Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NOLOHH_22270 and artP are separated by 217 nucleotides artP and artI are separated by 17 nucleotides artI and artQ are separated by 6 nucleotides artQ and artM overlap by 1 nucleotides
NOLOHH_22270: NOLOHH_22270 - lipoprotein, at 4,398,620 to 4,399,135
_22270
NOLOHH_22275: artP - arginine ABC transporter ATP-binding protein ArtP, at 4,399,353 to 4,400,081
artP
NOLOHH_22280: artI - Putative ABC transporter arginine-binding protein 2, at 4,400,099 to 4,400,830
artI
NOLOHH_22285: artQ - arginine ABC transporter permease ArtQ, at 4,400,837 to 4,401,553
artQ
NOLOHH_22290: artM - arginine ABC transporter permease ArtM, at 4,401,553 to 4,402,221
artM
Position (kb)
4400
4401 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4399.233 kb on - strand at 4399.245 kb on + strand at 4399.280 kb on - strand at 4399.322 kb on + strand at 4399.323 kb on - strand at 4399.323 kb on - strand at 4399.326 kb on + strand at 4399.342 kb on + strand at 4399.359 kb on - strand at 4399.377 kb on - strand at 4399.450 kb on + strand, within artP at 4399.623 kb on + strand, within artP at 4399.837 kb on + strand, within artP at 4399.968 kb on - strand, within artP at 4399.989 kb on + strand, within artP at 4399.989 kb on + strand, within artP at 4399.989 kb on + strand, within artP at 4399.990 kb on - strand, within artP at 4400.124 kb on + strand at 4400.137 kb on + strand at 4400.284 kb on + strand, within artI at 4400.293 kb on + strand, within artI at 4400.411 kb on + strand, within artI at 4400.411 kb on + strand, within artI at 4400.450 kb on + strand, within artI at 4400.450 kb on + strand, within artI at 4400.450 kb on + strand, within artI at 4400.565 kb on - strand, within artI at 4400.696 kb on + strand, within artI at 4400.696 kb on + strand, within artI at 4400.795 kb on + strand at 4400.828 kb on + strand at 4400.828 kb on + strand at 4400.829 kb on - strand at 4401.035 kb on + strand, within artQ at 4401.179 kb on + strand, within artQ at 4401.397 kb on - strand, within artQ at 4401.703 kb on + strand, within artM at 4401.703 kb on + strand, within artM at 4401.703 kb on + strand, within artM at 4401.705 kb on + strand, within artM at 4401.705 kb on + strand, within artM at 4401.827 kb on + strand, within artM at 4401.827 kb on + strand, within artM
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 4,399,233 - -0.3 4,399,245 + +0.7 4,399,280 - +0.7 4,399,322 + +0.7 4,399,323 - +1.1 4,399,323 - +0.7 4,399,326 + -0.7 4,399,342 + +1.2 4,399,359 - +0.7 4,399,377 - -0.9 4,399,450 + artP NOLOHH_22275 0.13 +0.7 4,399,623 + artP NOLOHH_22275 0.37 +2.7 4,399,837 + artP NOLOHH_22275 0.66 -0.9 4,399,968 - artP NOLOHH_22275 0.84 +0.1 4,399,989 + artP NOLOHH_22275 0.87 -1.1 4,399,989 + artP NOLOHH_22275 0.87 -0.9 4,399,989 + artP NOLOHH_22275 0.87 +0.7 4,399,990 - artP NOLOHH_22275 0.87 +0.7 4,400,124 + +1.7 4,400,137 + +0.7 4,400,284 + artI NOLOHH_22280 0.25 +0.1 4,400,293 + artI NOLOHH_22280 0.27 -0.3 4,400,411 + artI NOLOHH_22280 0.43 +0.9 4,400,411 + artI NOLOHH_22280 0.43 +0.1 4,400,450 + artI NOLOHH_22280 0.48 -1.9 4,400,450 + artI NOLOHH_22280 0.48 +0.7 4,400,450 + artI NOLOHH_22280 0.48 -1.1 4,400,565 - artI NOLOHH_22280 0.64 -2.5 4,400,696 + artI NOLOHH_22280 0.82 -0.2 4,400,696 + artI NOLOHH_22280 0.82 -0.7 4,400,795 + -0.3 4,400,828 + +0.7 4,400,828 + +0.3 4,400,829 - +0.7 4,401,035 + artQ NOLOHH_22285 0.28 -1.6 4,401,179 + artQ NOLOHH_22285 0.48 +0.1 4,401,397 - artQ NOLOHH_22285 0.78 +1.1 4,401,703 + artM NOLOHH_22290 0.22 +0.5 4,401,703 + artM NOLOHH_22290 0.22 +1.7 4,401,703 + artM NOLOHH_22290 0.22 +0.7 4,401,705 + artM NOLOHH_22290 0.23 +0.7 4,401,705 + artM NOLOHH_22290 0.23 -0.7 4,401,827 + artM NOLOHH_22290 0.41 +0.7 4,401,827 + artM NOLOHH_22290 0.41 -0.9
Or see this region's nucleotide sequence