Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_00755

Experiment: lib only

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_00753 and OHPLBJKB_00754 are separated by 64 nucleotidesOHPLBJKB_00754 and OHPLBJKB_00755 are separated by 27 nucleotidesOHPLBJKB_00755 and OHPLBJKB_00756 are separated by 160 nucleotidesOHPLBJKB_00756 and OHPLBJKB_00757 overlap by 1 nucleotides OHPLBJKB_00753: OHPLBJKB_00753 - Membrane-bound lytic murein transglycosylase C, at 776,471 to 777,550 _00753 OHPLBJKB_00754: OHPLBJKB_00754 - putative Fe(2+)-trafficking protein, at 777,615 to 777,890 _00754 OHPLBJKB_00755: OHPLBJKB_00755 - Adenine DNA glycosylase, at 777,918 to 778,970 _00755 OHPLBJKB_00756: OHPLBJKB_00756 - tRNA (guanine-N(7)-)-methyltransferase, at 779,131 to 779,850 _00756 OHPLBJKB_00757: OHPLBJKB_00757 - hypothetical protein, at 779,850 to 780,176 _00757 Position (kb) 777 778 779Strain fitness (log2 ratio) -2 -1 0 1at 776.944 kb on - strand, within OHPLBJKB_00753at 776.944 kb on - strand, within OHPLBJKB_00753at 776.976 kb on + strand, within OHPLBJKB_00753at 776.976 kb on + strand, within OHPLBJKB_00753at 777.016 kb on + strand, within OHPLBJKB_00753at 777.030 kb on + strand, within OHPLBJKB_00753at 777.030 kb on + strand, within OHPLBJKB_00753at 777.030 kb on + strand, within OHPLBJKB_00753at 777.038 kb on - strand, within OHPLBJKB_00753at 777.081 kb on + strand, within OHPLBJKB_00753at 777.081 kb on + strand, within OHPLBJKB_00753at 777.176 kb on - strand, within OHPLBJKB_00753at 777.178 kb on + strand, within OHPLBJKB_00753at 777.195 kb on + strand, within OHPLBJKB_00753at 777.196 kb on - strand, within OHPLBJKB_00753at 777.241 kb on + strand, within OHPLBJKB_00753at 777.295 kb on + strand, within OHPLBJKB_00753at 777.295 kb on + strand, within OHPLBJKB_00753at 777.296 kb on - strand, within OHPLBJKB_00753at 777.296 kb on - strand, within OHPLBJKB_00753at 777.349 kb on - strand, within OHPLBJKB_00753at 777.349 kb on - strand, within OHPLBJKB_00753at 777.349 kb on - strand, within OHPLBJKB_00753at 777.358 kb on - strand, within OHPLBJKB_00753at 777.364 kb on + strand, within OHPLBJKB_00753at 777.409 kb on + strand, within OHPLBJKB_00753at 777.410 kb on - strand, within OHPLBJKB_00753at 777.410 kb on - strand, within OHPLBJKB_00753at 777.410 kb on - strand, within OHPLBJKB_00753at 777.451 kb on + strandat 777.451 kb on + strandat 777.474 kb on + strandat 777.474 kb on + strandat 777.474 kb on + strandat 777.474 kb on + strandat 777.474 kb on + strandat 777.474 kb on + strandat 777.474 kb on + strandat 777.474 kb on + strandat 777.475 kb on - strandat 777.475 kb on - strandat 777.475 kb on - strandat 777.475 kb on - strandat 777.475 kb on - strandat 777.475 kb on - strandat 777.475 kb on - strandat 777.475 kb on - strandat 777.475 kb on - strandat 777.475 kb on - strandat 777.623 kb on + strandat 777.635 kb on + strandat 777.636 kb on - strandat 777.637 kb on + strandat 777.660 kb on - strand, within OHPLBJKB_00754at 777.660 kb on - strand, within OHPLBJKB_00754at 777.799 kb on + strand, within OHPLBJKB_00754at 777.799 kb on + strand, within OHPLBJKB_00754at 777.799 kb on + strand, within OHPLBJKB_00754at 777.799 kb on + strand, within OHPLBJKB_00754at 777.799 kb on + strand, within OHPLBJKB_00754at 777.799 kb on + strand, within OHPLBJKB_00754at 777.799 kb on + strand, within OHPLBJKB_00754at 777.799 kb on + strand, within OHPLBJKB_00754at 777.799 kb on + strand, within OHPLBJKB_00754at 777.800 kb on - strand, within OHPLBJKB_00754at 777.800 kb on - strand, within OHPLBJKB_00754at 777.939 kb on + strandat 777.939 kb on + strandat 777.949 kb on - strandat 778.001 kb on + strandat 778.001 kb on + strandat 778.002 kb on - strandat 778.002 kb on - strandat 778.002 kb on - strandat 778.061 kb on + strand, within OHPLBJKB_00755at 778.062 kb on - strand, within OHPLBJKB_00755at 778.070 kb on + strand, within OHPLBJKB_00755at 778.071 kb on - strand, within OHPLBJKB_00755at 778.071 kb on - strand, within OHPLBJKB_00755at 778.094 kb on + strand, within OHPLBJKB_00755at 778.094 kb on + strand, within OHPLBJKB_00755at 778.094 kb on + strand, within OHPLBJKB_00755at 778.094 kb on + strand, within OHPLBJKB_00755at 778.198 kb on - strand, within OHPLBJKB_00755at 778.198 kb on - strand, within OHPLBJKB_00755at 778.239 kb on + strand, within OHPLBJKB_00755at 778.239 kb on + strand, within OHPLBJKB_00755at 778.239 kb on + strand, within OHPLBJKB_00755at 778.239 kb on + strand, within OHPLBJKB_00755at 778.239 kb on + strand, within OHPLBJKB_00755at 778.239 kb on + strand, within OHPLBJKB_00755at 778.239 kb on + strand, within OHPLBJKB_00755at 778.239 kb on + strand, within OHPLBJKB_00755at 778.240 kb on - strand, within OHPLBJKB_00755at 778.240 kb on - strand, within OHPLBJKB_00755at 778.257 kb on + strand, within OHPLBJKB_00755at 778.257 kb on + strand, within OHPLBJKB_00755at 778.258 kb on - strand, within OHPLBJKB_00755at 778.258 kb on - strand, within OHPLBJKB_00755at 778.258 kb on - strand, within OHPLBJKB_00755at 778.261 kb on - strand, within OHPLBJKB_00755at 778.328 kb on + strand, within OHPLBJKB_00755at 778.329 kb on - strand, within OHPLBJKB_00755at 778.329 kb on - strand, within OHPLBJKB_00755at 778.329 kb on - strand, within OHPLBJKB_00755at 778.346 kb on + strand, within OHPLBJKB_00755at 778.346 kb on + strand, within OHPLBJKB_00755at 778.346 kb on + strand, within OHPLBJKB_00755at 778.347 kb on - strand, within OHPLBJKB_00755at 778.347 kb on - strand, within OHPLBJKB_00755at 778.347 kb on - strand, within OHPLBJKB_00755at 778.431 kb on - strand, within OHPLBJKB_00755at 778.479 kb on + strand, within OHPLBJKB_00755at 778.479 kb on + strand, within OHPLBJKB_00755at 778.485 kb on - strand, within OHPLBJKB_00755at 778.519 kb on - strand, within OHPLBJKB_00755at 778.525 kb on + strand, within OHPLBJKB_00755at 778.526 kb on - strand, within OHPLBJKB_00755at 778.674 kb on + strand, within OHPLBJKB_00755at 778.675 kb on - strand, within OHPLBJKB_00755at 778.723 kb on + strand, within OHPLBJKB_00755at 778.726 kb on + strand, within OHPLBJKB_00755at 778.726 kb on + strand, within OHPLBJKB_00755at 778.727 kb on - strand, within OHPLBJKB_00755at 778.872 kb on + strandat 778.872 kb on + strandat 778.872 kb on + strandat 778.872 kb on + strandat 778.872 kb on + strandat 778.872 kb on + strandat 778.872 kb on + strandat 778.872 kb on + strandat 778.873 kb on - strandat 778.921 kb on + strandat 778.921 kb on + strandat 778.922 kb on - strandat 778.925 kb on + strandat 778.926 kb on - strandat 778.926 kb on - strandat 779.057 kb on - strandat 779.057 kb on - strandat 779.078 kb on + strandat 779.079 kb on - strandat 779.079 kb on - strandat 779.079 kb on - strandat 779.187 kb on + strandat 779.194 kb on - strandat 779.251 kb on + strand, within OHPLBJKB_00756at 779.251 kb on + strand, within OHPLBJKB_00756at 779.251 kb on + strand, within OHPLBJKB_00756at 779.286 kb on + strand, within OHPLBJKB_00756at 779.286 kb on + strand, within OHPLBJKB_00756at 779.286 kb on + strand, within OHPLBJKB_00756at 779.287 kb on - strand, within OHPLBJKB_00756at 779.287 kb on - strand, within OHPLBJKB_00756at 779.465 kb on + strand, within OHPLBJKB_00756at 779.465 kb on + strand, within OHPLBJKB_00756at 779.466 kb on - strand, within OHPLBJKB_00756at 779.512 kb on - strand, within OHPLBJKB_00756at 779.584 kb on - strand, within OHPLBJKB_00756at 779.587 kb on - strand, within OHPLBJKB_00756at 779.596 kb on - strand, within OHPLBJKB_00756at 779.601 kb on - strand, within OHPLBJKB_00756at 779.625 kb on - strand, within OHPLBJKB_00756at 779.625 kb on - strand, within OHPLBJKB_00756at 779.658 kb on + strand, within OHPLBJKB_00756at 779.691 kb on + strand, within OHPLBJKB_00756at 779.691 kb on + strand, within OHPLBJKB_00756at 779.691 kb on + strand, within OHPLBJKB_00756at 779.691 kb on + strand, within OHPLBJKB_00756at 779.691 kb on + strand, within OHPLBJKB_00756at 779.691 kb on + strand, within OHPLBJKB_00756at 779.692 kb on - strand, within OHPLBJKB_00756at 779.692 kb on - strand, within OHPLBJKB_00756at 779.692 kb on - strand, within OHPLBJKB_00756at 779.692 kb on - strand, within OHPLBJKB_00756at 779.692 kb on - strand, within OHPLBJKB_00756at 779.692 kb on - strand, within OHPLBJKB_00756at 779.692 kb on - strand, within OHPLBJKB_00756at 779.692 kb on - strand, within OHPLBJKB_00756at 779.692 kb on - strand, within OHPLBJKB_00756at 779.713 kb on - strand, within OHPLBJKB_00756at 779.713 kb on - strand, within OHPLBJKB_00756at 779.713 kb on - strand, within OHPLBJKB_00756at 779.724 kb on + strand, within OHPLBJKB_00756at 779.724 kb on + strand, within OHPLBJKB_00756at 779.725 kb on - strand, within OHPLBJKB_00756at 779.725 kb on - strand, within OHPLBJKB_00756at 779.725 kb on - strand, within OHPLBJKB_00756at 779.750 kb on - strand, within OHPLBJKB_00756at 779.750 kb on - strand, within OHPLBJKB_00756at 779.750 kb on - strand, within OHPLBJKB_00756at 779.828 kb on + strandat 779.828 kb on + strandat 779.828 kb on + strandat 779.828 kb on + strandat 779.828 kb on + strandat 779.829 kb on - strandat 779.829 kb on - strandat 779.848 kb on + strandat 779.849 kb on - strandat 779.849 kb on - strandat 779.864 kb on + strandat 779.945 kb on + strand, within OHPLBJKB_00757at 779.945 kb on + strand, within OHPLBJKB_00757at 779.945 kb on + strand, within OHPLBJKB_00757at 779.946 kb on - strand, within OHPLBJKB_00757at 779.946 kb on - strand, within OHPLBJKB_00757at 779.966 kb on + strand, within OHPLBJKB_00757at 779.966 kb on + strand, within OHPLBJKB_00757

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Per-strain Table

Position Strand Gene LocusTag Fraction lib only
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776,944 - OHPLBJKB_00753 0.44 -0.1
776,944 - OHPLBJKB_00753 0.44 -0.6
776,976 + OHPLBJKB_00753 0.47 +0.1
776,976 + OHPLBJKB_00753 0.47 +0.2
777,016 + OHPLBJKB_00753 0.50 -1.6
777,030 + OHPLBJKB_00753 0.52 -0.2
777,030 + OHPLBJKB_00753 0.52 -1.1
777,030 + OHPLBJKB_00753 0.52 -0.5
777,038 - OHPLBJKB_00753 0.53 -0.3
777,081 + OHPLBJKB_00753 0.56 +0.8
777,081 + OHPLBJKB_00753 0.56 +1.3
777,176 - OHPLBJKB_00753 0.65 -1.0
777,178 + OHPLBJKB_00753 0.65 -0.5
777,195 + OHPLBJKB_00753 0.67 -0.4
777,196 - OHPLBJKB_00753 0.67 -0.2
777,241 + OHPLBJKB_00753 0.71 -0.0
777,295 + OHPLBJKB_00753 0.76 +0.3
777,295 + OHPLBJKB_00753 0.76 +1.0
777,296 - OHPLBJKB_00753 0.76 +1.1
777,296 - OHPLBJKB_00753 0.76 -1.2
777,349 - OHPLBJKB_00753 0.81 +0.7
777,349 - OHPLBJKB_00753 0.81 +0.2
777,349 - OHPLBJKB_00753 0.81 -1.0
777,358 - OHPLBJKB_00753 0.82 -0.1
777,364 + OHPLBJKB_00753 0.83 -1.2
777,409 + OHPLBJKB_00753 0.87 -1.1
777,410 - OHPLBJKB_00753 0.87 +0.6
777,410 - OHPLBJKB_00753 0.87 -1.2
777,410 - OHPLBJKB_00753 0.87 -1.3
777,451 + -0.7
777,451 + +0.4
777,474 + -0.8
777,474 + +1.0
777,474 + +0.2
777,474 + +0.4
777,474 + +0.7
777,474 + -0.4
777,474 + -0.1
777,474 + -0.4
777,475 - +0.5
777,475 - -0.3
777,475 - -0.7
777,475 - -0.7
777,475 - +0.0
777,475 - -1.4
777,475 - +0.2
777,475 - +0.1
777,475 - -1.2
777,475 - -0.2
777,623 + +1.1
777,635 + +0.1
777,636 - -0.1
777,637 + +0.4
777,660 - OHPLBJKB_00754 0.16 -0.9
777,660 - OHPLBJKB_00754 0.16 +0.3
777,799 + OHPLBJKB_00754 0.67 -0.2
777,799 + OHPLBJKB_00754 0.67 -0.1
777,799 + OHPLBJKB_00754 0.67 +0.0
777,799 + OHPLBJKB_00754 0.67 -0.7
777,799 + OHPLBJKB_00754 0.67 -0.8
777,799 + OHPLBJKB_00754 0.67 -0.9
777,799 + OHPLBJKB_00754 0.67 -1.1
777,799 + OHPLBJKB_00754 0.67 +0.2
777,799 + OHPLBJKB_00754 0.67 -1.0
777,800 - OHPLBJKB_00754 0.67 +0.3
777,800 - OHPLBJKB_00754 0.67 -0.2
777,939 + +0.4
777,939 + -0.3
777,949 - -0.8
778,001 + -0.4
778,001 + -0.7
778,002 - +1.4
778,002 - -1.2
778,002 - -0.0
778,061 + OHPLBJKB_00755 0.14 +0.4
778,062 - OHPLBJKB_00755 0.14 +0.6
778,070 + OHPLBJKB_00755 0.14 -0.6
778,071 - OHPLBJKB_00755 0.15 +0.7
778,071 - OHPLBJKB_00755 0.15 +0.0
778,094 + OHPLBJKB_00755 0.17 -1.6
778,094 + OHPLBJKB_00755 0.17 -0.8
778,094 + OHPLBJKB_00755 0.17 -1.0
778,094 + OHPLBJKB_00755 0.17 -0.5
778,198 - OHPLBJKB_00755 0.27 +0.9
778,198 - OHPLBJKB_00755 0.27 -0.1
778,239 + OHPLBJKB_00755 0.30 +1.1
778,239 + OHPLBJKB_00755 0.30 -0.3
778,239 + OHPLBJKB_00755 0.30 -0.4
778,239 + OHPLBJKB_00755 0.30 -0.5
778,239 + OHPLBJKB_00755 0.30 -0.2
778,239 + OHPLBJKB_00755 0.30 +0.4
778,239 + OHPLBJKB_00755 0.30 -0.3
778,239 + OHPLBJKB_00755 0.30 +0.7
778,240 - OHPLBJKB_00755 0.31 +0.6
778,240 - OHPLBJKB_00755 0.31 +0.7
778,257 + OHPLBJKB_00755 0.32 +0.8
778,257 + OHPLBJKB_00755 0.32 +0.4
778,258 - OHPLBJKB_00755 0.32 +0.1
778,258 - OHPLBJKB_00755 0.32 +0.3
778,258 - OHPLBJKB_00755 0.32 -0.1
778,261 - OHPLBJKB_00755 0.33 -0.0
778,328 + OHPLBJKB_00755 0.39 -0.2
778,329 - OHPLBJKB_00755 0.39 +1.0
778,329 - OHPLBJKB_00755 0.39 +0.2
778,329 - OHPLBJKB_00755 0.39 +0.5
778,346 + OHPLBJKB_00755 0.41 +0.3
778,346 + OHPLBJKB_00755 0.41 -0.9
778,346 + OHPLBJKB_00755 0.41 -0.4
778,347 - OHPLBJKB_00755 0.41 -0.5
778,347 - OHPLBJKB_00755 0.41 +0.7
778,347 - OHPLBJKB_00755 0.41 -0.3
778,431 - OHPLBJKB_00755 0.49 -0.3
778,479 + OHPLBJKB_00755 0.53 +0.1
778,479 + OHPLBJKB_00755 0.53 -0.9
778,485 - OHPLBJKB_00755 0.54 -0.5
778,519 - OHPLBJKB_00755 0.57 -0.0
778,525 + OHPLBJKB_00755 0.58 +0.1
778,526 - OHPLBJKB_00755 0.58 +0.4
778,674 + OHPLBJKB_00755 0.72 +0.2
778,675 - OHPLBJKB_00755 0.72 +0.1
778,723 + OHPLBJKB_00755 0.76 +1.1
778,726 + OHPLBJKB_00755 0.77 +0.4
778,726 + OHPLBJKB_00755 0.77 +0.2
778,727 - OHPLBJKB_00755 0.77 +0.9
778,872 + -1.1
778,872 + +0.5
778,872 + -1.8
778,872 + -1.0
778,872 + -1.3
778,872 + -0.2
778,872 + +0.3
778,872 + -0.9
778,873 - +0.4
778,921 + -0.2
778,921 + +1.1
778,922 - +0.3
778,925 + +0.3
778,926 - +0.1
778,926 - +0.5
779,057 - +0.4
779,057 - -0.5
779,078 + -0.6
779,079 - -0.6
779,079 - +0.9
779,079 - +0.3
779,187 + +0.1
779,194 - -0.4
779,251 + OHPLBJKB_00756 0.17 +0.4
779,251 + OHPLBJKB_00756 0.17 -0.6
779,251 + OHPLBJKB_00756 0.17 +0.4
779,286 + OHPLBJKB_00756 0.22 -0.4
779,286 + OHPLBJKB_00756 0.22 -1.1
779,286 + OHPLBJKB_00756 0.22 -1.5
779,287 - OHPLBJKB_00756 0.22 +0.0
779,287 - OHPLBJKB_00756 0.22 +0.3
779,465 + OHPLBJKB_00756 0.46 +0.2
779,465 + OHPLBJKB_00756 0.46 +0.9
779,466 - OHPLBJKB_00756 0.47 -0.8
779,512 - OHPLBJKB_00756 0.53 -0.2
779,584 - OHPLBJKB_00756 0.63 +0.1
779,587 - OHPLBJKB_00756 0.63 -0.3
779,596 - OHPLBJKB_00756 0.65 +1.3
779,601 - OHPLBJKB_00756 0.65 +1.0
779,625 - OHPLBJKB_00756 0.69 +0.1
779,625 - OHPLBJKB_00756 0.69 -0.0
779,658 + OHPLBJKB_00756 0.73 -0.9
779,691 + OHPLBJKB_00756 0.78 +0.1
779,691 + OHPLBJKB_00756 0.78 +0.0
779,691 + OHPLBJKB_00756 0.78 -1.0
779,691 + OHPLBJKB_00756 0.78 +0.5
779,691 + OHPLBJKB_00756 0.78 -0.1
779,691 + OHPLBJKB_00756 0.78 +0.9
779,692 - OHPLBJKB_00756 0.78 -1.1
779,692 - OHPLBJKB_00756 0.78 +0.7
779,692 - OHPLBJKB_00756 0.78 -0.9
779,692 - OHPLBJKB_00756 0.78 -1.4
779,692 - OHPLBJKB_00756 0.78 +0.3
779,692 - OHPLBJKB_00756 0.78 -0.7
779,692 - OHPLBJKB_00756 0.78 -0.6
779,692 - OHPLBJKB_00756 0.78 -0.4
779,692 - OHPLBJKB_00756 0.78 -0.4
779,713 - OHPLBJKB_00756 0.81 -0.2
779,713 - OHPLBJKB_00756 0.81 +0.1
779,713 - OHPLBJKB_00756 0.81 +0.8
779,724 + OHPLBJKB_00756 0.82 +1.4
779,724 + OHPLBJKB_00756 0.82 -0.5
779,725 - OHPLBJKB_00756 0.82 -0.3
779,725 - OHPLBJKB_00756 0.82 -0.1
779,725 - OHPLBJKB_00756 0.82 +0.7
779,750 - OHPLBJKB_00756 0.86 +0.0
779,750 - OHPLBJKB_00756 0.86 -1.2
779,750 - OHPLBJKB_00756 0.86 -1.1
779,828 + -0.1
779,828 + +1.1
779,828 + -1.6
779,828 + -0.5
779,828 + -0.0
779,829 - +0.6
779,829 - -0.9
779,848 + -0.0
779,849 - -1.0
779,849 - -0.2
779,864 + -0.6
779,945 + OHPLBJKB_00757 0.29 -0.5
779,945 + OHPLBJKB_00757 0.29 +0.0
779,945 + OHPLBJKB_00757 0.29 +0.6
779,946 - OHPLBJKB_00757 0.29 +0.9
779,946 - OHPLBJKB_00757 0.29 +0.3
779,966 + OHPLBJKB_00757 0.35 -0.7
779,966 + OHPLBJKB_00757 0.35 -0.5

Or see this region's nucleotide sequence