Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt accA and OKGIIK_10230 are separated by 319 nucleotides OKGIIK_10230 and labA are separated by 177 nucleotides labA and OKGIIK_10240 overlap by 4 nucleotides
OKGIIK_10225: accA - acetyl-CoA carboxylase carboxyltransferase subunit alpha, at 2,206,568 to 2,207,524
accA
OKGIIK_10230: OKGIIK_10230 - Bulb-type lectin domain-containing protein, at 2,207,844 to 2,208,956
_10230
OKGIIK_10235: labA - Maebl, at 2,209,134 to 2,209,868
labA
OKGIIK_10240: OKGIIK_10240 - tRNA(Ile)-lysidine synthase, at 2,209,865 to 2,211,166
_10240
Position (kb)
2207
2208
2209 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2207.504 kb on + strand at 2207.504 kb on + strand at 2207.505 kb on - strand at 2207.505 kb on - strand at 2207.513 kb on + strand at 2207.513 kb on + strand at 2207.514 kb on - strand at 2207.514 kb on - strand at 2207.514 kb on - strand at 2207.522 kb on + strand at 2207.523 kb on - strand at 2207.523 kb on - strand at 2207.543 kb on + strand at 2207.543 kb on + strand at 2207.631 kb on + strand at 2207.631 kb on + strand at 2207.631 kb on + strand at 2207.631 kb on + strand at 2207.631 kb on + strand at 2207.631 kb on + strand at 2207.632 kb on - strand at 2207.632 kb on - strand at 2207.632 kb on - strand at 2207.632 kb on - strand at 2207.643 kb on - strand at 2207.664 kb on + strand at 2207.664 kb on + strand at 2207.664 kb on + strand at 2207.664 kb on + strand at 2207.664 kb on + strand at 2207.664 kb on + strand at 2207.664 kb on + strand at 2207.665 kb on - strand at 2207.665 kb on - strand at 2207.665 kb on - strand at 2207.665 kb on - strand at 2207.665 kb on - strand at 2207.665 kb on - strand at 2207.665 kb on - strand at 2207.665 kb on - strand at 2207.678 kb on + strand at 2207.678 kb on + strand at 2207.679 kb on - strand at 2207.679 kb on - strand at 2207.726 kb on + strand at 2207.885 kb on - strand at 2207.885 kb on - strand at 2207.885 kb on - strand at 2208.205 kb on + strand, within OKGIIK_10230 at 2208.205 kb on + strand, within OKGIIK_10230 at 2208.206 kb on - strand, within OKGIIK_10230 at 2208.206 kb on - strand, within OKGIIK_10230 at 2208.206 kb on - strand, within OKGIIK_10230 at 2208.206 kb on - strand, within OKGIIK_10230 at 2208.206 kb on - strand, within OKGIIK_10230 at 2208.243 kb on + strand, within OKGIIK_10230 at 2208.243 kb on + strand, within OKGIIK_10230 at 2208.243 kb on + strand, within OKGIIK_10230 at 2208.287 kb on + strand, within OKGIIK_10230 at 2208.287 kb on + strand, within OKGIIK_10230 at 2208.287 kb on + strand, within OKGIIK_10230 at 2208.288 kb on - strand, within OKGIIK_10230 at 2208.288 kb on - strand, within OKGIIK_10230 at 2208.411 kb on + strand, within OKGIIK_10230 at 2208.411 kb on + strand, within OKGIIK_10230 at 2208.412 kb on - strand, within OKGIIK_10230 at 2208.690 kb on + strand, within OKGIIK_10230 at 2208.690 kb on + strand, within OKGIIK_10230 at 2208.690 kb on + strand, within OKGIIK_10230 at 2208.690 kb on + strand, within OKGIIK_10230 at 2208.690 kb on + strand, within OKGIIK_10230 at 2208.690 kb on + strand, within OKGIIK_10230 at 2208.690 kb on + strand, within OKGIIK_10230 at 2208.691 kb on - strand, within OKGIIK_10230 at 2208.691 kb on - strand, within OKGIIK_10230 at 2208.691 kb on - strand, within OKGIIK_10230 at 2208.691 kb on - strand, within OKGIIK_10230 at 2208.691 kb on - strand, within OKGIIK_10230 at 2208.691 kb on - strand, within OKGIIK_10230 at 2208.691 kb on - strand, within OKGIIK_10230 at 2208.691 kb on - strand, within OKGIIK_10230 at 2208.764 kb on + strand, within OKGIIK_10230 at 2208.765 kb on - strand, within OKGIIK_10230 at 2208.765 kb on - strand, within OKGIIK_10230 at 2208.885 kb on + strand at 2208.886 kb on - strand at 2208.931 kb on - strand at 2208.931 kb on - strand at 2208.931 kb on - strand at 2208.931 kb on - strand at 2208.931 kb on - strand at 2209.095 kb on + strand at 2209.113 kb on + strand at 2209.113 kb on + strand at 2209.156 kb on + strand at 2209.156 kb on + strand at 2209.221 kb on + strand, within labA at 2209.221 kb on + strand, within labA at 2209.221 kb on + strand, within labA at 2209.221 kb on + strand, within labA at 2209.221 kb on + strand, within labA at 2209.222 kb on - strand, within labA at 2209.222 kb on - strand, within labA at 2209.222 kb on - strand, within labA at 2209.248 kb on + strand, within labA at 2209.248 kb on + strand, within labA at 2209.332 kb on + strand, within labA at 2209.392 kb on + strand, within labA at 2209.392 kb on + strand, within labA at 2209.392 kb on + strand, within labA at 2209.485 kb on + strand, within labA at 2209.545 kb on + strand, within labA at 2209.545 kb on + strand, within labA at 2209.545 kb on + strand, within labA at 2209.545 kb on + strand, within labA at 2209.545 kb on + strand, within labA at 2209.545 kb on + strand, within labA at 2209.545 kb on + strand, within labA at 2209.545 kb on + strand, within labA at 2209.545 kb on + strand, within labA at 2209.545 kb on + strand, within labA at 2209.545 kb on + strand, within labA at 2209.545 kb on + strand, within labA at 2209.545 kb on + strand, within labA at 2209.545 kb on + strand, within labA at 2209.545 kb on + strand, within labA at 2209.545 kb on + strand, within labA at 2209.545 kb on + strand, within labA at 2209.545 kb on + strand, within labA at 2209.545 kb on + strand, within labA at 2209.545 kb on + strand, within labA at 2209.545 kb on + strand, within labA at 2209.545 kb on + strand, within labA at 2209.545 kb on + strand, within labA at 2209.545 kb on + strand, within labA at 2209.545 kb on + strand, within labA at 2209.546 kb on - strand, within labA at 2209.546 kb on - strand, within labA at 2209.547 kb on + strand, within labA at 2209.547 kb on + strand, within labA at 2209.548 kb on - strand, within labA at 2209.752 kb on + strand, within labA at 2209.752 kb on + strand, within labA at 2209.752 kb on + strand, within labA at 2209.752 kb on + strand, within labA at 2209.752 kb on + strand, within labA at 2209.752 kb on + strand, within labA at 2209.753 kb on - strand, within labA at 2209.753 kb on - strand, within labA at 2209.753 kb on - strand, within labA at 2209.753 kb on - strand, within labA at 2209.753 kb on - strand, within labA at 2209.753 kb on - strand, within labA at 2209.753 kb on - strand, within labA at 2209.753 kb on - strand, within labA at 2209.753 kb on - strand, within labA at 2209.758 kb on + strand, within labA at 2209.768 kb on + strand, within labA at 2209.768 kb on + strand, within labA at 2209.768 kb on + strand, within labA at 2209.768 kb on + strand, within labA at 2209.768 kb on + strand, within labA at 2209.768 kb on + strand, within labA at 2209.768 kb on + strand, within labA at 2209.769 kb on - strand, within labA at 2209.769 kb on - strand, within labA at 2209.769 kb on - strand, within labA at 2209.769 kb on - strand, within labA at 2209.839 kb on + strand at 2209.839 kb on + strand at 2209.839 kb on + strand at 2209.839 kb on + strand at 2209.839 kb on + strand at 2209.839 kb on + strand at 2209.839 kb on + strand at 2209.840 kb on - strand at 2209.840 kb on - strand at 2209.840 kb on - strand at 2209.840 kb on - strand at 2209.840 kb on - strand at 2209.840 kb on - strand at 2209.840 kb on - strand at 2209.840 kb on - strand at 2209.840 kb on - strand at 2209.840 kb on - strand at 2209.840 kb on - strand at 2209.840 kb on - strand at 2209.840 kb on - strand at 2209.840 kb on - strand at 2209.840 kb on - strand at 2209.840 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 2,207,504 + -0.3 2,207,504 + -1.1 2,207,505 - -1.6 2,207,505 - -1.0 2,207,513 + -0.5 2,207,513 + -1.2 2,207,514 - -1.4 2,207,514 - +1.1 2,207,514 - -1.2 2,207,522 + -1.8 2,207,523 - -0.1 2,207,523 - -1.8 2,207,543 + +0.7 2,207,543 + -1.2 2,207,631 + -0.3 2,207,631 + -0.2 2,207,631 + +0.0 2,207,631 + +0.4 2,207,631 + +1.0 2,207,631 + -0.4 2,207,632 - +0.4 2,207,632 - +1.0 2,207,632 - -1.0 2,207,632 - +0.2 2,207,643 - +1.6 2,207,664 + -1.0 2,207,664 + +0.5 2,207,664 + +0.1 2,207,664 + -0.3 2,207,664 + -0.2 2,207,664 + +0.4 2,207,664 + -0.3 2,207,665 - -0.9 2,207,665 - +0.5 2,207,665 - +0.4 2,207,665 - -0.9 2,207,665 - -2.3 2,207,665 - +1.0 2,207,665 - +1.5 2,207,665 - +0.8 2,207,678 + -0.6 2,207,678 + +1.6 2,207,679 - -0.8 2,207,679 - -1.6 2,207,726 + -0.5 2,207,885 - +0.7 2,207,885 - -1.2 2,207,885 - -0.0 2,208,205 + OKGIIK_10230 0.32 +0.2 2,208,205 + OKGIIK_10230 0.32 +0.4 2,208,206 - OKGIIK_10230 0.33 -2.0 2,208,206 - OKGIIK_10230 0.33 +0.5 2,208,206 - OKGIIK_10230 0.33 +0.1 2,208,206 - OKGIIK_10230 0.33 +0.4 2,208,206 - OKGIIK_10230 0.33 -0.2 2,208,243 + OKGIIK_10230 0.36 +0.2 2,208,243 + OKGIIK_10230 0.36 +0.2 2,208,243 + OKGIIK_10230 0.36 -0.0 2,208,287 + OKGIIK_10230 0.40 -0.6 2,208,287 + OKGIIK_10230 0.40 +1.2 2,208,287 + OKGIIK_10230 0.40 +0.4 2,208,288 - OKGIIK_10230 0.40 +2.0 2,208,288 - OKGIIK_10230 0.40 +1.1 2,208,411 + OKGIIK_10230 0.51 -0.9 2,208,411 + OKGIIK_10230 0.51 +0.0 2,208,412 - OKGIIK_10230 0.51 -1.4 2,208,690 + OKGIIK_10230 0.76 +0.1 2,208,690 + OKGIIK_10230 0.76 -0.4 2,208,690 + OKGIIK_10230 0.76 -1.4 2,208,690 + OKGIIK_10230 0.76 +2.0 2,208,690 + OKGIIK_10230 0.76 -0.2 2,208,690 + OKGIIK_10230 0.76 +0.8 2,208,690 + OKGIIK_10230 0.76 +0.4 2,208,691 - OKGIIK_10230 0.76 -0.5 2,208,691 - OKGIIK_10230 0.76 +0.4 2,208,691 - OKGIIK_10230 0.76 +0.8 2,208,691 - OKGIIK_10230 0.76 +1.5 2,208,691 - OKGIIK_10230 0.76 -0.8 2,208,691 - OKGIIK_10230 0.76 -0.8 2,208,691 - OKGIIK_10230 0.76 +0.6 2,208,691 - OKGIIK_10230 0.76 -2.1 2,208,764 + OKGIIK_10230 0.83 -0.6 2,208,765 - OKGIIK_10230 0.83 +0.8 2,208,765 - OKGIIK_10230 0.83 +0.9 2,208,885 + -2.6 2,208,886 - +1.0 2,208,931 - +0.1 2,208,931 - -1.2 2,208,931 - -1.6 2,208,931 - -0.2 2,208,931 - +0.8 2,209,095 + -0.2 2,209,113 + +0.6 2,209,113 + -1.0 2,209,156 + +0.6 2,209,156 + -1.0 2,209,221 + labA OKGIIK_10235 0.12 -1.0 2,209,221 + labA OKGIIK_10235 0.12 -1.0 2,209,221 + labA OKGIIK_10235 0.12 +0.8 2,209,221 + labA OKGIIK_10235 0.12 -2.2 2,209,221 + labA OKGIIK_10235 0.12 +0.2 2,209,222 - labA OKGIIK_10235 0.12 +0.4 2,209,222 - labA OKGIIK_10235 0.12 -1.0 2,209,222 - labA OKGIIK_10235 0.12 -2.4 2,209,248 + labA OKGIIK_10235 0.16 +0.4 2,209,248 + labA OKGIIK_10235 0.16 +0.6 2,209,332 + labA OKGIIK_10235 0.27 -1.8 2,209,392 + labA OKGIIK_10235 0.35 -0.4 2,209,392 + labA OKGIIK_10235 0.35 -1.0 2,209,392 + labA OKGIIK_10235 0.35 -0.0 2,209,485 + labA OKGIIK_10235 0.48 -0.4 2,209,545 + labA OKGIIK_10235 0.56 +0.0 2,209,545 + labA OKGIIK_10235 0.56 +0.9 2,209,545 + labA OKGIIK_10235 0.56 +1.4 2,209,545 + labA OKGIIK_10235 0.56 -0.2 2,209,545 + labA OKGIIK_10235 0.56 -0.4 2,209,545 + labA OKGIIK_10235 0.56 -0.5 2,209,545 + labA OKGIIK_10235 0.56 -0.3 2,209,545 + labA OKGIIK_10235 0.56 +0.8 2,209,545 + labA OKGIIK_10235 0.56 +0.4 2,209,545 + labA OKGIIK_10235 0.56 -1.0 2,209,545 + labA OKGIIK_10235 0.56 +0.4 2,209,545 + labA OKGIIK_10235 0.56 +0.6 2,209,545 + labA OKGIIK_10235 0.56 +0.0 2,209,545 + labA OKGIIK_10235 0.56 -1.2 2,209,545 + labA OKGIIK_10235 0.56 +1.4 2,209,545 + labA OKGIIK_10235 0.56 -1.8 2,209,545 + labA OKGIIK_10235 0.56 -0.0 2,209,545 + labA OKGIIK_10235 0.56 +0.0 2,209,545 + labA OKGIIK_10235 0.56 -0.0 2,209,545 + labA OKGIIK_10235 0.56 -1.6 2,209,545 + labA OKGIIK_10235 0.56 +0.4 2,209,545 + labA OKGIIK_10235 0.56 -1.1 2,209,545 + labA OKGIIK_10235 0.56 +0.3 2,209,545 + labA OKGIIK_10235 0.56 +0.4 2,209,545 + labA OKGIIK_10235 0.56 +1.0 2,209,546 - labA OKGIIK_10235 0.56 -0.6 2,209,546 - labA OKGIIK_10235 0.56 -1.6 2,209,547 + labA OKGIIK_10235 0.56 -2.6 2,209,547 + labA OKGIIK_10235 0.56 +0.6 2,209,548 - labA OKGIIK_10235 0.56 -0.7 2,209,752 + labA OKGIIK_10235 0.84 -0.1 2,209,752 + labA OKGIIK_10235 0.84 -1.6 2,209,752 + labA OKGIIK_10235 0.84 +0.6 2,209,752 + labA OKGIIK_10235 0.84 -0.0 2,209,752 + labA OKGIIK_10235 0.84 -2.0 2,209,752 + labA OKGIIK_10235 0.84 +0.1 2,209,753 - labA OKGIIK_10235 0.84 +0.4 2,209,753 - labA OKGIIK_10235 0.84 +0.7 2,209,753 - labA OKGIIK_10235 0.84 -0.0 2,209,753 - labA OKGIIK_10235 0.84 -0.8 2,209,753 - labA OKGIIK_10235 0.84 +0.0 2,209,753 - labA OKGIIK_10235 0.84 +1.0 2,209,753 - labA OKGIIK_10235 0.84 -1.7 2,209,753 - labA OKGIIK_10235 0.84 -1.0 2,209,753 - labA OKGIIK_10235 0.84 -0.5 2,209,758 + labA OKGIIK_10235 0.85 -0.6 2,209,768 + labA OKGIIK_10235 0.86 +0.8 2,209,768 + labA OKGIIK_10235 0.86 +0.0 2,209,768 + labA OKGIIK_10235 0.86 +0.1 2,209,768 + labA OKGIIK_10235 0.86 -1.0 2,209,768 + labA OKGIIK_10235 0.86 -0.5 2,209,768 + labA OKGIIK_10235 0.86 -0.2 2,209,768 + labA OKGIIK_10235 0.86 -1.8 2,209,769 - labA OKGIIK_10235 0.86 +0.0 2,209,769 - labA OKGIIK_10235 0.86 -0.6 2,209,769 - labA OKGIIK_10235 0.86 -2.4 2,209,769 - labA OKGIIK_10235 0.86 -0.4 2,209,839 + -2.7 2,209,839 + -0.6 2,209,839 + +0.8 2,209,839 + +0.1 2,209,839 + -1.8 2,209,839 + +0.9 2,209,839 + -0.6 2,209,840 - -0.0 2,209,840 - -0.7 2,209,840 - -2.6 2,209,840 - +0.4 2,209,840 - +0.6 2,209,840 - -0.6 2,209,840 - -0.5 2,209,840 - +0.8 2,209,840 - -2.1 2,209,840 - -1.6 2,209,840 - +2.0 2,209,840 - -0.7 2,209,840 - -1.5 2,209,840 - -0.3 2,209,840 - +0.7 2,209,840 - -0.4
Or see this region's nucleotide sequence