Strain Fitness in Escherichia coli ECOR27 around NOLOHH_13245

Experiment: TP12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TP12
2,566,723	+	hcaB	NOLOHH_13235	0.37	-0.6
2,566,723	+	hcaB	NOLOHH_13235	0.37	-0.1
2,566,740	-	hcaB	NOLOHH_13235	0.39	-0.1
2,566,771	+	hcaB	NOLOHH_13235	0.43	-0.1
2,566,941	-	hcaB	NOLOHH_13235	0.63	-0.2
2,566,941	-	hcaB	NOLOHH_13235	0.63	+1.5
2,566,941	-	hcaB	NOLOHH_13235	0.63	+0.4
2,567,047	+	hcaB	NOLOHH_13235	0.77	-0.6
2,567,047	+	hcaB	NOLOHH_13235	0.77	+0.4
2,567,061	-	hcaB	NOLOHH_13235	0.78	-0.6
2,567,078	+	hcaB	NOLOHH_13235	0.80	-0.2
2,567,078	+	hcaB	NOLOHH_13235	0.80	-0.2
2,567,079	-	hcaB	NOLOHH_13235	0.80	-2.2
2,567,079	-	hcaB	NOLOHH_13235	0.80	-0.0
2,567,185	-				+2.3
2,567,208	-				-0.2
2,567,285	+	hcaC	NOLOHH_13240	0.16	-1.4
2,567,286	-	hcaC	NOLOHH_13240	0.16	+0.2
2,567,419	+	hcaC	NOLOHH_13240	0.58	+0.8
2,567,420	-	hcaC	NOLOHH_13240	0.58	-0.6
2,567,449	-	hcaC	NOLOHH_13240	0.67	-1.2
2,567,541	+				-0.2
2,567,541	+				-0.6
2,567,541	+				-1.8
2,567,542	-				+1.0
2,567,542	-				+1.3
2,567,542	-				+0.0
2,567,675	+	hcaF	NOLOHH_13245	0.23	+2.1
2,567,675	+	hcaF	NOLOHH_13245	0.23	+0.8
2,567,675	+	hcaF	NOLOHH_13245	0.23	-0.5
2,567,676	-	hcaF	NOLOHH_13245	0.24	-0.1
2,567,676	-	hcaF	NOLOHH_13245	0.24	-1.2
2,567,676	-	hcaF	NOLOHH_13245	0.24	+0.6
2,567,676	-	hcaF	NOLOHH_13245	0.24	+0.2
2,567,676	-	hcaF	NOLOHH_13245	0.24	+0.2
2,567,717	+	hcaF	NOLOHH_13245	0.31	+0.1
2,567,717	+	hcaF	NOLOHH_13245	0.31	-0.2
2,567,737	+	hcaF	NOLOHH_13245	0.35	+0.2
2,567,737	+	hcaF	NOLOHH_13245	0.35	+1.1
2,567,737	+	hcaF	NOLOHH_13245	0.35	-2.4
2,567,738	-	hcaF	NOLOHH_13245	0.35	+0.0
2,567,762	-	hcaF	NOLOHH_13245	0.40	-1.2
2,568,004	+	hcaF	NOLOHH_13245	0.87	+0.0
2,568,005	-	hcaF	NOLOHH_13245	0.87	-0.2
2,568,046	+				+1.8
2,568,046	+				-0.8
2,568,046	+				-0.2
2,568,047	-				-0.8
2,568,053	-				-1.4
2,568,157	+				-1.2
2,568,157	+				+0.3
2,568,157	+				+0.8
2,568,157	+				-0.7
2,568,158	-				+0.4
2,568,158	-				-0.6
2,568,189	-				+0.8
2,568,190	+				-0.6
2,568,190	+				-0.2
2,568,191	-				+0.0
2,568,191	-				+0.8
2,568,191	-				+1.1
2,568,194	+				-0.2
2,568,194	+				+1.2
2,568,194	+				+1.3
2,568,195	-				+0.4
2,568,195	-				-0.4
2,568,195	-				+1.8
2,568,195	-				+1.6
2,568,195	-				+1.2
2,568,197	+				+0.2
2,568,198	-				-0.5
2,568,413	+	hcaE	NOLOHH_13250	0.25	-1.2
2,568,414	-	hcaE	NOLOHH_13250	0.25	+0.6
2,568,414	-	hcaE	NOLOHH_13250	0.25	-0.8
2,568,414	-	hcaE	NOLOHH_13250	0.25	-0.9
2,568,414	-	hcaE	NOLOHH_13250	0.25	+0.1
2,568,507	-	hcaE	NOLOHH_13250	0.32	+0.6
2,568,583	+	hcaE	NOLOHH_13250	0.38	-0.0
2,568,584	-	hcaE	NOLOHH_13250	0.38	+0.8
2,568,615	-	hcaE	NOLOHH_13250	0.40	+0.8
2,568,615	-	hcaE	NOLOHH_13250	0.40	-0.2
2,568,615	-	hcaE	NOLOHH_13250	0.40	+1.8
2,568,615	-	hcaE	NOLOHH_13250	0.40	-0.2
2,568,756	+	hcaE	NOLOHH_13250	0.50	-3.1
2,568,759	+	hcaE	NOLOHH_13250	0.51	-3.1
2,568,837	-	hcaE	NOLOHH_13250	0.56	+0.2
2,568,837	-	hcaE	NOLOHH_13250	0.56	-0.6
2,568,986	+	hcaE	NOLOHH_13250	0.67	+0.3
2,568,987	-	hcaE	NOLOHH_13250	0.67	+1.2
2,568,988	+	hcaE	NOLOHH_13250	0.67	+0.5
2,568,988	+	hcaE	NOLOHH_13250	0.67	-1.0
2,568,989	-	hcaE	NOLOHH_13250	0.68	+0.0
2,568,989	-	hcaE	NOLOHH_13250	0.68	-0.8
2,568,989	-	hcaE	NOLOHH_13250	0.68	-1.2
2,568,989	-	hcaE	NOLOHH_13250	0.68	+0.8
2,569,014	+	hcaE	NOLOHH_13250	0.69	+0.4
2,569,014	+	hcaE	NOLOHH_13250	0.69	+0.8
2,569,015	-	hcaE	NOLOHH_13250	0.69	-1.5
2,569,032	-	hcaE	NOLOHH_13250	0.71	+1.8
2,569,068	+	hcaE	NOLOHH_13250	0.73	-2.6
2,569,068	+	hcaE	NOLOHH_13250	0.73	-0.2
2,569,069	-	hcaE	NOLOHH_13250	0.73	-1.1
2,569,069	-	hcaE	NOLOHH_13250	0.73	-0.9