Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_01757

Experiment: lib only

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_01756 and OHPLBJKB_01757 are separated by 235 nucleotidesOHPLBJKB_01757 and OHPLBJKB_01758 are separated by 0 nucleotides OHPLBJKB_01756: OHPLBJKB_01756 - Metal-binding protein ZinT, at 1,849,501 to 1,850,172 _01756 OHPLBJKB_01757: OHPLBJKB_01757 - Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ, at 1,850,408 to 1,851,043 _01757 OHPLBJKB_01758: OHPLBJKB_01758 - Protein-methionine-sulfoxide reductase catalytic subunit MsrP, at 1,851,044 to 1,852,048 _01758 Position (kb) 1850 1851 1852Strain fitness (log2 ratio) -2 -1 0 1 2at 1849.414 kb on - strandat 1849.414 kb on - strandat 1849.455 kb on + strandat 1849.469 kb on - strandat 1849.556 kb on + strandat 1849.556 kb on + strandat 1849.557 kb on - strandat 1849.840 kb on - strand, within OHPLBJKB_01756at 1849.865 kb on + strand, within OHPLBJKB_01756at 1850.054 kb on - strand, within OHPLBJKB_01756at 1850.106 kb on + strandat 1850.116 kb on + strandat 1850.117 kb on - strandat 1850.117 kb on - strandat 1850.175 kb on + strandat 1850.175 kb on + strandat 1850.176 kb on - strandat 1850.176 kb on - strandat 1850.176 kb on - strandat 1850.176 kb on - strandat 1850.177 kb on + strandat 1850.186 kb on + strandat 1850.187 kb on - strandat 1850.187 kb on - strandat 1850.323 kb on + strandat 1850.387 kb on + strandat 1850.388 kb on - strandat 1850.402 kb on - strandat 1850.409 kb on + strandat 1850.409 kb on + strandat 1850.411 kb on + strandat 1850.411 kb on + strandat 1850.411 kb on + strandat 1850.411 kb on + strandat 1850.411 kb on + strandat 1850.412 kb on - strandat 1850.412 kb on - strandat 1850.412 kb on - strandat 1850.508 kb on + strand, within OHPLBJKB_01757at 1850.508 kb on + strand, within OHPLBJKB_01757at 1850.509 kb on - strand, within OHPLBJKB_01757at 1850.509 kb on - strand, within OHPLBJKB_01757at 1850.551 kb on - strand, within OHPLBJKB_01757at 1850.555 kb on + strand, within OHPLBJKB_01757at 1850.590 kb on + strand, within OHPLBJKB_01757at 1850.652 kb on - strand, within OHPLBJKB_01757at 1850.690 kb on + strand, within OHPLBJKB_01757at 1850.690 kb on + strand, within OHPLBJKB_01757at 1850.694 kb on + strand, within OHPLBJKB_01757at 1850.708 kb on + strand, within OHPLBJKB_01757at 1850.709 kb on - strand, within OHPLBJKB_01757at 1850.721 kb on - strand, within OHPLBJKB_01757at 1850.734 kb on + strand, within OHPLBJKB_01757at 1850.761 kb on - strand, within OHPLBJKB_01757at 1850.798 kb on + strand, within OHPLBJKB_01757at 1850.799 kb on - strand, within OHPLBJKB_01757at 1850.799 kb on - strand, within OHPLBJKB_01757at 1850.823 kb on - strand, within OHPLBJKB_01757at 1850.917 kb on + strand, within OHPLBJKB_01757at 1851.205 kb on + strand, within OHPLBJKB_01758at 1851.280 kb on + strand, within OHPLBJKB_01758at 1851.280 kb on + strand, within OHPLBJKB_01758at 1851.283 kb on + strand, within OHPLBJKB_01758at 1851.283 kb on + strand, within OHPLBJKB_01758at 1851.284 kb on - strand, within OHPLBJKB_01758at 1851.284 kb on - strand, within OHPLBJKB_01758at 1851.286 kb on + strand, within OHPLBJKB_01758at 1851.286 kb on + strand, within OHPLBJKB_01758at 1851.287 kb on - strand, within OHPLBJKB_01758at 1851.287 kb on - strand, within OHPLBJKB_01758at 1851.287 kb on - strand, within OHPLBJKB_01758at 1851.287 kb on - strand, within OHPLBJKB_01758at 1851.287 kb on - strand, within OHPLBJKB_01758at 1851.287 kb on - strand, within OHPLBJKB_01758at 1851.438 kb on + strand, within OHPLBJKB_01758at 1851.438 kb on + strand, within OHPLBJKB_01758at 1851.438 kb on + strand, within OHPLBJKB_01758at 1851.438 kb on + strand, within OHPLBJKB_01758at 1851.439 kb on - strand, within OHPLBJKB_01758at 1851.439 kb on - strand, within OHPLBJKB_01758at 1851.444 kb on + strand, within OHPLBJKB_01758at 1851.445 kb on - strand, within OHPLBJKB_01758at 1851.501 kb on + strand, within OHPLBJKB_01758at 1851.523 kb on - strand, within OHPLBJKB_01758at 1851.523 kb on - strand, within OHPLBJKB_01758at 1851.619 kb on + strand, within OHPLBJKB_01758at 1851.628 kb on + strand, within OHPLBJKB_01758at 1851.629 kb on - strand, within OHPLBJKB_01758at 1851.629 kb on - strand, within OHPLBJKB_01758at 1851.787 kb on + strand, within OHPLBJKB_01758at 1851.802 kb on + strand, within OHPLBJKB_01758at 1851.802 kb on + strand, within OHPLBJKB_01758at 1851.907 kb on + strand, within OHPLBJKB_01758at 1851.908 kb on - strand, within OHPLBJKB_01758at 1851.908 kb on - strand, within OHPLBJKB_01758at 1851.992 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction lib only
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1,849,414 - +0.3
1,849,414 - +0.6
1,849,455 + -1.6
1,849,469 - -0.6
1,849,556 + +0.1
1,849,556 + -0.9
1,849,557 - +1.0
1,849,840 - OHPLBJKB_01756 0.50 -0.4
1,849,865 + OHPLBJKB_01756 0.54 -1.9
1,850,054 - OHPLBJKB_01756 0.82 -0.4
1,850,106 + -0.1
1,850,116 + -0.1
1,850,117 - +0.8
1,850,117 - -0.5
1,850,175 + +1.9
1,850,175 + +0.5
1,850,176 - -0.5
1,850,176 - +0.9
1,850,176 - -0.0
1,850,176 - -0.9
1,850,177 + -0.2
1,850,186 + -0.9
1,850,187 - +0.4
1,850,187 - -0.0
1,850,323 + -0.2
1,850,387 + +0.5
1,850,388 - +0.6
1,850,402 - +1.0
1,850,409 + +0.3
1,850,409 + +1.4
1,850,411 + +0.1
1,850,411 + -1.9
1,850,411 + -0.7
1,850,411 + +1.2
1,850,411 + +0.6
1,850,412 - -0.9
1,850,412 - +0.7
1,850,412 - +0.1
1,850,508 + OHPLBJKB_01757 0.16 +0.5
1,850,508 + OHPLBJKB_01757 0.16 +0.3
1,850,509 - OHPLBJKB_01757 0.16 -0.1
1,850,509 - OHPLBJKB_01757 0.16 -0.2
1,850,551 - OHPLBJKB_01757 0.22 -0.0
1,850,555 + OHPLBJKB_01757 0.23 +0.4
1,850,590 + OHPLBJKB_01757 0.29 -1.1
1,850,652 - OHPLBJKB_01757 0.38 +0.6
1,850,690 + OHPLBJKB_01757 0.44 -0.7
1,850,690 + OHPLBJKB_01757 0.44 +0.3
1,850,694 + OHPLBJKB_01757 0.45 -0.5
1,850,708 + OHPLBJKB_01757 0.47 -0.4
1,850,709 - OHPLBJKB_01757 0.47 -0.0
1,850,721 - OHPLBJKB_01757 0.49 -0.5
1,850,734 + OHPLBJKB_01757 0.51 +1.1
1,850,761 - OHPLBJKB_01757 0.56 +0.3
1,850,798 + OHPLBJKB_01757 0.61 -0.3
1,850,799 - OHPLBJKB_01757 0.61 +0.6
1,850,799 - OHPLBJKB_01757 0.61 -0.6
1,850,823 - OHPLBJKB_01757 0.65 -0.9
1,850,917 + OHPLBJKB_01757 0.80 +0.1
1,851,205 + OHPLBJKB_01758 0.16 -1.0
1,851,280 + OHPLBJKB_01758 0.23 +1.4
1,851,280 + OHPLBJKB_01758 0.23 +0.1
1,851,283 + OHPLBJKB_01758 0.24 -1.2
1,851,283 + OHPLBJKB_01758 0.24 -0.9
1,851,284 - OHPLBJKB_01758 0.24 +0.6
1,851,284 - OHPLBJKB_01758 0.24 -0.5
1,851,286 + OHPLBJKB_01758 0.24 -0.2
1,851,286 + OHPLBJKB_01758 0.24 +0.1
1,851,287 - OHPLBJKB_01758 0.24 +0.2
1,851,287 - OHPLBJKB_01758 0.24 -0.8
1,851,287 - OHPLBJKB_01758 0.24 -1.2
1,851,287 - OHPLBJKB_01758 0.24 +0.7
1,851,287 - OHPLBJKB_01758 0.24 -1.1
1,851,287 - OHPLBJKB_01758 0.24 +1.1
1,851,438 + OHPLBJKB_01758 0.39 -1.3
1,851,438 + OHPLBJKB_01758 0.39 +0.4
1,851,438 + OHPLBJKB_01758 0.39 -1.9
1,851,438 + OHPLBJKB_01758 0.39 +0.4
1,851,439 - OHPLBJKB_01758 0.39 +0.3
1,851,439 - OHPLBJKB_01758 0.39 +0.5
1,851,444 + OHPLBJKB_01758 0.40 -0.1
1,851,445 - OHPLBJKB_01758 0.40 +0.1
1,851,501 + OHPLBJKB_01758 0.45 +0.5
1,851,523 - OHPLBJKB_01758 0.48 -0.8
1,851,523 - OHPLBJKB_01758 0.48 +1.3
1,851,619 + OHPLBJKB_01758 0.57 +1.0
1,851,628 + OHPLBJKB_01758 0.58 +1.1
1,851,629 - OHPLBJKB_01758 0.58 +0.1
1,851,629 - OHPLBJKB_01758 0.58 -1.4
1,851,787 + OHPLBJKB_01758 0.74 -0.1
1,851,802 + OHPLBJKB_01758 0.75 +0.8
1,851,802 + OHPLBJKB_01758 0.75 +0.2
1,851,907 + OHPLBJKB_01758 0.86 -0.6
1,851,908 - OHPLBJKB_01758 0.86 +0.7
1,851,908 - OHPLBJKB_01758 0.86 +1.1
1,851,992 - +0.7

Or see this region's nucleotide sequence