Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_07930

Experiment: no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOKGIIK_07915 and OKGIIK_07920 are separated by 78 nucleotidesOKGIIK_07920 and OKGIIK_07925 are separated by 50 nucleotidesOKGIIK_07925 and OKGIIK_07930 overlap by 4 nucleotidesOKGIIK_07930 and fkpA are separated by 144 nucleotides OKGIIK_07915: OKGIIK_07915 - 3-hydroxyacyl-CoA dehydrogenase, at 1,752,585 to 1,754,651 _07915 OKGIIK_07920: OKGIIK_07920 - DUF2058 domain-containing protein, at 1,754,730 to 1,755,290 _07920 OKGIIK_07925: OKGIIK_07925 - Protein SlyX-like protein, at 1,755,341 to 1,755,565 _07925 OKGIIK_07930: OKGIIK_07930 - UDP-glucose 6-dehydrogenase, at 1,755,562 to 1,756,908 _07930 OKGIIK_07935: fkpA - peptidylprolyl isomerase, at 1,757,053 to 1,757,799 fkpA Position (kb) 1755 1756 1757Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1754.577 kb on + strandat 1754.578 kb on - strandat 1754.684 kb on + strandat 1754.684 kb on + strandat 1754.684 kb on + strandat 1754.684 kb on + strandat 1754.684 kb on + strandat 1754.684 kb on + strandat 1754.684 kb on + strandat 1754.684 kb on + strandat 1754.684 kb on + strandat 1754.684 kb on + strandat 1754.684 kb on + strandat 1754.684 kb on + strandat 1754.684 kb on + strandat 1754.684 kb on + strandat 1754.685 kb on - strandat 1754.685 kb on - strandat 1754.685 kb on - strandat 1754.685 kb on - strandat 1754.685 kb on - strandat 1754.685 kb on - strandat 1754.685 kb on - strandat 1754.685 kb on - strandat 1754.685 kb on - strandat 1754.685 kb on - strandat 1754.685 kb on - strandat 1754.685 kb on - strandat 1754.685 kb on - strandat 1754.685 kb on - strandat 1754.685 kb on - strandat 1754.691 kb on + strandat 1754.692 kb on - strandat 1754.692 kb on - strandat 1754.692 kb on - strandat 1754.692 kb on - strandat 1754.692 kb on - strandat 1754.692 kb on - strandat 1754.857 kb on + strand, within OKGIIK_07920at 1754.858 kb on - strand, within OKGIIK_07920at 1754.858 kb on - strand, within OKGIIK_07920at 1754.951 kb on - strand, within OKGIIK_07920at 1755.112 kb on + strand, within OKGIIK_07920at 1755.112 kb on + strand, within OKGIIK_07920at 1755.112 kb on + strand, within OKGIIK_07920at 1755.112 kb on + strand, within OKGIIK_07920at 1755.112 kb on + strand, within OKGIIK_07920at 1755.112 kb on + strand, within OKGIIK_07920at 1755.112 kb on + strand, within OKGIIK_07920at 1755.112 kb on + strand, within OKGIIK_07920at 1755.112 kb on + strand, within OKGIIK_07920at 1755.113 kb on - strand, within OKGIIK_07920at 1755.113 kb on - strand, within OKGIIK_07920at 1755.113 kb on - strand, within OKGIIK_07920at 1755.113 kb on - strand, within OKGIIK_07920at 1755.345 kb on + strandat 1755.345 kb on + strandat 1755.345 kb on + strandat 1755.345 kb on + strandat 1755.346 kb on - strandat 1755.346 kb on - strandat 1755.346 kb on - strandat 1755.346 kb on - strandat 1755.346 kb on - strandat 1755.346 kb on - strandat 1755.346 kb on - strandat 1756.941 kb on - strandat 1756.941 kb on - strandat 1756.941 kb on - strandat 1756.941 kb on - strandat 1756.941 kb on - strandat 1756.941 kb on - strandat 1756.941 kb on - strandat 1756.941 kb on - strandat 1756.941 kb on - strandat 1756.941 kb on - strandat 1756.946 kb on - strandat 1757.054 kb on + strandat 1757.054 kb on + strandat 1757.054 kb on + strandat 1757.054 kb on + strandat 1757.054 kb on + strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.817 kb on - strandat 1757.823 kb on - strandat 1757.823 kb on - strandat 1757.823 kb on - strandat 1757.823 kb on - strandat 1757.823 kb on - strandat 1757.823 kb on - strandat 1757.823 kb on - strandat 1757.823 kb on - strandat 1757.823 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction no stress control
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1,754,577 + +0.5
1,754,578 - -0.7
1,754,684 + +0.2
1,754,684 + -0.2
1,754,684 + -1.0
1,754,684 + +0.6
1,754,684 + +0.4
1,754,684 + -0.9
1,754,684 + +1.1
1,754,684 + -0.4
1,754,684 + -1.9
1,754,684 + -0.1
1,754,684 + +0.0
1,754,684 + +1.4
1,754,684 + +0.5
1,754,684 + -0.9
1,754,685 - -1.5
1,754,685 - -1.0
1,754,685 - -0.6
1,754,685 - -0.6
1,754,685 - -0.9
1,754,685 - -0.7
1,754,685 - +0.3
1,754,685 - -1.7
1,754,685 - -0.0
1,754,685 - +0.8
1,754,685 - +1.1
1,754,685 - +2.0
1,754,685 - -2.2
1,754,685 - +0.1
1,754,685 - +1.4
1,754,691 + -0.9
1,754,692 - +0.2
1,754,692 - +0.3
1,754,692 - -1.7
1,754,692 - +1.1
1,754,692 - +0.6
1,754,692 - -2.0
1,754,857 + OKGIIK_07920 0.23 -1.2
1,754,858 - OKGIIK_07920 0.23 -1.0
1,754,858 - OKGIIK_07920 0.23 -0.6
1,754,951 - OKGIIK_07920 0.39 +0.3
1,755,112 + OKGIIK_07920 0.68 -0.8
1,755,112 + OKGIIK_07920 0.68 +0.9
1,755,112 + OKGIIK_07920 0.68 -0.0
1,755,112 + OKGIIK_07920 0.68 +0.4
1,755,112 + OKGIIK_07920 0.68 -0.5
1,755,112 + OKGIIK_07920 0.68 -0.7
1,755,112 + OKGIIK_07920 0.68 -2.2
1,755,112 + OKGIIK_07920 0.68 +0.5
1,755,112 + OKGIIK_07920 0.68 +0.3
1,755,113 - OKGIIK_07920 0.68 -0.4
1,755,113 - OKGIIK_07920 0.68 +0.1
1,755,113 - OKGIIK_07920 0.68 +0.2
1,755,113 - OKGIIK_07920 0.68 +0.0
1,755,345 + -1.1
1,755,345 + +0.8
1,755,345 + -0.8
1,755,345 + -0.5
1,755,346 - -0.5
1,755,346 - -0.5
1,755,346 - +0.4
1,755,346 - -0.6
1,755,346 - +0.5
1,755,346 - -1.2
1,755,346 - +0.4
1,756,941 - -2.3
1,756,941 - -0.6
1,756,941 - +1.7
1,756,941 - +0.9
1,756,941 - -0.4
1,756,941 - -0.2
1,756,941 - -2.5
1,756,941 - -1.5
1,756,941 - -0.9
1,756,941 - -1.7
1,756,946 - -1.9
1,757,054 + -0.2
1,757,054 + -0.7
1,757,054 + +2.3
1,757,054 + -1.0
1,757,054 + -0.0
1,757,817 - +0.7
1,757,817 - +0.1
1,757,817 - -2.8
1,757,817 - +0.4
1,757,817 - -2.0
1,757,817 - +0.3
1,757,817 - +0.3
1,757,817 - -0.9
1,757,817 - +0.0
1,757,817 - -0.9
1,757,817 - -1.6
1,757,817 - -1.1
1,757,817 - -0.8
1,757,817 - -1.6
1,757,817 - +0.2
1,757,817 - +0.5
1,757,817 - -1.4
1,757,817 - -1.6
1,757,817 - -1.3
1,757,817 - -2.4
1,757,817 - +0.1
1,757,817 - -2.0
1,757,817 - -0.6
1,757,817 - -0.7
1,757,817 - -1.0
1,757,817 - -1.0
1,757,817 - +0.0
1,757,817 - -1.6
1,757,817 - -2.1
1,757,817 - -0.7
1,757,817 - -0.6
1,757,817 - -0.9
1,757,817 - -0.6
1,757,817 - -1.3
1,757,817 - +0.0
1,757,817 - -0.6
1,757,823 - -0.7
1,757,823 - -1.7
1,757,823 - +0.2
1,757,823 - -0.3
1,757,823 - +1.0
1,757,823 - -0.6
1,757,823 - -0.9
1,757,823 - -0.6
1,757,823 - -0.2

Or see this region's nucleotide sequence