Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_09770

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOKGIIK_09760 and OKGIIK_09765 are separated by 92 nucleotidesOKGIIK_09765 and OKGIIK_09770 are separated by 117 nucleotidesOKGIIK_09770 and OKGIIK_09775 are separated by 21 nucleotidesOKGIIK_09775 and OKGIIK_09780 are separated by 145 nucleotidesOKGIIK_09780 and OKGIIK_09785 are separated by 13 nucleotides OKGIIK_09760: OKGIIK_09760 - 2-nitropropane dioxygenase, at 2,105,282 to 2,106,364 _09760 OKGIIK_09765: OKGIIK_09765 - Pentapeptide MXKDX repeat-containing protein, at 2,106,457 to 2,106,729 _09765 OKGIIK_09770: OKGIIK_09770 - DUF1345 domain-containing protein, at 2,106,847 to 2,107,539 _09770 OKGIIK_09775: OKGIIK_09775 - Acetyltransferase, at 2,107,561 to 2,107,836 _09775 OKGIIK_09780: OKGIIK_09780 - Osmotically inducible protein OsmC, at 2,107,982 to 2,108,407 _09780 OKGIIK_09785: OKGIIK_09785 - 3-deoxy-7-phosphoheptulonate synthase, at 2,108,421 to 2,109,515 _09785 Position (kb) 2106 2107 2108Strain fitness (log2 ratio) -2 -1 0 1 2at 2105.917 kb on - strand, within OKGIIK_09760at 2105.917 kb on - strand, within OKGIIK_09760at 2105.917 kb on - strand, within OKGIIK_09760at 2105.917 kb on - strand, within OKGIIK_09760at 2105.917 kb on - strand, within OKGIIK_09760at 2105.917 kb on - strand, within OKGIIK_09760at 2105.917 kb on - strand, within OKGIIK_09760at 2105.917 kb on - strand, within OKGIIK_09760at 2105.917 kb on - strand, within OKGIIK_09760at 2105.917 kb on - strand, within OKGIIK_09760at 2105.917 kb on - strand, within OKGIIK_09760at 2105.917 kb on - strand, within OKGIIK_09760at 2106.397 kb on - strandat 2106.397 kb on - strandat 2106.397 kb on - strandat 2106.397 kb on - strandat 2106.397 kb on - strandat 2106.397 kb on - strandat 2106.843 kb on + strandat 2106.844 kb on - strandat 2106.844 kb on - strandat 2106.844 kb on - strandat 2106.947 kb on + strand, within OKGIIK_09770at 2106.947 kb on + strand, within OKGIIK_09770at 2106.947 kb on + strand, within OKGIIK_09770at 2106.947 kb on + strand, within OKGIIK_09770at 2106.947 kb on + strand, within OKGIIK_09770at 2106.947 kb on + strand, within OKGIIK_09770at 2106.947 kb on + strand, within OKGIIK_09770at 2106.947 kb on + strand, within OKGIIK_09770at 2106.947 kb on + strand, within OKGIIK_09770at 2106.947 kb on + strand, within OKGIIK_09770at 2106.947 kb on + strand, within OKGIIK_09770at 2106.947 kb on + strand, within OKGIIK_09770at 2106.947 kb on + strand, within OKGIIK_09770at 2106.947 kb on + strand, within OKGIIK_09770at 2106.947 kb on + strand, within OKGIIK_09770at 2106.947 kb on + strand, within OKGIIK_09770at 2106.948 kb on - strand, within OKGIIK_09770at 2106.948 kb on - strand, within OKGIIK_09770at 2106.948 kb on - strand, within OKGIIK_09770at 2106.948 kb on - strand, within OKGIIK_09770at 2106.948 kb on - strand, within OKGIIK_09770at 2106.948 kb on - strand, within OKGIIK_09770at 2106.948 kb on - strand, within OKGIIK_09770at 2106.948 kb on - strand, within OKGIIK_09770at 2106.948 kb on - strand, within OKGIIK_09770at 2106.948 kb on - strand, within OKGIIK_09770at 2106.948 kb on - strand, within OKGIIK_09770at 2106.948 kb on - strand, within OKGIIK_09770at 2106.948 kb on - strand, within OKGIIK_09770at 2106.948 kb on - strand, within OKGIIK_09770at 2106.948 kb on - strand, within OKGIIK_09770at 2106.948 kb on - strand, within OKGIIK_09770at 2106.948 kb on - strand, within OKGIIK_09770at 2106.948 kb on - strand, within OKGIIK_09770at 2106.948 kb on - strand, within OKGIIK_09770at 2106.948 kb on - strand, within OKGIIK_09770at 2106.948 kb on - strand, within OKGIIK_09770at 2107.007 kb on + strand, within OKGIIK_09770at 2107.007 kb on + strand, within OKGIIK_09770at 2107.008 kb on - strand, within OKGIIK_09770at 2107.008 kb on - strand, within OKGIIK_09770at 2107.008 kb on - strand, within OKGIIK_09770at 2107.022 kb on + strand, within OKGIIK_09770at 2107.023 kb on - strand, within OKGIIK_09770at 2107.082 kb on + strand, within OKGIIK_09770at 2107.082 kb on + strand, within OKGIIK_09770at 2107.082 kb on + strand, within OKGIIK_09770at 2107.082 kb on + strand, within OKGIIK_09770at 2107.082 kb on + strand, within OKGIIK_09770at 2107.082 kb on + strand, within OKGIIK_09770at 2107.082 kb on + strand, within OKGIIK_09770at 2107.082 kb on + strand, within OKGIIK_09770at 2107.083 kb on - strand, within OKGIIK_09770at 2107.083 kb on - strand, within OKGIIK_09770at 2107.083 kb on - strand, within OKGIIK_09770at 2107.083 kb on - strand, within OKGIIK_09770at 2107.083 kb on - strand, within OKGIIK_09770at 2107.083 kb on - strand, within OKGIIK_09770at 2107.083 kb on - strand, within OKGIIK_09770at 2107.086 kb on - strand, within OKGIIK_09770at 2107.086 kb on - strand, within OKGIIK_09770at 2107.086 kb on - strand, within OKGIIK_09770at 2107.097 kb on + strand, within OKGIIK_09770at 2107.097 kb on + strand, within OKGIIK_09770at 2107.097 kb on + strand, within OKGIIK_09770at 2107.098 kb on - strand, within OKGIIK_09770at 2107.098 kb on - strand, within OKGIIK_09770at 2107.343 kb on + strand, within OKGIIK_09770at 2107.343 kb on + strand, within OKGIIK_09770at 2107.343 kb on + strand, within OKGIIK_09770at 2107.343 kb on + strand, within OKGIIK_09770at 2107.343 kb on + strand, within OKGIIK_09770at 2107.344 kb on - strand, within OKGIIK_09770at 2107.344 kb on - strand, within OKGIIK_09770at 2107.543 kb on + strandat 2107.543 kb on + strandat 2107.543 kb on + strandat 2107.543 kb on + strandat 2107.543 kb on + strandat 2107.543 kb on + strandat 2107.543 kb on + strandat 2107.543 kb on + strandat 2107.543 kb on + strandat 2107.543 kb on + strandat 2107.543 kb on + strandat 2107.543 kb on + strandat 2107.543 kb on + strandat 2107.543 kb on + strandat 2107.543 kb on + strandat 2107.543 kb on + strandat 2107.543 kb on + strandat 2107.544 kb on - strandat 2107.544 kb on - strandat 2107.544 kb on - strandat 2107.544 kb on - strandat 2107.544 kb on - strandat 2107.544 kb on - strandat 2107.544 kb on - strandat 2107.544 kb on - strandat 2107.544 kb on - strandat 2107.544 kb on - strandat 2107.544 kb on - strandat 2107.544 kb on - strandat 2107.544 kb on - strandat 2107.544 kb on - strandat 2107.544 kb on - strandat 2107.544 kb on - strandat 2107.544 kb on - strandat 2107.544 kb on - strandat 2107.580 kb on + strandat 2107.581 kb on - strandat 2107.581 kb on - strandat 2107.581 kb on - strandat 2107.581 kb on - strandat 2107.581 kb on - strandat 2107.581 kb on - strandat 2107.613 kb on + strand, within OKGIIK_09775at 2107.613 kb on + strand, within OKGIIK_09775at 2107.613 kb on + strand, within OKGIIK_09775at 2107.613 kb on + strand, within OKGIIK_09775at 2107.613 kb on + strand, within OKGIIK_09775at 2107.613 kb on + strand, within OKGIIK_09775at 2107.613 kb on + strand, within OKGIIK_09775at 2107.613 kb on + strand, within OKGIIK_09775at 2107.613 kb on + strand, within OKGIIK_09775at 2107.613 kb on + strand, within OKGIIK_09775at 2107.613 kb on + strand, within OKGIIK_09775at 2107.613 kb on + strand, within OKGIIK_09775at 2107.614 kb on - strand, within OKGIIK_09775at 2107.614 kb on - strand, within OKGIIK_09775at 2107.614 kb on - strand, within OKGIIK_09775at 2107.614 kb on - strand, within OKGIIK_09775at 2107.614 kb on - strand, within OKGIIK_09775at 2107.614 kb on - strand, within OKGIIK_09775at 2107.614 kb on - strand, within OKGIIK_09775at 2107.614 kb on - strand, within OKGIIK_09775at 2107.614 kb on - strand, within OKGIIK_09775at 2107.614 kb on - strand, within OKGIIK_09775at 2107.614 kb on - strand, within OKGIIK_09775at 2107.614 kb on - strand, within OKGIIK_09775at 2107.614 kb on - strand, within OKGIIK_09775at 2107.722 kb on + strand, within OKGIIK_09775at 2107.722 kb on + strand, within OKGIIK_09775at 2107.757 kb on + strand, within OKGIIK_09775at 2107.757 kb on + strand, within OKGIIK_09775at 2107.757 kb on + strand, within OKGIIK_09775at 2107.757 kb on + strand, within OKGIIK_09775at 2107.757 kb on + strand, within OKGIIK_09775at 2107.758 kb on - strand, within OKGIIK_09775at 2107.758 kb on - strand, within OKGIIK_09775at 2107.766 kb on - strand, within OKGIIK_09775at 2107.870 kb on + strandat 2107.870 kb on + strandat 2107.870 kb on + strandat 2107.870 kb on + strandat 2107.870 kb on + strandat 2107.870 kb on + strandat 2107.870 kb on + strandat 2107.870 kb on + strandat 2107.870 kb on + strandat 2107.870 kb on + strandat 2107.870 kb on + strandat 2107.870 kb on + strandat 2107.871 kb on - strandat 2107.871 kb on - strandat 2107.871 kb on - strandat 2107.871 kb on - strandat 2107.871 kb on - strandat 2107.871 kb on - strandat 2107.871 kb on - strandat 2107.871 kb on - strandat 2107.872 kb on - strandat 2108.075 kb on + strand, within OKGIIK_09780at 2108.153 kb on + strand, within OKGIIK_09780at 2108.154 kb on - strand, within OKGIIK_09780at 2108.442 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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2,105,917 - OKGIIK_09760 0.59 +0.6
2,105,917 - OKGIIK_09760 0.59 -2.4
2,105,917 - OKGIIK_09760 0.59 +1.4
2,105,917 - OKGIIK_09760 0.59 -0.8
2,105,917 - OKGIIK_09760 0.59 -0.2
2,105,917 - OKGIIK_09760 0.59 +0.1
2,105,917 - OKGIIK_09760 0.59 -1.9
2,105,917 - OKGIIK_09760 0.59 -0.6
2,105,917 - OKGIIK_09760 0.59 +0.8
2,105,917 - OKGIIK_09760 0.59 -0.9
2,105,917 - OKGIIK_09760 0.59 -0.6
2,105,917 - OKGIIK_09760 0.59 +0.8
2,106,397 - -0.4
2,106,397 - +1.2
2,106,397 - +0.1
2,106,397 - -0.1
2,106,397 - -0.2
2,106,397 - -0.9
2,106,843 + +0.3
2,106,844 - +0.4
2,106,844 - +0.4
2,106,844 - +0.6
2,106,947 + OKGIIK_09770 0.14 +1.1
2,106,947 + OKGIIK_09770 0.14 +0.9
2,106,947 + OKGIIK_09770 0.14 -0.8
2,106,947 + OKGIIK_09770 0.14 +0.9
2,106,947 + OKGIIK_09770 0.14 -1.2
2,106,947 + OKGIIK_09770 0.14 -0.5
2,106,947 + OKGIIK_09770 0.14 -0.2
2,106,947 + OKGIIK_09770 0.14 +0.2
2,106,947 + OKGIIK_09770 0.14 -0.5
2,106,947 + OKGIIK_09770 0.14 -0.6
2,106,947 + OKGIIK_09770 0.14 +1.1
2,106,947 + OKGIIK_09770 0.14 -1.3
2,106,947 + OKGIIK_09770 0.14 +1.6
2,106,947 + OKGIIK_09770 0.14 -0.9
2,106,947 + OKGIIK_09770 0.14 -0.2
2,106,947 + OKGIIK_09770 0.14 -1.6
2,106,948 - OKGIIK_09770 0.15 +0.6
2,106,948 - OKGIIK_09770 0.15 -0.4
2,106,948 - OKGIIK_09770 0.15 -0.5
2,106,948 - OKGIIK_09770 0.15 +0.0
2,106,948 - OKGIIK_09770 0.15 +0.1
2,106,948 - OKGIIK_09770 0.15 -0.2
2,106,948 - OKGIIK_09770 0.15 -0.4
2,106,948 - OKGIIK_09770 0.15 +1.4
2,106,948 - OKGIIK_09770 0.15 -1.2
2,106,948 - OKGIIK_09770 0.15 -0.3
2,106,948 - OKGIIK_09770 0.15 +1.9
2,106,948 - OKGIIK_09770 0.15 +0.4
2,106,948 - OKGIIK_09770 0.15 +0.8
2,106,948 - OKGIIK_09770 0.15 -2.0
2,106,948 - OKGIIK_09770 0.15 +0.0
2,106,948 - OKGIIK_09770 0.15 -0.9
2,106,948 - OKGIIK_09770 0.15 -0.3
2,106,948 - OKGIIK_09770 0.15 +0.9
2,106,948 - OKGIIK_09770 0.15 -2.0
2,106,948 - OKGIIK_09770 0.15 -0.6
2,106,948 - OKGIIK_09770 0.15 -1.9
2,107,007 + OKGIIK_09770 0.23 +0.1
2,107,007 + OKGIIK_09770 0.23 +1.0
2,107,008 - OKGIIK_09770 0.23 -0.2
2,107,008 - OKGIIK_09770 0.23 -0.2
2,107,008 - OKGIIK_09770 0.23 +0.7
2,107,022 + OKGIIK_09770 0.25 +0.2
2,107,023 - OKGIIK_09770 0.25 +0.4
2,107,082 + OKGIIK_09770 0.34 +0.6
2,107,082 + OKGIIK_09770 0.34 -0.4
2,107,082 + OKGIIK_09770 0.34 -0.7
2,107,082 + OKGIIK_09770 0.34 +1.2
2,107,082 + OKGIIK_09770 0.34 -0.3
2,107,082 + OKGIIK_09770 0.34 +0.8
2,107,082 + OKGIIK_09770 0.34 -0.6
2,107,082 + OKGIIK_09770 0.34 -0.8
2,107,083 - OKGIIK_09770 0.34 -1.1
2,107,083 - OKGIIK_09770 0.34 +0.3
2,107,083 - OKGIIK_09770 0.34 -1.2
2,107,083 - OKGIIK_09770 0.34 -0.4
2,107,083 - OKGIIK_09770 0.34 +0.0
2,107,083 - OKGIIK_09770 0.34 +0.6
2,107,083 - OKGIIK_09770 0.34 -0.0
2,107,086 - OKGIIK_09770 0.34 -1.2
2,107,086 - OKGIIK_09770 0.34 -0.5
2,107,086 - OKGIIK_09770 0.34 +0.4
2,107,097 + OKGIIK_09770 0.36 +0.0
2,107,097 + OKGIIK_09770 0.36 -2.2
2,107,097 + OKGIIK_09770 0.36 -0.6
2,107,098 - OKGIIK_09770 0.36 -2.0
2,107,098 - OKGIIK_09770 0.36 +0.0
2,107,343 + OKGIIK_09770 0.72 +0.4
2,107,343 + OKGIIK_09770 0.72 +0.6
2,107,343 + OKGIIK_09770 0.72 -1.0
2,107,343 + OKGIIK_09770 0.72 -0.6
2,107,343 + OKGIIK_09770 0.72 -0.6
2,107,344 - OKGIIK_09770 0.72 +0.5
2,107,344 - OKGIIK_09770 0.72 -1.2
2,107,543 + -2.3
2,107,543 + +0.0
2,107,543 + -0.5
2,107,543 + -0.4
2,107,543 + -0.9
2,107,543 + -1.2
2,107,543 + +0.4
2,107,543 + -1.0
2,107,543 + +0.9
2,107,543 + +0.6
2,107,543 + +0.3
2,107,543 + +0.9
2,107,543 + -1.6
2,107,543 + -2.3
2,107,543 + -0.0
2,107,543 + -0.4
2,107,543 + +0.2
2,107,544 - -0.5
2,107,544 - +1.7
2,107,544 - +0.1
2,107,544 - +1.0
2,107,544 - -1.0
2,107,544 - -2.3
2,107,544 - -0.0
2,107,544 - +1.1
2,107,544 - -1.0
2,107,544 - -1.8
2,107,544 - +0.5
2,107,544 - -0.8
2,107,544 - +0.4
2,107,544 - -0.6
2,107,544 - -2.0
2,107,544 - +0.0
2,107,544 - +0.4
2,107,544 - +0.9
2,107,580 + +0.7
2,107,581 - +0.6
2,107,581 - +0.0
2,107,581 - +0.4
2,107,581 - -1.3
2,107,581 - +0.6
2,107,581 - -2.5
2,107,613 + OKGIIK_09775 0.19 -1.3
2,107,613 + OKGIIK_09775 0.19 -0.4
2,107,613 + OKGIIK_09775 0.19 -0.6
2,107,613 + OKGIIK_09775 0.19 -0.8
2,107,613 + OKGIIK_09775 0.19 -1.8
2,107,613 + OKGIIK_09775 0.19 +0.8
2,107,613 + OKGIIK_09775 0.19 -0.2
2,107,613 + OKGIIK_09775 0.19 +0.2
2,107,613 + OKGIIK_09775 0.19 -1.1
2,107,613 + OKGIIK_09775 0.19 +0.4
2,107,613 + OKGIIK_09775 0.19 -0.6
2,107,613 + OKGIIK_09775 0.19 -1.5
2,107,614 - OKGIIK_09775 0.19 -1.0
2,107,614 - OKGIIK_09775 0.19 -0.0
2,107,614 - OKGIIK_09775 0.19 +0.0
2,107,614 - OKGIIK_09775 0.19 +0.6
2,107,614 - OKGIIK_09775 0.19 +0.9
2,107,614 - OKGIIK_09775 0.19 +0.1
2,107,614 - OKGIIK_09775 0.19 +0.0
2,107,614 - OKGIIK_09775 0.19 +0.6
2,107,614 - OKGIIK_09775 0.19 +0.6
2,107,614 - OKGIIK_09775 0.19 +0.6
2,107,614 - OKGIIK_09775 0.19 -1.2
2,107,614 - OKGIIK_09775 0.19 -1.2
2,107,614 - OKGIIK_09775 0.19 -0.2
2,107,722 + OKGIIK_09775 0.58 +1.7
2,107,722 + OKGIIK_09775 0.58 -0.7
2,107,757 + OKGIIK_09775 0.71 -0.4
2,107,757 + OKGIIK_09775 0.71 -0.8
2,107,757 + OKGIIK_09775 0.71 -2.3
2,107,757 + OKGIIK_09775 0.71 +0.4
2,107,757 + OKGIIK_09775 0.71 +0.5
2,107,758 - OKGIIK_09775 0.71 -0.6
2,107,758 - OKGIIK_09775 0.71 -0.5
2,107,766 - OKGIIK_09775 0.74 +0.1
2,107,870 + +0.0
2,107,870 + +0.4
2,107,870 + -0.7
2,107,870 + +1.2
2,107,870 + -1.4
2,107,870 + -0.5
2,107,870 + +0.2
2,107,870 + +0.1
2,107,870 + -0.7
2,107,870 + -0.6
2,107,870 + -0.2
2,107,870 + -1.2
2,107,871 - +0.2
2,107,871 - -1.2
2,107,871 - +0.4
2,107,871 - -0.9
2,107,871 - +0.5
2,107,871 - +0.5
2,107,871 - -0.4
2,107,871 - -0.6
2,107,872 - +0.4
2,108,075 + OKGIIK_09780 0.22 -1.0
2,108,153 + OKGIIK_09780 0.40 -1.0
2,108,154 - OKGIIK_09780 0.40 +0.6
2,108,442 - -0.0

Or see this region's nucleotide sequence