_14035: phaD - monovalent cation/H+ antiporter subunit D, at 3,048,526 to 3,050,124 phaD Position (kb) 3048 3049Strain fitness (log2 ratio) -3 -2 -1 0 1at 3047.143 kb on + strandat 3047.144 kb on - strandat 3047.271 kb on + strand, within yjbJat 3047.279 kb on - strand, within yjbJat 3047.279 kb on - strand, within yjbJat 3047.279 kb on - strand, within yjbJat 3047.279 kb on - strand, within yjbJat 3047.279 kb on - strand, within yjbJat 3047.363 kb on - strandat 3047.363 kb on - strandat 3047.469 kb on - strand, within mnhGat 3047.543 kb on + strand, within mnhGat 3047.544 kb on - strand, within mnhGat 3047.649 kb on - strand, within mnhGat 3047.649 kb on - strand, within mnhGat 3047.912 kb on - strand, within mnhFat 3047.912 kb on - strand, within mnhFat 3047.912 kb on - strand, within mnhFat 3048.156 kb on + strand, within mnhEat 3048.156 kb on + strand, within mnhEat 3048.566 kb on + strandat 3048.567 kb on - strandat 3048.971 kb on + strand, within phaDat 3049.355 kb on + strand, within phaDat 3049.355 kb on + strand, within phaDat 3049.355 kb on + strand, within phaDat 3049.356 kb on - strand, within phaDat 3049.356 kb on - strand, within phaDat 3049.356 kb on - strand, within phaDat 3049.356 kb on - strand, within phaDat 3049.356 kb on - strand, within phaDat 3049.356 kb on - strand, within phaDat 3049.356 kb on - strand, within phaDat 3049.356 kb on - strand, within phaDat 3049.356 kb on - strand, within phaDat 3049.356 kb on - strand, within phaDat 3049.356 kb on - strand, within phaDat 3049.356 kb on - strand, within phaDat 3049.356 kb on - strand, within phaDat 3049.356 kb on - strand, within phaDat 3049.415 kb on + strand, within phaDat 3049.415 kb on + strand, within phaDat 3049.416 kb on - strand, within phaD

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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3,047,143 + +0.4
3,047,144 - +0.4
3,047,271 + yjbJ OKGIIK_14015 0.53 -1.9
3,047,279 - yjbJ OKGIIK_14015 0.57 -0.7
3,047,279 - yjbJ OKGIIK_14015 0.57 -0.7
3,047,279 - yjbJ OKGIIK_14015 0.57 -1.5
3,047,279 - yjbJ OKGIIK_14015 0.57 -0.5
3,047,279 - yjbJ OKGIIK_14015 0.57 +0.0
3,047,363 - +0.9
3,047,363 - +0.6
3,047,469 - mnhG OKGIIK_14020 0.16 -1.0
3,047,543 + mnhG OKGIIK_14020 0.37 -0.8
3,047,544 - mnhG OKGIIK_14020 0.37 -3.2
3,047,649 - mnhG OKGIIK_14020 0.67 -0.8
3,047,649 - mnhG OKGIIK_14020 0.67 -1.1
3,047,912 - mnhF OKGIIK_14025 0.53 -0.7
3,047,912 - mnhF OKGIIK_14025 0.53 -0.7
3,047,912 - mnhF OKGIIK_14025 0.53 +0.2
3,048,156 + mnhE OKGIIK_14030 0.24 -0.9
3,048,156 + mnhE OKGIIK_14030 0.24 -0.2
3,048,566 + -2.4
3,048,567 - -1.0
3,048,971 + phaD OKGIIK_14035 0.28 +0.1
3,049,355 + phaD OKGIIK_14035 0.52 +0.2
3,049,355 + phaD OKGIIK_14035 0.52 -0.2
3,049,355 + phaD OKGIIK_14035 0.52 -0.5
3,049,356 - phaD OKGIIK_14035 0.52 -1.1
3,049,356 - phaD OKGIIK_14035 0.52 -1.9
3,049,356 - phaD OKGIIK_14035 0.52 -0.3
3,049,356 - phaD OKGIIK_14035 0.52 -0.3
3,049,356 - phaD OKGIIK_14035 0.52 -2.5
3,049,356 - phaD OKGIIK_14035 0.52 -1.9
3,049,356 - phaD OKGIIK_14035 0.52 -0.9
3,049,356 - phaD OKGIIK_14035 0.52 +0.1
3,049,356 - phaD OKGIIK_14035 0.52 -0.9
3,049,356 - phaD OKGIIK_14035 0.52 +0.6
3,049,356 - phaD OKGIIK_14035 0.52 -0.5
3,049,356 - phaD OKGIIK_14035 0.52 -2.2
3,049,356 - phaD OKGIIK_14035 0.52 -1.5
3,049,356 - phaD OKGIIK_14035 0.52 -1.5
3,049,415 + phaD OKGIIK_14035 0.56 +0.3
3,049,415 + phaD OKGIIK_14035 0.56 -1.7
3,049,416 - phaD OKGIIK_14035 0.56 -1.0

Or see this region's nucleotide sequence