Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02637 and OHPLBJKB_02638 overlap by 4 nucleotides OHPLBJKB_02638 and OHPLBJKB_02639 are separated by 40 nucleotides OHPLBJKB_02639 and OHPLBJKB_02640 are separated by 586 nucleotides
OHPLBJKB_02637: OHPLBJKB_02637 - IS3 family transposase ISEc17, at 2,744,126 to 2,744,425
_02637
OHPLBJKB_02638: OHPLBJKB_02638 - IS3 family transposase IS3, at 2,744,422 to 2,745,288
_02638
OHPLBJKB_02639: OHPLBJKB_02639 - putative diguanylate cyclase DgcT, at 2,745,329 to 2,746,687
_02639
OHPLBJKB_02640: OHPLBJKB_02640 - Poly-beta-1,6-N-acetyl-D-glucosamine export protein, at 2,747,274 to 2,748,635
_02640
Position (kb)
2745
2746
2747 Strain fitness (log2 ratio)
-2
-1
0
1 at 2745.303 kb on + strand at 2745.303 kb on + strand at 2745.373 kb on + strand at 2745.400 kb on - strand at 2745.423 kb on + strand at 2745.424 kb on - strand at 2745.440 kb on + strand at 2745.495 kb on - strand, within OHPLBJKB_02639 at 2745.497 kb on - strand, within OHPLBJKB_02639 at 2745.501 kb on + strand, within OHPLBJKB_02639 at 2745.522 kb on - strand, within OHPLBJKB_02639 at 2745.642 kb on - strand, within OHPLBJKB_02639 at 2745.658 kb on + strand, within OHPLBJKB_02639 at 2746.105 kb on - strand, within OHPLBJKB_02639 at 2746.188 kb on - strand, within OHPLBJKB_02639 at 2746.229 kb on + strand, within OHPLBJKB_02639 at 2746.311 kb on - strand, within OHPLBJKB_02639 at 2746.652 kb on + strand at 2746.661 kb on - strand at 2746.712 kb on + strand at 2746.733 kb on + strand at 2746.796 kb on - strand at 2746.833 kb on + strand at 2746.834 kb on - strand at 2746.834 kb on - strand at 2746.834 kb on - strand at 2746.864 kb on + strand at 2746.865 kb on - strand at 2746.865 kb on - strand at 2746.865 kb on - strand at 2746.870 kb on + strand at 2746.913 kb on - strand at 2747.009 kb on + strand at 2747.113 kb on + strand at 2747.256 kb on + strand at 2747.277 kb on + strand at 2747.278 kb on - strand at 2747.420 kb on + strand, within OHPLBJKB_02640 at 2747.420 kb on + strand, within OHPLBJKB_02640 at 2747.421 kb on - strand, within OHPLBJKB_02640 at 2747.421 kb on - strand, within OHPLBJKB_02640 at 2747.421 kb on - strand, within OHPLBJKB_02640 at 2747.627 kb on + strand, within OHPLBJKB_02640 at 2747.628 kb on - strand, within OHPLBJKB_02640 at 2747.628 kb on - strand, within OHPLBJKB_02640
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 2,745,303 + +0.5 2,745,303 + -0.1 2,745,373 + -0.2 2,745,400 - +0.2 2,745,423 + +0.1 2,745,424 - -0.6 2,745,440 + -1.3 2,745,495 - OHPLBJKB_02639 0.12 -0.1 2,745,497 - OHPLBJKB_02639 0.12 +0.7 2,745,501 + OHPLBJKB_02639 0.13 +0.0 2,745,522 - OHPLBJKB_02639 0.14 +1.1 2,745,642 - OHPLBJKB_02639 0.23 +0.4 2,745,658 + OHPLBJKB_02639 0.24 -0.0 2,746,105 - OHPLBJKB_02639 0.57 -0.5 2,746,188 - OHPLBJKB_02639 0.63 +0.3 2,746,229 + OHPLBJKB_02639 0.66 -0.7 2,746,311 - OHPLBJKB_02639 0.72 +1.6 2,746,652 + -0.0 2,746,661 - +0.4 2,746,712 + +0.0 2,746,733 + +1.0 2,746,796 - +1.4 2,746,833 + -2.1 2,746,834 - +0.4 2,746,834 - +0.1 2,746,834 - -0.5 2,746,864 + -0.7 2,746,865 - -0.5 2,746,865 - +0.2 2,746,865 - +1.7 2,746,870 + +1.1 2,746,913 - -0.2 2,747,009 + +0.5 2,747,113 + -0.1 2,747,256 + -0.2 2,747,277 + +0.5 2,747,278 - +0.1 2,747,420 + OHPLBJKB_02640 0.11 -0.5 2,747,420 + OHPLBJKB_02640 0.11 -0.4 2,747,421 - OHPLBJKB_02640 0.11 +1.3 2,747,421 - OHPLBJKB_02640 0.11 +0.1 2,747,421 - OHPLBJKB_02640 0.11 -0.3 2,747,627 + OHPLBJKB_02640 0.26 -0.3 2,747,628 - OHPLBJKB_02640 0.26 +0.1 2,747,628 - OHPLBJKB_02640 0.26 +0.1
Or see this region's nucleotide sequence