Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NOLOHH_23035 and NOLOHH_23040 are separated by 157 nucleotides NOLOHH_23040 and NOLOHH_23045 overlap by 4 nucleotides NOLOHH_23045 and NOLOHH_23050 are separated by 1 nucleotides NOLOHH_23050 and NOLOHH_23055 overlap by 4 nucleotides
NOLOHH_23035: NOLOHH_23035 - DUF5405 domain-containing protein, at 4,532,845 to 4,533,126
_23035
NOLOHH_23040: NOLOHH_23040 - hypothetical protein, at 4,533,284 to 4,533,877
_23040
NOLOHH_23045: NOLOHH_23045 - hypothetical protein, at 4,533,874 to 4,534,113
_23045
NOLOHH_23050: NOLOHH_23050 - Ead/Ea22-like protein, at 4,534,115 to 4,534,630
_23050
NOLOHH_23055: NOLOHH_23055 - DUF550 domain-containing protein, at 4,534,627 to 4,535,343
_23055
Position (kb)
4533
4534
4535 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4533.005 kb on + strand, within NOLOHH_23035 at 4533.006 kb on - strand, within NOLOHH_23035 at 4533.074 kb on + strand, within NOLOHH_23035 at 4533.300 kb on + strand at 4533.374 kb on + strand, within NOLOHH_23040 at 4533.454 kb on + strand, within NOLOHH_23040 at 4533.454 kb on + strand, within NOLOHH_23040 at 4533.475 kb on + strand, within NOLOHH_23040 at 4533.548 kb on - strand, within NOLOHH_23040 at 4533.548 kb on - strand, within NOLOHH_23040 at 4533.562 kb on + strand, within NOLOHH_23040 at 4533.654 kb on - strand, within NOLOHH_23040 at 4533.656 kb on + strand, within NOLOHH_23040 at 4533.657 kb on - strand, within NOLOHH_23040 at 4533.775 kb on + strand, within NOLOHH_23040 at 4533.775 kb on + strand, within NOLOHH_23040 at 4533.821 kb on - strand at 4533.821 kb on - strand at 4533.837 kb on + strand at 4533.837 kb on + strand at 4533.839 kb on + strand at 4533.938 kb on + strand, within NOLOHH_23045 at 4533.997 kb on + strand, within NOLOHH_23045 at 4533.998 kb on - strand, within NOLOHH_23045 at 4534.088 kb on + strand, within NOLOHH_23045 at 4534.151 kb on + strand at 4534.201 kb on + strand, within NOLOHH_23050 at 4534.201 kb on + strand, within NOLOHH_23050 at 4534.203 kb on + strand, within NOLOHH_23050 at 4534.203 kb on + strand, within NOLOHH_23050 at 4534.203 kb on + strand, within NOLOHH_23050 at 4534.204 kb on - strand, within NOLOHH_23050 at 4534.307 kb on - strand, within NOLOHH_23050 at 4534.381 kb on + strand, within NOLOHH_23050 at 4534.416 kb on + strand, within NOLOHH_23050 at 4534.416 kb on + strand, within NOLOHH_23050 at 4534.449 kb on + strand, within NOLOHH_23050 at 4534.513 kb on + strand, within NOLOHH_23050 at 4534.576 kb on + strand, within NOLOHH_23050 at 4534.584 kb on + strand at 4534.584 kb on + strand at 4534.585 kb on - strand at 4534.586 kb on + strand at 4534.586 kb on + strand at 4534.596 kb on + strand at 4534.596 kb on + strand at 4534.606 kb on + strand at 4534.606 kb on + strand at 4534.635 kb on + strand at 4534.681 kb on + strand at 4534.692 kb on + strand at 4534.938 kb on + strand, within NOLOHH_23055 at 4535.040 kb on + strand, within NOLOHH_23055 at 4535.111 kb on + strand, within NOLOHH_23055 at 4535.111 kb on + strand, within NOLOHH_23055
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 4,533,005 + NOLOHH_23035 0.57 +0.4 4,533,006 - NOLOHH_23035 0.57 -0.1 4,533,074 + NOLOHH_23035 0.81 -1.1 4,533,300 + +0.7 4,533,374 + NOLOHH_23040 0.15 +0.3 4,533,454 + NOLOHH_23040 0.29 +1.0 4,533,454 + NOLOHH_23040 0.29 -0.5 4,533,475 + NOLOHH_23040 0.32 -1.7 4,533,548 - NOLOHH_23040 0.44 -1.3 4,533,548 - NOLOHH_23040 0.44 -1.0 4,533,562 + NOLOHH_23040 0.47 -1.8 4,533,654 - NOLOHH_23040 0.62 +2.3 4,533,656 + NOLOHH_23040 0.63 -0.3 4,533,657 - NOLOHH_23040 0.63 +1.3 4,533,775 + NOLOHH_23040 0.83 +0.7 4,533,775 + NOLOHH_23040 0.83 -0.8 4,533,821 - +0.7 4,533,821 - -1.3 4,533,837 + -0.7 4,533,837 + +1.4 4,533,839 + +0.1 4,533,938 + NOLOHH_23045 0.27 -0.9 4,533,997 + NOLOHH_23045 0.51 +0.7 4,533,998 - NOLOHH_23045 0.52 -0.5 4,534,088 + NOLOHH_23045 0.89 -0.2 4,534,151 + -0.3 4,534,201 + NOLOHH_23050 0.17 +0.3 4,534,201 + NOLOHH_23050 0.17 -0.3 4,534,203 + NOLOHH_23050 0.17 -2.7 4,534,203 + NOLOHH_23050 0.17 -1.8 4,534,203 + NOLOHH_23050 0.17 +1.7 4,534,204 - NOLOHH_23050 0.17 -1.6 4,534,307 - NOLOHH_23050 0.37 +1.7 4,534,381 + NOLOHH_23050 0.52 -0.3 4,534,416 + NOLOHH_23050 0.58 -1.3 4,534,416 + NOLOHH_23050 0.58 +0.7 4,534,449 + NOLOHH_23050 0.65 -0.3 4,534,513 + NOLOHH_23050 0.77 -1.4 4,534,576 + NOLOHH_23050 0.89 +0.3 4,534,584 + +0.2 4,534,584 + -0.7 4,534,585 - -0.3 4,534,586 + -0.4 4,534,586 + +0.3 4,534,596 + +0.1 4,534,596 + -0.7 4,534,606 + -0.8 4,534,606 + +0.2 4,534,635 + -1.4 4,534,681 + -0.3 4,534,692 + +1.3 4,534,938 + NOLOHH_23055 0.43 +0.0 4,535,040 + NOLOHH_23055 0.58 -0.0 4,535,111 + NOLOHH_23055 0.68 -2.6 4,535,111 + NOLOHH_23055 0.68 -1.1
Or see this region's nucleotide sequence