Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NOLOHH_00095 and NOLOHH_00100 are separated by 623 nucleotides NOLOHH_00100 and NOLOHH_00105 are separated by 88 nucleotides NOLOHH_00105 and NOLOHH_00110 are separated by 190 nucleotides
NOLOHH_00095: NOLOHH_00095 - DUF192 domain-containing protein, at 8,356 to 8,775
_00095
NOLOHH_00100: NOLOHH_00100 - CcgD protein (CUP-controlled regulon), at 9,399 to 9,668
_00100
NOLOHH_00105: NOLOHH_00105 - hypothetical protein, at 9,757 to 9,972
_00105
NOLOHH_00110: NOLOHH_00110 - DUF945 domain-containing protein, at 10,163 to 10,987
_00110
Position (kb)
9
10 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 8.447 kb on + strand, within NOLOHH_00095 at 8.447 kb on + strand, within NOLOHH_00095 at 8.447 kb on + strand, within NOLOHH_00095 at 8.447 kb on + strand, within NOLOHH_00095 at 8.447 kb on + strand, within NOLOHH_00095 at 8.451 kb on + strand, within NOLOHH_00095 at 8.451 kb on + strand, within NOLOHH_00095 at 8.451 kb on + strand, within NOLOHH_00095 at 8.451 kb on + strand, within NOLOHH_00095 at 8.456 kb on + strand, within NOLOHH_00095 at 8.493 kb on + strand, within NOLOHH_00095 at 8.493 kb on + strand, within NOLOHH_00095 at 8.493 kb on + strand, within NOLOHH_00095 at 8.493 kb on + strand, within NOLOHH_00095 at 8.586 kb on + strand, within NOLOHH_00095 at 8.625 kb on + strand, within NOLOHH_00095 at 8.669 kb on + strand, within NOLOHH_00095 at 8.669 kb on + strand, within NOLOHH_00095 at 8.669 kb on + strand, within NOLOHH_00095 at 8.669 kb on + strand, within NOLOHH_00095 at 8.773 kb on + strand at 8.849 kb on + strand at 8.889 kb on + strand at 8.889 kb on + strand at 9.255 kb on + strand at 9.314 kb on - strand at 9.480 kb on + strand, within NOLOHH_00100 at 9.480 kb on + strand, within NOLOHH_00100 at 9.480 kb on + strand, within NOLOHH_00100 at 9.480 kb on + strand, within NOLOHH_00100 at 9.481 kb on - strand, within NOLOHH_00100 at 9.481 kb on - strand, within NOLOHH_00100 at 9.481 kb on - strand, within NOLOHH_00100 at 9.481 kb on - strand, within NOLOHH_00100 at 9.481 kb on - strand, within NOLOHH_00100 at 9.481 kb on - strand, within NOLOHH_00100 at 9.481 kb on - strand, within NOLOHH_00100 at 9.481 kb on - strand, within NOLOHH_00100 at 9.481 kb on - strand, within NOLOHH_00100 at 9.523 kb on + strand, within NOLOHH_00100 at 9.526 kb on + strand, within NOLOHH_00100 at 9.526 kb on + strand, within NOLOHH_00100 at 9.527 kb on - strand, within NOLOHH_00100 at 9.527 kb on - strand, within NOLOHH_00100 at 9.551 kb on + strand, within NOLOHH_00100 at 9.552 kb on - strand, within NOLOHH_00100 at 9.581 kb on + strand, within NOLOHH_00100 at 9.581 kb on + strand, within NOLOHH_00100 at 9.581 kb on + strand, within NOLOHH_00100 at 9.581 kb on + strand, within NOLOHH_00100 at 9.582 kb on - strand, within NOLOHH_00100 at 9.585 kb on + strand, within NOLOHH_00100 at 9.585 kb on + strand, within NOLOHH_00100 at 9.585 kb on + strand, within NOLOHH_00100 at 9.585 kb on + strand, within NOLOHH_00100 at 9.586 kb on - strand, within NOLOHH_00100 at 9.586 kb on - strand, within NOLOHH_00100 at 9.586 kb on - strand, within NOLOHH_00100 at 9.586 kb on - strand, within NOLOHH_00100 at 9.607 kb on + strand, within NOLOHH_00100 at 9.607 kb on + strand, within NOLOHH_00100 at 9.608 kb on - strand, within NOLOHH_00100 at 9.608 kb on - strand, within NOLOHH_00100 at 9.613 kb on + strand, within NOLOHH_00100 at 9.613 kb on + strand, within NOLOHH_00100 at 9.672 kb on + strand at 9.673 kb on - strand at 9.673 kb on - strand at 9.674 kb on + strand at 9.675 kb on - strand at 9.688 kb on + strand at 9.688 kb on + strand at 9.744 kb on + strand at 9.744 kb on + strand at 9.744 kb on + strand at 9.754 kb on - strand at 9.756 kb on + strand at 9.756 kb on + strand at 9.756 kb on + strand at 9.756 kb on + strand at 9.756 kb on + strand at 9.756 kb on + strand at 9.756 kb on + strand at 9.756 kb on + strand at 9.756 kb on + strand at 9.757 kb on - strand at 9.757 kb on - strand at 9.757 kb on - strand at 9.757 kb on - strand at 9.757 kb on - strand at 9.757 kb on - strand at 9.757 kb on - strand at 9.764 kb on + strand at 9.765 kb on - strand at 9.781 kb on - strand, within NOLOHH_00105 at 9.792 kb on + strand, within NOLOHH_00105 at 9.816 kb on + strand, within NOLOHH_00105 at 9.816 kb on + strand, within NOLOHH_00105 at 9.816 kb on + strand, within NOLOHH_00105 at 9.817 kb on - strand, within NOLOHH_00105 at 9.817 kb on - strand, within NOLOHH_00105 at 9.898 kb on + strand, within NOLOHH_00105 at 9.898 kb on + strand, within NOLOHH_00105 at 9.898 kb on + strand, within NOLOHH_00105 at 9.898 kb on + strand, within NOLOHH_00105 at 9.899 kb on - strand, within NOLOHH_00105 at 9.905 kb on - strand, within NOLOHH_00105 at 9.905 kb on - strand, within NOLOHH_00105 at 9.926 kb on + strand, within NOLOHH_00105 at 9.963 kb on - strand at 9.967 kb on + strand at 9.967 kb on + strand at 9.967 kb on + strand at 9.967 kb on + strand at 9.967 kb on + strand at 9.967 kb on + strand at 9.967 kb on + strand at 9.967 kb on + strand at 9.967 kb on + strand at 9.967 kb on + strand at 9.967 kb on + strand at 9.967 kb on + strand at 9.967 kb on + strand at 9.968 kb on - strand at 9.968 kb on - strand at 9.968 kb on - strand at 9.968 kb on - strand at 10.005 kb on + strand at 10.005 kb on + strand at 10.005 kb on + strand at 10.013 kb on - strand at 10.082 kb on - strand at 10.082 kb on - strand at 10.082 kb on - strand at 10.145 kb on + strand at 10.156 kb on + strand at 10.156 kb on + strand at 10.157 kb on - strand at 10.157 kb on - strand at 10.157 kb on - strand at 10.157 kb on - strand at 10.162 kb on + strand at 10.162 kb on + strand at 10.162 kb on + strand at 10.162 kb on + strand at 10.162 kb on + strand at 10.162 kb on + strand at 10.162 kb on + strand at 10.162 kb on + strand at 10.162 kb on + strand at 10.163 kb on - strand at 10.163 kb on - strand at 10.163 kb on - strand at 10.167 kb on + strand at 10.171 kb on + strand at 10.172 kb on - strand at 10.192 kb on + strand at 10.238 kb on + strand at 10.249 kb on + strand, within NOLOHH_00110 at 10.249 kb on + strand, within NOLOHH_00110 at 10.296 kb on - strand, within NOLOHH_00110 at 10.296 kb on - strand, within NOLOHH_00110 at 10.296 kb on - strand, within NOLOHH_00110 at 10.296 kb on - strand, within NOLOHH_00110 at 10.314 kb on + strand, within NOLOHH_00110 at 10.314 kb on + strand, within NOLOHH_00110 at 10.314 kb on + strand, within NOLOHH_00110 at 10.317 kb on + strand, within NOLOHH_00110 at 10.317 kb on + strand, within NOLOHH_00110 at 10.317 kb on + strand, within NOLOHH_00110 at 10.317 kb on + strand, within NOLOHH_00110 at 10.317 kb on + strand, within NOLOHH_00110 at 10.317 kb on + strand, within NOLOHH_00110 at 10.317 kb on + strand, within NOLOHH_00110 at 10.317 kb on + strand, within NOLOHH_00110 at 10.317 kb on + strand, within NOLOHH_00110 at 10.317 kb on + strand, within NOLOHH_00110 at 10.317 kb on + strand, within NOLOHH_00110 at 10.317 kb on + strand, within NOLOHH_00110 at 10.318 kb on - strand, within NOLOHH_00110 at 10.318 kb on - strand, within NOLOHH_00110 at 10.318 kb on - strand, within NOLOHH_00110 at 10.376 kb on - strand, within NOLOHH_00110 at 10.385 kb on - strand, within NOLOHH_00110 at 10.468 kb on + strand, within NOLOHH_00110 at 10.468 kb on + strand, within NOLOHH_00110 at 10.468 kb on + strand, within NOLOHH_00110 at 10.468 kb on + strand, within NOLOHH_00110 at 10.468 kb on + strand, within NOLOHH_00110 at 10.468 kb on + strand, within NOLOHH_00110 at 10.469 kb on - strand, within NOLOHH_00110 at 10.469 kb on - strand, within NOLOHH_00110 at 10.512 kb on + strand, within NOLOHH_00110 at 10.512 kb on + strand, within NOLOHH_00110 at 10.513 kb on - strand, within NOLOHH_00110 at 10.513 kb on - strand, within NOLOHH_00110 at 10.539 kb on + strand, within NOLOHH_00110 at 10.570 kb on + strand, within NOLOHH_00110 at 10.603 kb on + strand, within NOLOHH_00110 at 10.603 kb on + strand, within NOLOHH_00110 at 10.664 kb on - strand, within NOLOHH_00110
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 8,447 + NOLOHH_00095 0.22 -0.2 8,447 + NOLOHH_00095 0.22 -0.4 8,447 + NOLOHH_00095 0.22 +0.9 8,447 + NOLOHH_00095 0.22 +0.2 8,447 + NOLOHH_00095 0.22 +0.1 8,451 + NOLOHH_00095 0.23 +1.7 8,451 + NOLOHH_00095 0.23 +0.0 8,451 + NOLOHH_00095 0.23 +0.5 8,451 + NOLOHH_00095 0.23 +1.6 8,456 + NOLOHH_00095 0.24 -1.7 8,493 + NOLOHH_00095 0.33 +0.5 8,493 + NOLOHH_00095 0.33 +0.1 8,493 + NOLOHH_00095 0.33 +0.3 8,493 + NOLOHH_00095 0.33 -0.1 8,586 + NOLOHH_00095 0.55 -0.6 8,625 + NOLOHH_00095 0.64 +0.4 8,669 + NOLOHH_00095 0.75 +0.5 8,669 + NOLOHH_00095 0.75 +0.1 8,669 + NOLOHH_00095 0.75 -0.7 8,669 + NOLOHH_00095 0.75 -0.6 8,773 + -0.1 8,849 + +0.3 8,889 + -1.7 8,889 + +0.5 9,255 + +0.2 9,314 - +0.3 9,480 + NOLOHH_00100 0.30 +0.6 9,480 + NOLOHH_00100 0.30 +0.0 9,480 + NOLOHH_00100 0.30 -1.4 9,480 + NOLOHH_00100 0.30 +0.1 9,481 - NOLOHH_00100 0.30 +0.0 9,481 - NOLOHH_00100 0.30 +0.3 9,481 - NOLOHH_00100 0.30 +1.8 9,481 - NOLOHH_00100 0.30 -0.1 9,481 - NOLOHH_00100 0.30 +0.6 9,481 - NOLOHH_00100 0.30 +0.5 9,481 - NOLOHH_00100 0.30 -0.6 9,481 - NOLOHH_00100 0.30 -0.0 9,481 - NOLOHH_00100 0.30 -0.4 9,523 + NOLOHH_00100 0.46 +0.7 9,526 + NOLOHH_00100 0.47 -0.1 9,526 + NOLOHH_00100 0.47 -0.0 9,527 - NOLOHH_00100 0.47 +0.6 9,527 - NOLOHH_00100 0.47 -0.4 9,551 + NOLOHH_00100 0.56 -0.0 9,552 - NOLOHH_00100 0.57 +0.3 9,581 + NOLOHH_00100 0.67 -0.2 9,581 + NOLOHH_00100 0.67 -0.1 9,581 + NOLOHH_00100 0.67 +0.7 9,581 + NOLOHH_00100 0.67 -0.3 9,582 - NOLOHH_00100 0.68 +0.2 9,585 + NOLOHH_00100 0.69 +0.7 9,585 + NOLOHH_00100 0.69 +0.6 9,585 + NOLOHH_00100 0.69 -0.4 9,585 + NOLOHH_00100 0.69 +0.1 9,586 - NOLOHH_00100 0.69 +0.4 9,586 - NOLOHH_00100 0.69 +0.8 9,586 - NOLOHH_00100 0.69 +0.2 9,586 - NOLOHH_00100 0.69 -0.8 9,607 + NOLOHH_00100 0.77 -1.0 9,607 + NOLOHH_00100 0.77 +0.3 9,608 - NOLOHH_00100 0.77 +0.5 9,608 - NOLOHH_00100 0.77 -1.1 9,613 + NOLOHH_00100 0.79 -0.2 9,613 + NOLOHH_00100 0.79 +0.4 9,672 + -0.4 9,673 - +0.3 9,673 - -0.2 9,674 + -0.1 9,675 - +0.1 9,688 + +0.6 9,688 + -0.4 9,744 + -0.3 9,744 + -0.3 9,744 + +0.3 9,754 - +0.3 9,756 + -0.7 9,756 + +0.3 9,756 + -0.4 9,756 + +0.3 9,756 + -0.0 9,756 + -0.0 9,756 + +0.3 9,756 + +1.5 9,756 + -0.3 9,757 - +0.7 9,757 - +1.7 9,757 - +0.5 9,757 - -0.1 9,757 - +0.7 9,757 - +0.2 9,757 - +0.7 9,764 + +0.2 9,765 - -0.6 9,781 - NOLOHH_00105 0.11 +0.9 9,792 + NOLOHH_00105 0.16 +0.4 9,816 + NOLOHH_00105 0.27 -0.4 9,816 + NOLOHH_00105 0.27 -0.4 9,816 + NOLOHH_00105 0.27 -0.3 9,817 - NOLOHH_00105 0.28 +0.7 9,817 - NOLOHH_00105 0.28 +0.2 9,898 + NOLOHH_00105 0.65 -1.9 9,898 + NOLOHH_00105 0.65 -0.1 9,898 + NOLOHH_00105 0.65 +0.2 9,898 + NOLOHH_00105 0.65 -0.8 9,899 - NOLOHH_00105 0.66 -0.2 9,905 - NOLOHH_00105 0.69 +0.3 9,905 - NOLOHH_00105 0.69 +0.4 9,926 + NOLOHH_00105 0.78 -0.2 9,963 - +0.5 9,967 + -0.1 9,967 + +0.2 9,967 + +0.5 9,967 + -1.0 9,967 + -0.4 9,967 + -0.7 9,967 + -0.0 9,967 + +0.2 9,967 + +0.1 9,967 + +0.3 9,967 + +0.1 9,967 + +0.3 9,967 + +1.4 9,968 - -0.5 9,968 - -0.1 9,968 - +0.2 9,968 - +0.2 10,005 + -0.5 10,005 + +0.1 10,005 + +1.5 10,013 - +1.0 10,082 - -1.5 10,082 - -0.7 10,082 - +0.4 10,145 + +0.1 10,156 + -0.1 10,156 + +0.5 10,157 - +0.4 10,157 - -0.2 10,157 - -1.8 10,157 - -0.2 10,162 + +0.8 10,162 + -0.8 10,162 + -0.3 10,162 + +0.4 10,162 + +0.1 10,162 + -0.7 10,162 + +1.1 10,162 + -1.3 10,162 + -0.3 10,163 - -0.7 10,163 - -0.7 10,163 - -1.6 10,167 + +0.6 10,171 + -0.5 10,172 - -0.0 10,192 + -0.8 10,238 + -0.4 10,249 + NOLOHH_00110 0.10 -0.4 10,249 + NOLOHH_00110 0.10 +0.2 10,296 - NOLOHH_00110 0.16 +0.2 10,296 - NOLOHH_00110 0.16 +0.4 10,296 - NOLOHH_00110 0.16 -0.0 10,296 - NOLOHH_00110 0.16 -0.1 10,314 + NOLOHH_00110 0.18 +0.3 10,314 + NOLOHH_00110 0.18 -1.2 10,314 + NOLOHH_00110 0.18 +0.7 10,317 + NOLOHH_00110 0.19 +0.3 10,317 + NOLOHH_00110 0.19 -0.4 10,317 + NOLOHH_00110 0.19 -0.2 10,317 + NOLOHH_00110 0.19 -1.0 10,317 + NOLOHH_00110 0.19 +0.2 10,317 + NOLOHH_00110 0.19 -0.1 10,317 + NOLOHH_00110 0.19 -0.7 10,317 + NOLOHH_00110 0.19 -1.0 10,317 + NOLOHH_00110 0.19 +0.7 10,317 + NOLOHH_00110 0.19 -0.2 10,317 + NOLOHH_00110 0.19 +1.0 10,317 + NOLOHH_00110 0.19 +1.4 10,318 - NOLOHH_00110 0.19 -0.9 10,318 - NOLOHH_00110 0.19 +0.8 10,318 - NOLOHH_00110 0.19 -0.1 10,376 - NOLOHH_00110 0.26 +1.7 10,385 - NOLOHH_00110 0.27 +1.2 10,468 + NOLOHH_00110 0.37 -0.3 10,468 + NOLOHH_00110 0.37 -0.6 10,468 + NOLOHH_00110 0.37 -0.3 10,468 + NOLOHH_00110 0.37 -0.5 10,468 + NOLOHH_00110 0.37 -0.1 10,468 + NOLOHH_00110 0.37 +0.1 10,469 - NOLOHH_00110 0.37 +0.0 10,469 - NOLOHH_00110 0.37 -1.1 10,512 + NOLOHH_00110 0.42 -0.4 10,512 + NOLOHH_00110 0.42 +0.2 10,513 - NOLOHH_00110 0.42 +0.5 10,513 - NOLOHH_00110 0.42 +0.2 10,539 + NOLOHH_00110 0.46 +0.4 10,570 + NOLOHH_00110 0.49 +0.5 10,603 + NOLOHH_00110 0.53 -0.3 10,603 + NOLOHH_00110 0.53 +0.1 10,664 - NOLOHH_00110 0.61 +0.9
Or see this region's nucleotide sequence