Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt narH and narG overlap by 4 nucleotides narG and narK are separated by 515 nucleotides
NOLOHH_20510: narH - nitrate reductase subunit beta, at 4,033,931 to 4,035,469
narH
NOLOHH_20515: narG - nitrate reductase subunit alpha, at 4,035,466 to 4,039,209
narG
NOLOHH_20520: narK - nitrate transporter NarK, at 4,039,725 to 4,041,116
narK
Position (kb)
4035
4036
4037
4038
4039
4040 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4034.477 kb on - strand, within narH at 4034.647 kb on - strand, within narH at 4035.358 kb on - strand at 4035.473 kb on - strand at 4035.531 kb on + strand at 4035.579 kb on - strand at 4035.583 kb on - strand at 4035.583 kb on - strand at 4035.619 kb on - strand at 4035.619 kb on - strand at 4035.619 kb on - strand at 4035.723 kb on - strand at 4035.723 kb on - strand at 4035.723 kb on - strand at 4035.797 kb on - strand at 4035.797 kb on - strand at 4035.906 kb on - strand, within narG at 4036.099 kb on - strand, within narG at 4036.131 kb on - strand, within narG at 4036.276 kb on - strand, within narG at 4036.509 kb on + strand, within narG at 4036.510 kb on - strand, within narG at 4036.551 kb on + strand, within narG at 4036.792 kb on - strand, within narG at 4036.813 kb on - strand, within narG at 4037.065 kb on - strand, within narG at 4037.161 kb on - strand, within narG at 4037.163 kb on - strand, within narG at 4037.378 kb on + strand, within narG at 4037.379 kb on - strand, within narG at 4037.474 kb on - strand, within narG at 4037.474 kb on - strand, within narG at 4037.474 kb on - strand, within narG at 4037.474 kb on - strand, within narG at 4037.474 kb on - strand, within narG at 4037.478 kb on - strand, within narG at 4037.478 kb on - strand, within narG at 4037.478 kb on - strand, within narG at 4037.703 kb on - strand, within narG at 4037.703 kb on - strand, within narG at 4037.737 kb on - strand, within narG at 4038.039 kb on + strand, within narG at 4038.040 kb on - strand, within narG at 4038.073 kb on - strand, within narG at 4038.221 kb on + strand, within narG at 4038.233 kb on + strand, within narG at 4038.234 kb on - strand, within narG at 4038.271 kb on + strand, within narG at 4038.357 kb on - strand, within narG at 4038.464 kb on + strand, within narG at 4038.465 kb on - strand, within narG at 4038.796 kb on - strand, within narG at 4039.521 kb on + strand at 4039.599 kb on - strand at 4039.599 kb on - strand at 4039.604 kb on - strand at 4039.606 kb on - strand at 4039.608 kb on - strand at 4039.608 kb on - strand at 4039.734 kb on - strand at 4039.748 kb on - strand at 4040.184 kb on + strand, within narK
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 4,034,477 - narH NOLOHH_20510 0.35 +1.0 4,034,647 - narH NOLOHH_20510 0.47 +0.6 4,035,358 - -2.2 4,035,473 - -2.8 4,035,531 + -1.0 4,035,579 - +3.0 4,035,583 - +2.2 4,035,583 - -1.0 4,035,619 - -1.0 4,035,619 - +0.6 4,035,619 - +0.6 4,035,723 - -1.7 4,035,723 - +1.2 4,035,723 - +1.9 4,035,797 - -0.2 4,035,797 - +0.6 4,035,906 - narG NOLOHH_20515 0.12 +1.0 4,036,099 - narG NOLOHH_20515 0.17 -0.9 4,036,131 - narG NOLOHH_20515 0.18 -0.4 4,036,276 - narG NOLOHH_20515 0.22 +0.6 4,036,509 + narG NOLOHH_20515 0.28 +0.1 4,036,510 - narG NOLOHH_20515 0.28 +0.2 4,036,551 + narG NOLOHH_20515 0.29 +1.6 4,036,792 - narG NOLOHH_20515 0.35 +1.2 4,036,813 - narG NOLOHH_20515 0.36 -0.4 4,037,065 - narG NOLOHH_20515 0.43 -0.6 4,037,161 - narG NOLOHH_20515 0.45 +0.2 4,037,163 - narG NOLOHH_20515 0.45 +0.6 4,037,378 + narG NOLOHH_20515 0.51 +1.6 4,037,379 - narG NOLOHH_20515 0.51 -0.9 4,037,474 - narG NOLOHH_20515 0.54 +1.6 4,037,474 - narG NOLOHH_20515 0.54 +1.6 4,037,474 - narG NOLOHH_20515 0.54 -1.4 4,037,474 - narG NOLOHH_20515 0.54 +0.6 4,037,474 - narG NOLOHH_20515 0.54 +0.6 4,037,478 - narG NOLOHH_20515 0.54 -0.4 4,037,478 - narG NOLOHH_20515 0.54 +0.1 4,037,478 - narG NOLOHH_20515 0.54 +1.2 4,037,703 - narG NOLOHH_20515 0.60 +0.0 4,037,703 - narG NOLOHH_20515 0.60 +1.1 4,037,737 - narG NOLOHH_20515 0.61 +1.6 4,038,039 + narG NOLOHH_20515 0.69 +2.2 4,038,040 - narG NOLOHH_20515 0.69 -0.8 4,038,073 - narG NOLOHH_20515 0.70 -0.4 4,038,221 + narG NOLOHH_20515 0.74 -0.2 4,038,233 + narG NOLOHH_20515 0.74 -0.1 4,038,234 - narG NOLOHH_20515 0.74 -2.2 4,038,271 + narG NOLOHH_20515 0.75 -0.6 4,038,357 - narG NOLOHH_20515 0.77 +0.6 4,038,464 + narG NOLOHH_20515 0.80 -0.4 4,038,465 - narG NOLOHH_20515 0.80 +0.6 4,038,796 - narG NOLOHH_20515 0.89 +1.6 4,039,521 + +0.6 4,039,599 - +1.4 4,039,599 - +1.0 4,039,604 - -1.5 4,039,606 - -1.0 4,039,608 - +0.6 4,039,608 - -0.4 4,039,734 - -1.4 4,039,748 - +0.1 4,040,184 + narK NOLOHH_20520 0.33 -0.4
Or see this region's nucleotide sequence