Strain Fitness in Escherichia coli ECOR27 around NOLOHH_18955
Experiment: K5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | K5 |
|---|---|---|---|---|---|
| remove | |||||
| 3,725,402 | + | ddpX | NOLOHH_18955 | 0.21 | +1.2 |
| 3,725,539 | + | ddpX | NOLOHH_18955 | 0.45 | +0.6 |
| 3,725,539 | + | ddpX | NOLOHH_18955 | 0.45 | +0.6 |
| 3,725,830 | - | -1.0 | |||
| 3,725,831 | + | -0.4 | |||
| 3,726,022 | + | +0.6 | |||
| 3,726,023 | - | -1.4 | |||
| 3,726,353 | + | ddpA | NOLOHH_18960 | 0.31 | -0.4 |
| 3,726,545 | - | ddpA | NOLOHH_18960 | 0.43 | +1.6 |
| 3,726,707 | + | ddpA | NOLOHH_18960 | 0.54 | +2.2 |
| 3,726,708 | - | ddpA | NOLOHH_18960 | 0.54 | -0.4 |
Or see this region's nucleotide sequence