Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt clcB and dmsD are separated by 194 nucleotides dmsD and NOLOHH_18265 are separated by 42 nucleotides NOLOHH_18265 and dmsB are separated by 1 nucleotides dmsB and bisC are separated by 10 nucleotides
NOLOHH_18255: clcB - voltage-gated ClC-type chloride channel ClcB, at 3,586,470 to 3,587,726
clcB
NOLOHH_18260: dmsD - Tat proofreading chaperone DmsD, at 3,587,921 to 3,588,535
dmsD
NOLOHH_18265: NOLOHH_18265 - dimethylsulfoxide reductase, at 3,588,578 to 3,589,432
_18265
NOLOHH_18270: dmsB - dimethylsulfoxide reductase subunit B, at 3,589,434 to 3,590,051
dmsB
NOLOHH_18275: bisC - Anaerobic selenocysteine-containing dehydrogenase, at 3,590,062 to 3,592,458
bisC
Position (kb)
3588
3589
3590 Strain fitness (log2 ratio)
-1
0
1 at 3587.622 kb on - strand at 3587.727 kb on - strand at 3588.619 kb on - strand at 3588.663 kb on - strand at 3588.674 kb on - strand, within NOLOHH_18265 at 3588.674 kb on - strand, within NOLOHH_18265 at 3588.674 kb on - strand, within NOLOHH_18265 at 3589.080 kb on - strand, within NOLOHH_18265 at 3589.374 kb on - strand at 3589.374 kb on - strand at 3590.182 kb on - strand at 3590.233 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 3,587,622 - +0.7 3,587,727 - -1.3 3,588,619 - +0.7 3,588,663 - -0.3 3,588,674 - NOLOHH_18265 0.11 -0.6 3,588,674 - NOLOHH_18265 0.11 -0.9 3,588,674 - NOLOHH_18265 0.11 +1.3 3,589,080 - NOLOHH_18265 0.59 +0.7 3,589,374 - +1.1 3,589,374 - +0.7 3,590,182 - +0.7 3,590,233 - -0.3
Or see this region's nucleotide sequence