Strain Fitness in Escherichia coli ECOR27 around NOLOHH_12085

Experiment: TP12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TP12
2,342,083	-	syd	NOLOHH_12075	0.40	+1.0
2,342,105	+	syd	NOLOHH_12075	0.44	+0.5
2,342,106	-	syd	NOLOHH_12075	0.44	-0.5
2,342,106	-	syd	NOLOHH_12075	0.44	+0.4
2,342,108	-	syd	NOLOHH_12075	0.45	+0.3
2,342,259	+	syd	NOLOHH_12075	0.72	+0.3
2,342,260	-	syd	NOLOHH_12075	0.72	-1.0
2,342,260	-	syd	NOLOHH_12075	0.72	-0.8
2,342,263	+	syd	NOLOHH_12075	0.73	-1.7
2,342,264	-	syd	NOLOHH_12075	0.73	+2.8
2,342,264	-	syd	NOLOHH_12075	0.73	-3.0
2,342,286	+	syd	NOLOHH_12075	0.77	-1.5
2,342,287	-	syd	NOLOHH_12075	0.77	-1.0
2,342,347	+	syd	NOLOHH_12075	0.88	-0.2
2,342,347	+	syd	NOLOHH_12075	0.88	-0.2
2,342,348	-	syd	NOLOHH_12075	0.88	+0.8
2,342,362	-				-0.6
2,342,396	-				-2.7
2,342,417	+				-1.4
2,342,418	-				-0.8
2,342,589	+				+1.4
2,342,615	-				+0.7
2,342,615	-				+0.4
2,342,826	+				+0.1
2,342,826	+				-0.5
2,342,858	+				+0.3
2,342,968	+				+0.8
2,342,968	+				+0.2
2,342,987	-				-0.8
2,343,031	+				+2.8
2,343,133	+	yqcC	NOLOHH_12085	0.31	-0.7
2,343,134	-	yqcC	NOLOHH_12085	0.31	+0.1
2,343,134	-	yqcC	NOLOHH_12085	0.31	+0.1
2,343,139	+	yqcC	NOLOHH_12085	0.32	-2.0
2,343,139	+	yqcC	NOLOHH_12085	0.32	+1.8
2,343,219	+	yqcC	NOLOHH_12085	0.57	+0.8
2,343,219	+	yqcC	NOLOHH_12085	0.57	+0.1
2,343,219	+	yqcC	NOLOHH_12085	0.57	+0.8
2,343,263	+	yqcC	NOLOHH_12085	0.70	+1.0
2,343,264	-	yqcC	NOLOHH_12085	0.70	+0.4
2,343,359	+				-0.2
2,343,359	+				-0.8
2,343,359	+				+0.5
2,343,359	+				-0.2
2,343,359	+				-0.5
2,343,371	+				-0.8
2,343,371	+				-0.6
2,343,371	+				+0.4
2,343,371	+				+0.6
2,343,372	-				+1.8
2,343,372	-				-1.5
2,343,372	-				-1.4
2,343,372	-				-0.8
2,343,372	-				+0.4
2,343,372	-				-0.8
2,343,372	-				-1.3
2,343,402	-				-0.4
2,343,406	-				+0.1
2,343,458	+	truC	NOLOHH_12090	0.12	-0.2
2,343,458	+	truC	NOLOHH_12090	0.12	+0.3
2,343,665	-	truC	NOLOHH_12090	0.39	-1.7
2,343,699	+	truC	NOLOHH_12090	0.43	-0.1
2,343,717	+	truC	NOLOHH_12090	0.45	+1.0
2,343,718	-	truC	NOLOHH_12090	0.46	-0.8
2,343,765	-	truC	NOLOHH_12090	0.52	+1.1
2,343,885	+	truC	NOLOHH_12090	0.67	-0.4
2,343,911	+	truC	NOLOHH_12090	0.70	-2.0
2,343,962	+	truC	NOLOHH_12090	0.77	-1.1
2,343,962	+	truC	NOLOHH_12090	0.77	-0.4
2,343,962	+	truC	NOLOHH_12090	0.77	-1.0
2,343,962	+	truC	NOLOHH_12090	0.77	-1.0
2,343,962	+	truC	NOLOHH_12090	0.77	-1.2
2,343,962	+	truC	NOLOHH_12090	0.77	+2.5
2,343,962	+	truC	NOLOHH_12090	0.77	-0.3
2,343,963	-	truC	NOLOHH_12090	0.77	+0.8
2,343,963	-	truC	NOLOHH_12090	0.77	-0.2
2,343,963	-	truC	NOLOHH_12090	0.77	+1.4
2,343,963	-	truC	NOLOHH_12090	0.77	+0.4
2,343,963	-	truC	NOLOHH_12090	0.77	-0.0
2,343,963	-	truC	NOLOHH_12090	0.77	-0.8
2,343,963	-	truC	NOLOHH_12090	0.77	-0.5
2,343,963	-	truC	NOLOHH_12090	0.77	-0.0
2,343,997	-	truC	NOLOHH_12090	0.81	-0.2
2,344,133	+				+0.1
2,344,133	+				-0.4
2,344,133	+				-0.8
2,344,133	+				+0.2
2,344,133	+				-0.5
2,344,133	+				+1.5
2,344,134	-				+1.7
2,344,134	-				-0.8
2,344,175	+				-0.4
2,344,307	+	yqcA	NOLOHH_12095	0.32	-1.5
2,344,307	+	yqcA	NOLOHH_12095	0.32	+1.6
2,344,307	+	yqcA	NOLOHH_12095	0.32	+0.8
2,344,308	-	yqcA	NOLOHH_12095	0.33	+2.8
2,344,311	+	yqcA	NOLOHH_12095	0.33	-2.0
2,344,311	+	yqcA	NOLOHH_12095	0.33	+0.8
2,344,311	+	yqcA	NOLOHH_12095	0.33	+0.1
2,344,311	+	yqcA	NOLOHH_12095	0.33	+0.4
2,344,311	+	yqcA	NOLOHH_12095	0.33	+0.5
2,344,311	+	yqcA	NOLOHH_12095	0.33	+0.5
2,344,311	+	yqcA	NOLOHH_12095	0.33	+0.7
2,344,311	+	yqcA	NOLOHH_12095	0.33	+0.1
2,344,311	+	yqcA	NOLOHH_12095	0.33	-0.0
2,344,311	+	yqcA	NOLOHH_12095	0.33	+0.8
2,344,311	+	yqcA	NOLOHH_12095	0.33	+0.8
2,344,312	-	yqcA	NOLOHH_12095	0.34	+0.5
2,344,312	-	yqcA	NOLOHH_12095	0.34	-0.2
2,344,312	-	yqcA	NOLOHH_12095	0.34	+0.4
2,344,312	-	yqcA	NOLOHH_12095	0.34	+0.8
2,344,312	-	yqcA	NOLOHH_12095	0.34	-0.2
2,344,312	-	yqcA	NOLOHH_12095	0.34	-0.4
2,344,325	+	yqcA	NOLOHH_12095	0.36	-1.1
2,344,326	-	yqcA	NOLOHH_12095	0.37	+0.2