Strain Fitness in Escherichia coli ECOR27 around NOLOHH_12075

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
2,340,880	-				+0.6
2,340,880	-				-1.4
2,340,884	+				-0.4
2,340,990	+				+1.1
2,340,993	+				+1.1
2,341,032	+				+0.3
2,341,033	-				-0.4
2,341,035	-	queF	NOLOHH_12070	0.10	-0.2
2,341,035	-	queF	NOLOHH_12070	0.10	+0.1
2,341,035	-	queF	NOLOHH_12070	0.10	-2.9
2,341,075	+	queF	NOLOHH_12070	0.15	+1.1
2,341,301	+	queF	NOLOHH_12070	0.41	+1.6
2,341,302	-	queF	NOLOHH_12070	0.42	+0.1
2,341,308	+	queF	NOLOHH_12070	0.42	+1.6
2,341,319	+	queF	NOLOHH_12070	0.44	+0.3
2,341,319	+	queF	NOLOHH_12070	0.44	-0.3
2,341,319	+	queF	NOLOHH_12070	0.44	-1.0
2,341,320	-	queF	NOLOHH_12070	0.44	-0.4
2,341,320	-	queF	NOLOHH_12070	0.44	+0.4
2,341,320	-	queF	NOLOHH_12070	0.44	+0.1
2,341,404	-	queF	NOLOHH_12070	0.54	+0.6
2,341,404	-	queF	NOLOHH_12070	0.54	+0.6
2,341,404	-	queF	NOLOHH_12070	0.54	+0.3
2,341,405	+	queF	NOLOHH_12070	0.54	-1.4
2,341,406	-	queF	NOLOHH_12070	0.54	-0.4
2,341,406	-	queF	NOLOHH_12070	0.54	-1.6
2,341,422	+	queF	NOLOHH_12070	0.56	-1.1
2,341,441	+	queF	NOLOHH_12070	0.58	-1.4
2,341,441	+	queF	NOLOHH_12070	0.58	+1.1
2,341,442	-	queF	NOLOHH_12070	0.58	-0.8
2,341,442	-	queF	NOLOHH_12070	0.58	+0.3
2,341,482	+	queF	NOLOHH_12070	0.63	+0.1
2,341,482	+	queF	NOLOHH_12070	0.63	+1.6
2,341,483	-	queF	NOLOHH_12070	0.63	+0.1
2,341,483	-	queF	NOLOHH_12070	0.63	-0.9
2,341,483	-	queF	NOLOHH_12070	0.63	-1.0
2,341,512	-	queF	NOLOHH_12070	0.66	-0.2
2,341,512	-	queF	NOLOHH_12070	0.66	+1.0
2,341,518	+	queF	NOLOHH_12070	0.67	+2.0
2,341,544	-	queF	NOLOHH_12070	0.70	-0.4
2,341,553	+	queF	NOLOHH_12070	0.71	-0.4
2,341,553	+	queF	NOLOHH_12070	0.71	-0.2
2,341,554	-	queF	NOLOHH_12070	0.71	+1.0
2,341,554	-	queF	NOLOHH_12070	0.71	+0.6
2,341,554	-	queF	NOLOHH_12070	0.71	-0.4
2,341,554	-	queF	NOLOHH_12070	0.71	-1.4
2,341,725	-				-0.4
2,341,825	-				+0.2
2,341,825	-				-0.2
2,341,837	+				+0.7
2,341,837	+				+0.0
2,341,837	+				+0.0
2,341,837	+				-1.0
2,341,837	+				+0.9
2,341,837	+				-0.7
2,341,846	+				+0.6
2,341,846	+				+0.0
2,341,864	-				+0.0
2,341,864	-				-1.2
2,341,900	+				-1.0
2,341,936	+	syd	NOLOHH_12075	0.13	+0.9
2,341,936	+	syd	NOLOHH_12075	0.13	-0.4
2,341,936	+	syd	NOLOHH_12075	0.13	-1.0
2,341,937	-	syd	NOLOHH_12075	0.13	+1.3
2,341,988	-	syd	NOLOHH_12075	0.23	+0.6
2,341,996	+	syd	NOLOHH_12075	0.24	+1.6
2,341,997	-	syd	NOLOHH_12075	0.24	+0.3
2,342,010	+	syd	NOLOHH_12075	0.27	+0.1
2,342,010	+	syd	NOLOHH_12075	0.27	-0.6
2,342,010	+	syd	NOLOHH_12075	0.27	-1.1
2,342,011	-	syd	NOLOHH_12075	0.27	-0.0
2,342,013	-	syd	NOLOHH_12075	0.27	+0.8
2,342,013	-	syd	NOLOHH_12075	0.27	-2.0
2,342,013	-	syd	NOLOHH_12075	0.27	+1.0
2,342,083	-	syd	NOLOHH_12075	0.40	-0.3
2,342,105	+	syd	NOLOHH_12075	0.44	+0.8
2,342,106	-	syd	NOLOHH_12075	0.44	-0.1
2,342,106	-	syd	NOLOHH_12075	0.44	+0.2
2,342,108	-	syd	NOLOHH_12075	0.45	+0.3
2,342,259	+	syd	NOLOHH_12075	0.72	-1.6
2,342,260	-	syd	NOLOHH_12075	0.72	-1.3
2,342,260	-	syd	NOLOHH_12075	0.72	-1.0
2,342,263	+	syd	NOLOHH_12075	0.73	-1.3
2,342,264	-	syd	NOLOHH_12075	0.73	+2.1
2,342,264	-	syd	NOLOHH_12075	0.73	-0.4
2,342,286	+	syd	NOLOHH_12075	0.77	-0.8
2,342,287	-	syd	NOLOHH_12075	0.77	+0.3
2,342,347	+	syd	NOLOHH_12075	0.88	+0.3
2,342,347	+	syd	NOLOHH_12075	0.88	-0.4
2,342,348	-	syd	NOLOHH_12075	0.88	-0.0
2,342,362	-				-0.9
2,342,396	-				+0.3
2,342,417	+				-0.3
2,342,418	-				-0.6
2,342,589	+				+0.1
2,342,615	-				-0.6
2,342,615	-				+0.4
2,342,826	+				-0.7
2,342,826	+				-1.8
2,342,858	+				-1.3
2,342,968	+				+0.3
2,342,968	+				-0.1
2,342,987	-				+0.6
2,343,031	+				+2.1
2,343,133	+	yqcC	NOLOHH_12085	0.31	-1.3
2,343,134	-	yqcC	NOLOHH_12085	0.31	+0.1
2,343,134	-	yqcC	NOLOHH_12085	0.31	-0.9
2,343,139	+	yqcC	NOLOHH_12085	0.32	-0.3
2,343,139	+	yqcC	NOLOHH_12085	0.32	+1.6
2,343,219	+	yqcC	NOLOHH_12085	0.57	-0.7
2,343,219	+	yqcC	NOLOHH_12085	0.57	-1.0
2,343,219	+	yqcC	NOLOHH_12085	0.57	-1.0
2,343,263	+	yqcC	NOLOHH_12085	0.70	+0.6
2,343,264	-	yqcC	NOLOHH_12085	0.70	+0.6
2,343,359	+				-0.7
2,343,359	+				+0.4
2,343,359	+				+0.4
2,343,359	+				-0.9
2,343,359	+				-0.2
2,343,371	+				-2.0
2,343,371	+				-0.0
2,343,371	+				+0.6
2,343,371	+				+0.4
2,343,372	-				+1.6
2,343,372	-				-1.2
2,343,372	-				-2.6
2,343,372	-				-1.0
2,343,372	-				-1.4
2,343,372	-				-1.0
2,343,372	-				-0.9
2,343,402	-				-1.9
2,343,406	-				+0.1