Strain Fitness in Escherichia coli ECOR27 around NOLOHH_12460

Experiment: TP12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TP12
2,419,205	+				+0.0
2,419,257	+	hycH	NOLOHH_12450	0.21	-0.8
2,419,257	+	hycH	NOLOHH_12450	0.21	+0.4
2,419,258	-	hycH	NOLOHH_12450	0.21	+0.8
2,419,335	+	hycH	NOLOHH_12450	0.40	-0.8
2,419,335	+	hycH	NOLOHH_12450	0.40	+1.5
2,419,335	+	hycH	NOLOHH_12450	0.40	+1.5
2,419,336	-	hycH	NOLOHH_12450	0.40	+0.8
2,419,404	+	hycH	NOLOHH_12450	0.57	+0.8
2,419,404	+	hycH	NOLOHH_12450	0.57	+1.8
2,419,502	+	hycH	NOLOHH_12450	0.81	-1.4
2,419,503	-	hycH	NOLOHH_12450	0.81	-0.8
2,419,513	+	hycH	NOLOHH_12450	0.83	-1.2
2,419,513	+	hycH	NOLOHH_12450	0.83	+0.6
2,419,513	+	hycH	NOLOHH_12450	0.83	-0.7
2,419,513	+	hycH	NOLOHH_12450	0.83	-2.5
2,419,514	-	hycH	NOLOHH_12450	0.84	+0.5
2,419,514	-	hycH	NOLOHH_12450	0.84	+1.6
2,419,517	+	hycH	NOLOHH_12450	0.84	+1.8
2,419,518	-	hycH	NOLOHH_12450	0.85	-0.5
2,419,529	+	hycH	NOLOHH_12450	0.87	-0.8
2,419,530	-	hycH	NOLOHH_12450	0.88	+0.8
2,419,551	+				-0.8
2,419,552	-				+0.2
2,419,552	-				-0.8
2,419,552	-				+0.8
2,419,552	-				+1.2
2,419,552	-				+0.1
2,419,552	-				-0.1
2,419,587	-				+0.8
2,419,603	-				+0.6
2,419,603	-				+1.3
2,419,668	+	hycI	NOLOHH_12455	0.20	+2.4
2,419,828	-	hycI	NOLOHH_12455	0.54	+0.2
2,419,842	+	hycI	NOLOHH_12455	0.57	-0.9
2,419,858	+	hycI	NOLOHH_12455	0.61	-0.6
2,419,858	+	hycI	NOLOHH_12455	0.61	+1.1
2,419,859	-	hycI	NOLOHH_12455	0.61	-0.2
2,419,884	+	hycI	NOLOHH_12455	0.66	+0.8
2,419,933	+	hycI	NOLOHH_12455	0.76	+0.8
2,419,934	-	hycI	NOLOHH_12455	0.77	+0.8
2,419,978	+	hycI	NOLOHH_12455	0.86	-0.1
2,420,042	-				+0.5
2,420,161	+				-0.2
2,420,162	-				+0.4
2,420,162	-				-1.2
2,420,162	-				+0.2
2,420,200	-				-3.2
2,420,200	-				+1.0
2,420,204	-				-2.0
2,420,204	-				-0.8
2,420,204	-				+0.6
2,420,223	-				+0.0
2,420,232	+				+1.8
2,420,242	+				+0.8
2,420,243	-				+1.0
2,420,261	+				+0.8
2,420,304	+				-1.4
2,420,304	+				+0.8
2,420,305	-				+0.4
2,420,364	-	ascB	NOLOHH_12460	0.11	-0.8
2,420,380	+	ascB	NOLOHH_12460	0.12	+1.6
2,420,443	+	ascB	NOLOHH_12460	0.17	-0.4
2,420,444	-	ascB	NOLOHH_12460	0.17	-0.2
2,420,545	+	ascB	NOLOHH_12460	0.24	+2.0
2,420,553	-	ascB	NOLOHH_12460	0.25	-0.2
2,420,553	-	ascB	NOLOHH_12460	0.25	+0.2
2,420,553	-	ascB	NOLOHH_12460	0.25	-1.1
2,420,610	+	ascB	NOLOHH_12460	0.29	+1.5
2,420,611	-	ascB	NOLOHH_12460	0.29	+0.3
2,420,611	-	ascB	NOLOHH_12460	0.29	+0.3
2,420,621	+	ascB	NOLOHH_12460	0.29	-0.1
2,420,695	+	ascB	NOLOHH_12460	0.35	-0.6
2,420,699	-	ascB	NOLOHH_12460	0.35	-0.5
2,420,699	-	ascB	NOLOHH_12460	0.35	+0.4
2,420,699	-	ascB	NOLOHH_12460	0.35	+0.6
2,420,797	+	ascB	NOLOHH_12460	0.42	-0.2
2,420,797	+	ascB	NOLOHH_12460	0.42	+0.0
2,421,008	-	ascB	NOLOHH_12460	0.57	-1.3
2,421,077	+	ascB	NOLOHH_12460	0.61	-0.5
2,421,077	+	ascB	NOLOHH_12460	0.61	-0.9
2,421,078	-	ascB	NOLOHH_12460	0.61	+0.8
2,421,078	-	ascB	NOLOHH_12460	0.61	-1.0
2,421,078	-	ascB	NOLOHH_12460	0.61	+1.5
2,421,100	-	ascB	NOLOHH_12460	0.63	-0.2
2,421,107	-	ascB	NOLOHH_12460	0.64	+0.2
2,421,107	-	ascB	NOLOHH_12460	0.64	-1.5
2,421,263	+	ascB	NOLOHH_12460	0.74	+0.8
2,421,407	+	ascB	NOLOHH_12460	0.85	-1.0
2,421,408	-	ascB	NOLOHH_12460	0.85	-0.4
2,421,408	-	ascB	NOLOHH_12460	0.85	-0.2
2,421,525	-				-1.0
2,421,640	+				+0.0
2,421,640	+				-2.7
2,421,641	-				-1.7
2,421,641	-				-0.6
2,421,647	+				-1.5
2,421,647	+				-0.2
2,421,647	+				-0.2
2,421,647	+				-0.8
2,421,648	-				-0.6
2,421,648	-				-1.8
2,421,648	-				-0.7
2,421,737	+				-0.2
2,421,737	+				+0.8
2,421,737	+				-2.0
2,421,835	+	ascF	NOLOHH_12465	0.14	-0.1
2,421,902	-	ascF	NOLOHH_12465	0.18	-0.6
2,421,913	+	ascF	NOLOHH_12465	0.19	+0.4
2,421,957	+	ascF	NOLOHH_12465	0.22	+0.2
2,421,957	+	ascF	NOLOHH_12465	0.22	+2.1
2,421,957	+	ascF	NOLOHH_12465	0.22	-0.8
2,421,958	-	ascF	NOLOHH_12465	0.22	-0.8
2,421,959	+	ascF	NOLOHH_12465	0.22	+0.4
2,422,245	+	ascF	NOLOHH_12465	0.42	+0.0
2,422,280	-	ascF	NOLOHH_12465	0.44	+0.0
2,422,369	+	ascF	NOLOHH_12465	0.50	+1.2
2,422,369	+	ascF	NOLOHH_12465	0.50	-0.5
2,422,370	-	ascF	NOLOHH_12465	0.50	-1.2
2,422,393	+	ascF	NOLOHH_12465	0.52	-0.5
2,422,395	+	ascF	NOLOHH_12465	0.52	+0.8
2,422,395	+	ascF	NOLOHH_12465	0.52	+0.6
2,422,395	+	ascF	NOLOHH_12465	0.52	+0.8
2,422,395	+	ascF	NOLOHH_12465	0.52	+0.4
2,422,395	+	ascF	NOLOHH_12465	0.52	-0.5
2,422,395	+	ascF	NOLOHH_12465	0.52	+1.8
2,422,396	-	ascF	NOLOHH_12465	0.52	-0.2
2,422,396	-	ascF	NOLOHH_12465	0.52	-0.2
2,422,437	+	ascF	NOLOHH_12465	0.55	+1.0
2,422,438	-	ascF	NOLOHH_12465	0.55	+0.4
2,422,441	+	ascF	NOLOHH_12465	0.55	+0.2
2,422,442	-	ascF	NOLOHH_12465	0.55	+1.8
2,422,442	-	ascF	NOLOHH_12465	0.55	+0.5
2,422,442	-	ascF	NOLOHH_12465	0.55	-0.8
2,422,443	+	ascF	NOLOHH_12465	0.55	-0.4
2,422,443	+	ascF	NOLOHH_12465	0.55	-0.4
2,422,444	-	ascF	NOLOHH_12465	0.55	+0.2
2,422,444	-	ascF	NOLOHH_12465	0.55	+2.2
2,422,444	-	ascF	NOLOHH_12465	0.55	+0.2
2,422,529	+	ascF	NOLOHH_12465	0.61	+0.3
2,422,565	-	ascF	NOLOHH_12465	0.64	+0.6
2,422,565	-	ascF	NOLOHH_12465	0.64	+0.1