Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yiiE and NOLOHH_06110 are separated by 426 nucleotides NOLOHH_06110 and NOLOHH_06115 are separated by 85 nucleotides NOLOHH_06115 and NOLOHH_06120 are separated by 0 nucleotides NOLOHH_06120 and NOLOHH_06125 are separated by 228 nucleotides
NOLOHH_06105: yiiE - Uncharacterized protein YiiE, at 1,150,275 to 1,150,493
yiiE
NOLOHH_06110: NOLOHH_06110 - hypothetical protein, at 1,150,920 to 1,151,012
_06110
NOLOHH_06115: NOLOHH_06115 - transcriptional regulator, at 1,151,098 to 1,151,388
_06115
NOLOHH_06120: NOLOHH_06120 - Toxin HigB-2, at 1,151,389 to 1,151,700
_06120
NOLOHH_06125: NOLOHH_06125 - alpha/beta hydrolase, at 1,151,929 to 1,152,837
_06125
Position (kb)
1151
1152 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1150.418 kb on + strand, within yiiE at 1150.505 kb on + strand at 1150.509 kb on + strand at 1150.509 kb on + strand at 1150.511 kb on + strand at 1150.512 kb on - strand at 1150.686 kb on + strand at 1150.692 kb on + strand at 1150.693 kb on - strand at 1150.694 kb on + strand at 1150.698 kb on - strand at 1150.755 kb on - strand at 1150.776 kb on + strand at 1150.792 kb on + strand at 1150.804 kb on - strand at 1150.829 kb on - strand at 1150.849 kb on - strand at 1150.980 kb on - strand, within NOLOHH_06110 at 1150.980 kb on - strand, within NOLOHH_06110 at 1151.013 kb on - strand at 1151.013 kb on - strand at 1151.069 kb on - strand at 1151.069 kb on - strand at 1151.087 kb on + strand at 1151.106 kb on + strand at 1151.200 kb on - strand, within NOLOHH_06115 at 1151.241 kb on + strand, within NOLOHH_06115 at 1151.242 kb on - strand, within NOLOHH_06115 at 1151.390 kb on + strand at 1151.390 kb on + strand at 1151.391 kb on - strand at 1151.391 kb on - strand at 1151.404 kb on + strand at 1151.405 kb on - strand at 1151.405 kb on - strand at 1151.462 kb on + strand, within NOLOHH_06120 at 1151.466 kb on + strand, within NOLOHH_06120 at 1151.467 kb on - strand, within NOLOHH_06120 at 1151.486 kb on + strand, within NOLOHH_06120 at 1151.486 kb on + strand, within NOLOHH_06120 at 1151.486 kb on + strand, within NOLOHH_06120 at 1151.507 kb on + strand, within NOLOHH_06120 at 1151.507 kb on + strand, within NOLOHH_06120 at 1151.508 kb on - strand, within NOLOHH_06120 at 1151.508 kb on - strand, within NOLOHH_06120 at 1151.584 kb on + strand, within NOLOHH_06120 at 1151.585 kb on - strand, within NOLOHH_06120 at 1151.587 kb on + strand, within NOLOHH_06120 at 1151.587 kb on + strand, within NOLOHH_06120 at 1151.588 kb on - strand, within NOLOHH_06120 at 1151.588 kb on - strand, within NOLOHH_06120 at 1151.597 kb on + strand, within NOLOHH_06120 at 1151.597 kb on + strand, within NOLOHH_06120 at 1151.598 kb on - strand, within NOLOHH_06120 at 1151.598 kb on - strand, within NOLOHH_06120 at 1151.767 kb on + strand at 1151.767 kb on + strand at 1151.767 kb on + strand at 1151.768 kb on - strand at 1151.768 kb on - strand at 1151.768 kb on - strand at 1151.779 kb on - strand at 1151.918 kb on + strand at 1151.925 kb on + strand at 1151.925 kb on + strand at 1151.925 kb on + strand at 1151.925 kb on + strand at 1151.925 kb on + strand at 1151.925 kb on + strand at 1151.925 kb on + strand at 1151.925 kb on + strand at 1151.925 kb on + strand at 1151.925 kb on + strand at 1151.925 kb on + strand at 1151.925 kb on + strand at 1151.926 kb on - strand at 1151.926 kb on - strand at 1151.926 kb on - strand at 1151.926 kb on - strand at 1151.929 kb on - strand at 1152.006 kb on + strand at 1152.006 kb on + strand at 1152.028 kb on + strand, within NOLOHH_06125 at 1152.029 kb on - strand, within NOLOHH_06125 at 1152.029 kb on - strand, within NOLOHH_06125 at 1152.029 kb on - strand, within NOLOHH_06125 at 1152.029 kb on - strand, within NOLOHH_06125 at 1152.029 kb on - strand, within NOLOHH_06125 at 1152.071 kb on + strand, within NOLOHH_06125 at 1152.076 kb on - strand, within NOLOHH_06125 at 1152.113 kb on + strand, within NOLOHH_06125 at 1152.113 kb on + strand, within NOLOHH_06125 at 1152.114 kb on - strand, within NOLOHH_06125 at 1152.141 kb on - strand, within NOLOHH_06125 at 1152.152 kb on + strand, within NOLOHH_06125 at 1152.157 kb on + strand, within NOLOHH_06125 at 1152.160 kb on + strand, within NOLOHH_06125 at 1152.160 kb on + strand, within NOLOHH_06125 at 1152.161 kb on - strand, within NOLOHH_06125 at 1152.161 kb on - strand, within NOLOHH_06125 at 1152.163 kb on + strand, within NOLOHH_06125 at 1152.163 kb on + strand, within NOLOHH_06125 at 1152.164 kb on - strand, within NOLOHH_06125 at 1152.164 kb on - strand, within NOLOHH_06125 at 1152.226 kb on + strand, within NOLOHH_06125 at 1152.226 kb on + strand, within NOLOHH_06125 at 1152.227 kb on - strand, within NOLOHH_06125 at 1152.229 kb on + strand, within NOLOHH_06125 at 1152.259 kb on + strand, within NOLOHH_06125 at 1152.279 kb on + strand, within NOLOHH_06125 at 1152.279 kb on + strand, within NOLOHH_06125 at 1152.279 kb on + strand, within NOLOHH_06125 at 1152.280 kb on - strand, within NOLOHH_06125 at 1152.280 kb on - strand, within NOLOHH_06125 at 1152.280 kb on - strand, within NOLOHH_06125 at 1152.280 kb on - strand, within NOLOHH_06125 at 1152.366 kb on + strand, within NOLOHH_06125 at 1152.366 kb on + strand, within NOLOHH_06125 at 1152.366 kb on + strand, within NOLOHH_06125 at 1152.366 kb on + strand, within NOLOHH_06125 at 1152.366 kb on + strand, within NOLOHH_06125 at 1152.366 kb on + strand, within NOLOHH_06125 at 1152.367 kb on - strand, within NOLOHH_06125 at 1152.367 kb on - strand, within NOLOHH_06125 at 1152.367 kb on - strand, within NOLOHH_06125 at 1152.367 kb on - strand, within NOLOHH_06125 at 1152.367 kb on - strand, within NOLOHH_06125 at 1152.367 kb on - strand, within NOLOHH_06125 at 1152.367 kb on - strand, within NOLOHH_06125 at 1152.367 kb on - strand, within NOLOHH_06125 at 1152.367 kb on - strand, within NOLOHH_06125 at 1152.369 kb on - strand, within NOLOHH_06125 at 1152.369 kb on - strand, within NOLOHH_06125 at 1152.369 kb on - strand, within NOLOHH_06125 at 1152.464 kb on + strand, within NOLOHH_06125 at 1152.464 kb on + strand, within NOLOHH_06125 at 1152.464 kb on + strand, within NOLOHH_06125 at 1152.464 kb on + strand, within NOLOHH_06125 at 1152.470 kb on - strand, within NOLOHH_06125 at 1152.474 kb on + strand, within NOLOHH_06125 at 1152.474 kb on + strand, within NOLOHH_06125 at 1152.474 kb on + strand, within NOLOHH_06125 at 1152.475 kb on - strand, within NOLOHH_06125 at 1152.475 kb on - strand, within NOLOHH_06125 at 1152.505 kb on + strand, within NOLOHH_06125 at 1152.505 kb on + strand, within NOLOHH_06125 at 1152.506 kb on - strand, within NOLOHH_06125 at 1152.506 kb on - strand, within NOLOHH_06125 at 1152.506 kb on - strand, within NOLOHH_06125 at 1152.509 kb on + strand, within NOLOHH_06125 at 1152.509 kb on + strand, within NOLOHH_06125 at 1152.509 kb on + strand, within NOLOHH_06125 at 1152.509 kb on + strand, within NOLOHH_06125 at 1152.509 kb on + strand, within NOLOHH_06125 at 1152.509 kb on + strand, within NOLOHH_06125 at 1152.509 kb on + strand, within NOLOHH_06125 at 1152.510 kb on - strand, within NOLOHH_06125 at 1152.510 kb on - strand, within NOLOHH_06125 at 1152.510 kb on - strand, within NOLOHH_06125 at 1152.510 kb on - strand, within NOLOHH_06125 at 1152.510 kb on - strand, within NOLOHH_06125 at 1152.526 kb on + strand, within NOLOHH_06125 at 1152.526 kb on + strand, within NOLOHH_06125 at 1152.526 kb on + strand, within NOLOHH_06125 at 1152.526 kb on + strand, within NOLOHH_06125 at 1152.526 kb on + strand, within NOLOHH_06125 at 1152.527 kb on - strand, within NOLOHH_06125 at 1152.527 kb on - strand, within NOLOHH_06125 at 1152.527 kb on - strand, within NOLOHH_06125 at 1152.568 kb on + strand, within NOLOHH_06125 at 1152.568 kb on + strand, within NOLOHH_06125 at 1152.568 kb on + strand, within NOLOHH_06125 at 1152.569 kb on - strand, within NOLOHH_06125 at 1152.569 kb on - strand, within NOLOHH_06125 at 1152.569 kb on - strand, within NOLOHH_06125 at 1152.569 kb on - strand, within NOLOHH_06125 at 1152.644 kb on + strand, within NOLOHH_06125 at 1152.644 kb on + strand, within NOLOHH_06125 at 1152.644 kb on + strand, within NOLOHH_06125 at 1152.644 kb on + strand, within NOLOHH_06125 at 1152.644 kb on + strand, within NOLOHH_06125 at 1152.644 kb on + strand, within NOLOHH_06125 at 1152.644 kb on + strand, within NOLOHH_06125 at 1152.645 kb on - strand, within NOLOHH_06125 at 1152.645 kb on - strand, within NOLOHH_06125 at 1152.645 kb on - strand, within NOLOHH_06125 at 1152.645 kb on - strand, within NOLOHH_06125 at 1152.645 kb on - strand, within NOLOHH_06125 at 1152.645 kb on - strand, within NOLOHH_06125 at 1152.645 kb on - strand, within NOLOHH_06125 at 1152.645 kb on - strand, within NOLOHH_06125 at 1152.645 kb on - strand, within NOLOHH_06125 at 1152.648 kb on + strand, within NOLOHH_06125 at 1152.648 kb on + strand, within NOLOHH_06125 at 1152.648 kb on + strand, within NOLOHH_06125 at 1152.648 kb on + strand, within NOLOHH_06125 at 1152.648 kb on + strand, within NOLOHH_06125 at 1152.648 kb on + strand, within NOLOHH_06125 at 1152.648 kb on + strand, within NOLOHH_06125 at 1152.648 kb on + strand, within NOLOHH_06125 at 1152.648 kb on + strand, within NOLOHH_06125 at 1152.648 kb on + strand, within NOLOHH_06125 at 1152.649 kb on - strand, within NOLOHH_06125 at 1152.649 kb on - strand, within NOLOHH_06125 at 1152.649 kb on - strand, within NOLOHH_06125 at 1152.649 kb on - strand, within NOLOHH_06125 at 1152.649 kb on - strand, within NOLOHH_06125 at 1152.649 kb on - strand, within NOLOHH_06125 at 1152.649 kb on - strand, within NOLOHH_06125 at 1152.649 kb on - strand, within NOLOHH_06125 at 1152.697 kb on + strand, within NOLOHH_06125 at 1152.698 kb on - strand, within NOLOHH_06125 at 1152.698 kb on - strand, within NOLOHH_06125
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 1,150,418 + yiiE NOLOHH_06105 0.65 +0.5 1,150,505 + -0.4 1,150,509 + +0.2 1,150,509 + -0.3 1,150,511 + +1.5 1,150,512 - -0.1 1,150,686 + +0.1 1,150,692 + -0.2 1,150,693 - +0.2 1,150,694 + -0.4 1,150,698 - +0.2 1,150,755 - +0.7 1,150,776 + -0.1 1,150,792 + -0.2 1,150,804 - +0.2 1,150,829 - +0.1 1,150,849 - +0.6 1,150,980 - NOLOHH_06110 0.65 -0.7 1,150,980 - NOLOHH_06110 0.65 -0.1 1,151,013 - +0.2 1,151,013 - +0.9 1,151,069 - -1.1 1,151,069 - +0.5 1,151,087 + -0.1 1,151,106 + +0.6 1,151,200 - NOLOHH_06115 0.35 -0.2 1,151,241 + NOLOHH_06115 0.49 -0.1 1,151,242 - NOLOHH_06115 0.49 -2.3 1,151,390 + -1.5 1,151,390 + +0.5 1,151,391 - -1.3 1,151,391 - -0.5 1,151,404 + -1.2 1,151,405 - +1.7 1,151,405 - +0.1 1,151,462 + NOLOHH_06120 0.23 -0.5 1,151,466 + NOLOHH_06120 0.25 +0.2 1,151,467 - NOLOHH_06120 0.25 -0.1 1,151,486 + NOLOHH_06120 0.31 -0.3 1,151,486 + NOLOHH_06120 0.31 +0.7 1,151,486 + NOLOHH_06120 0.31 +0.8 1,151,507 + NOLOHH_06120 0.38 +0.6 1,151,507 + NOLOHH_06120 0.38 +0.7 1,151,508 - NOLOHH_06120 0.38 -0.4 1,151,508 - NOLOHH_06120 0.38 +0.0 1,151,584 + NOLOHH_06120 0.62 +0.0 1,151,585 - NOLOHH_06120 0.63 +0.7 1,151,587 + NOLOHH_06120 0.63 +0.5 1,151,587 + NOLOHH_06120 0.63 -1.4 1,151,588 - NOLOHH_06120 0.64 -1.1 1,151,588 - NOLOHH_06120 0.64 -0.3 1,151,597 + NOLOHH_06120 0.67 -0.1 1,151,597 + NOLOHH_06120 0.67 +0.2 1,151,598 - NOLOHH_06120 0.67 +0.3 1,151,598 - NOLOHH_06120 0.67 -1.0 1,151,767 + -0.6 1,151,767 + -0.7 1,151,767 + +0.5 1,151,768 - +0.4 1,151,768 - -0.8 1,151,768 - +0.0 1,151,779 - -0.2 1,151,918 + -0.3 1,151,925 + -0.3 1,151,925 + +2.8 1,151,925 + +0.8 1,151,925 + -0.5 1,151,925 + -1.7 1,151,925 + -0.5 1,151,925 + +0.1 1,151,925 + +0.8 1,151,925 + +0.6 1,151,925 + +1.9 1,151,925 + +0.1 1,151,925 + +0.5 1,151,926 - -0.3 1,151,926 - -0.5 1,151,926 - -0.3 1,151,926 - -0.1 1,151,929 - +0.7 1,152,006 + -0.8 1,152,006 + -0.5 1,152,028 + NOLOHH_06125 0.11 -0.5 1,152,029 - NOLOHH_06125 0.11 +0.2 1,152,029 - NOLOHH_06125 0.11 +0.6 1,152,029 - NOLOHH_06125 0.11 -2.0 1,152,029 - NOLOHH_06125 0.11 +1.0 1,152,029 - NOLOHH_06125 0.11 -1.1 1,152,071 + NOLOHH_06125 0.16 -1.7 1,152,076 - NOLOHH_06125 0.16 +0.0 1,152,113 + NOLOHH_06125 0.20 -0.5 1,152,113 + NOLOHH_06125 0.20 -0.4 1,152,114 - NOLOHH_06125 0.20 -0.2 1,152,141 - NOLOHH_06125 0.23 +0.7 1,152,152 + NOLOHH_06125 0.25 +0.8 1,152,157 + NOLOHH_06125 0.25 +1.5 1,152,160 + NOLOHH_06125 0.25 -0.5 1,152,160 + NOLOHH_06125 0.25 -0.4 1,152,161 - NOLOHH_06125 0.26 +0.0 1,152,161 - NOLOHH_06125 0.26 -0.3 1,152,163 + NOLOHH_06125 0.26 -0.3 1,152,163 + NOLOHH_06125 0.26 -1.3 1,152,164 - NOLOHH_06125 0.26 -0.5 1,152,164 - NOLOHH_06125 0.26 +0.3 1,152,226 + NOLOHH_06125 0.33 +0.5 1,152,226 + NOLOHH_06125 0.33 -0.4 1,152,227 - NOLOHH_06125 0.33 +0.5 1,152,229 + NOLOHH_06125 0.33 -0.0 1,152,259 + NOLOHH_06125 0.36 -1.4 1,152,279 + NOLOHH_06125 0.39 -0.7 1,152,279 + NOLOHH_06125 0.39 -0.7 1,152,279 + NOLOHH_06125 0.39 -1.3 1,152,280 - NOLOHH_06125 0.39 -1.1 1,152,280 - NOLOHH_06125 0.39 -0.8 1,152,280 - NOLOHH_06125 0.39 +0.3 1,152,280 - NOLOHH_06125 0.39 -2.3 1,152,366 + NOLOHH_06125 0.48 -0.4 1,152,366 + NOLOHH_06125 0.48 +0.2 1,152,366 + NOLOHH_06125 0.48 -1.1 1,152,366 + NOLOHH_06125 0.48 +3.3 1,152,366 + NOLOHH_06125 0.48 -0.1 1,152,366 + NOLOHH_06125 0.48 +0.9 1,152,367 - NOLOHH_06125 0.48 -0.4 1,152,367 - NOLOHH_06125 0.48 +0.9 1,152,367 - NOLOHH_06125 0.48 -0.7 1,152,367 - NOLOHH_06125 0.48 +0.2 1,152,367 - NOLOHH_06125 0.48 +0.5 1,152,367 - NOLOHH_06125 0.48 -0.9 1,152,367 - NOLOHH_06125 0.48 -0.5 1,152,367 - NOLOHH_06125 0.48 +2.3 1,152,367 - NOLOHH_06125 0.48 -1.1 1,152,369 - NOLOHH_06125 0.48 -2.1 1,152,369 - NOLOHH_06125 0.48 -1.0 1,152,369 - NOLOHH_06125 0.48 -0.1 1,152,464 + NOLOHH_06125 0.59 +0.1 1,152,464 + NOLOHH_06125 0.59 -1.0 1,152,464 + NOLOHH_06125 0.59 -0.3 1,152,464 + NOLOHH_06125 0.59 +1.0 1,152,470 - NOLOHH_06125 0.60 -1.5 1,152,474 + NOLOHH_06125 0.60 +0.8 1,152,474 + NOLOHH_06125 0.60 -0.3 1,152,474 + NOLOHH_06125 0.60 +0.9 1,152,475 - NOLOHH_06125 0.60 -0.1 1,152,475 - NOLOHH_06125 0.60 +0.9 1,152,505 + NOLOHH_06125 0.63 +0.3 1,152,505 + NOLOHH_06125 0.63 +0.1 1,152,506 - NOLOHH_06125 0.63 +0.9 1,152,506 - NOLOHH_06125 0.63 -0.5 1,152,506 - NOLOHH_06125 0.63 +0.8 1,152,509 + NOLOHH_06125 0.64 -1.0 1,152,509 + NOLOHH_06125 0.64 -0.5 1,152,509 + NOLOHH_06125 0.64 -0.5 1,152,509 + NOLOHH_06125 0.64 -0.4 1,152,509 + NOLOHH_06125 0.64 -0.4 1,152,509 + NOLOHH_06125 0.64 +0.9 1,152,509 + NOLOHH_06125 0.64 -0.8 1,152,510 - NOLOHH_06125 0.64 -0.6 1,152,510 - NOLOHH_06125 0.64 -0.1 1,152,510 - NOLOHH_06125 0.64 +0.5 1,152,510 - NOLOHH_06125 0.64 +1.3 1,152,510 - NOLOHH_06125 0.64 -0.1 1,152,526 + NOLOHH_06125 0.66 +1.0 1,152,526 + NOLOHH_06125 0.66 -0.5 1,152,526 + NOLOHH_06125 0.66 -0.7 1,152,526 + NOLOHH_06125 0.66 -0.5 1,152,526 + NOLOHH_06125 0.66 -0.3 1,152,527 - NOLOHH_06125 0.66 -0.5 1,152,527 - NOLOHH_06125 0.66 -0.1 1,152,527 - NOLOHH_06125 0.66 +0.7 1,152,568 + NOLOHH_06125 0.70 +0.7 1,152,568 + NOLOHH_06125 0.70 -0.1 1,152,568 + NOLOHH_06125 0.70 +0.1 1,152,569 - NOLOHH_06125 0.70 -1.1 1,152,569 - NOLOHH_06125 0.70 -0.2 1,152,569 - NOLOHH_06125 0.70 +1.2 1,152,569 - NOLOHH_06125 0.70 -1.3 1,152,644 + NOLOHH_06125 0.79 +0.3 1,152,644 + NOLOHH_06125 0.79 -0.5 1,152,644 + NOLOHH_06125 0.79 +0.8 1,152,644 + NOLOHH_06125 0.79 -1.4 1,152,644 + NOLOHH_06125 0.79 +0.3 1,152,644 + NOLOHH_06125 0.79 -2.4 1,152,644 + NOLOHH_06125 0.79 -0.1 1,152,645 - NOLOHH_06125 0.79 -0.3 1,152,645 - NOLOHH_06125 0.79 -0.7 1,152,645 - NOLOHH_06125 0.79 -0.4 1,152,645 - NOLOHH_06125 0.79 +0.5 1,152,645 - NOLOHH_06125 0.79 -2.0 1,152,645 - NOLOHH_06125 0.79 -0.1 1,152,645 - NOLOHH_06125 0.79 +1.2 1,152,645 - NOLOHH_06125 0.79 +0.8 1,152,645 - NOLOHH_06125 0.79 +1.2 1,152,648 + NOLOHH_06125 0.79 -0.5 1,152,648 + NOLOHH_06125 0.79 -0.3 1,152,648 + NOLOHH_06125 0.79 -0.7 1,152,648 + NOLOHH_06125 0.79 -0.0 1,152,648 + NOLOHH_06125 0.79 -0.1 1,152,648 + NOLOHH_06125 0.79 +1.0 1,152,648 + NOLOHH_06125 0.79 +0.9 1,152,648 + NOLOHH_06125 0.79 +0.0 1,152,648 + NOLOHH_06125 0.79 -0.6 1,152,648 + NOLOHH_06125 0.79 +0.5 1,152,649 - NOLOHH_06125 0.79 +2.3 1,152,649 - NOLOHH_06125 0.79 -0.5 1,152,649 - NOLOHH_06125 0.79 +0.1 1,152,649 - NOLOHH_06125 0.79 -0.7 1,152,649 - NOLOHH_06125 0.79 -0.1 1,152,649 - NOLOHH_06125 0.79 -0.5 1,152,649 - NOLOHH_06125 0.79 -1.1 1,152,649 - NOLOHH_06125 0.79 +0.0 1,152,697 + NOLOHH_06125 0.84 -1.5 1,152,698 - NOLOHH_06125 0.85 +0.9 1,152,698 - NOLOHH_06125 0.85 +0.5
Or see this region's nucleotide sequence