Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02080 and OHPLBJKB_02081 overlap by 1 nucleotides OHPLBJKB_02081 and OHPLBJKB_02082 are separated by 2 nucleotides OHPLBJKB_02082 and OHPLBJKB_02083 are separated by 200 nucleotides OHPLBJKB_02083 and OHPLBJKB_02084 are separated by 46 nucleotides
OHPLBJKB_02080: OHPLBJKB_02080 - p-hydroxybenzoic acid efflux pump subunit AaeB, at 2,156,558 to 2,158,570
_02080
OHPLBJKB_02081: OHPLBJKB_02081 - p-hydroxybenzoic acid efflux pump subunit AaeA, at 2,158,570 to 2,159,427
_02081
OHPLBJKB_02082: OHPLBJKB_02082 - hypothetical protein, at 2,159,430 to 2,159,666
_02082
OHPLBJKB_02083: OHPLBJKB_02083 - Transcriptional regulator SlyA, at 2,159,867 to 2,160,301
_02083
OHPLBJKB_02084: OHPLBJKB_02084 - Outer membrane lipoprotein SlyB, at 2,160,348 to 2,160,815
_02084
Position (kb)
2158
2159
2160 Strain fitness (log2 ratio)
-2
-1
0
1 at 2157.579 kb on - strand, within OHPLBJKB_02080 at 2157.579 kb on - strand, within OHPLBJKB_02080 at 2157.579 kb on - strand, within OHPLBJKB_02080 at 2157.589 kb on + strand, within OHPLBJKB_02080 at 2157.590 kb on - strand, within OHPLBJKB_02080 at 2157.685 kb on + strand, within OHPLBJKB_02080 at 2157.699 kb on + strand, within OHPLBJKB_02080 at 2157.790 kb on + strand, within OHPLBJKB_02080 at 2157.790 kb on + strand, within OHPLBJKB_02080 at 2157.790 kb on + strand, within OHPLBJKB_02080 at 2157.790 kb on + strand, within OHPLBJKB_02080 at 2157.790 kb on + strand, within OHPLBJKB_02080 at 2157.791 kb on - strand, within OHPLBJKB_02080 at 2157.791 kb on - strand, within OHPLBJKB_02080 at 2157.791 kb on - strand, within OHPLBJKB_02080 at 2157.791 kb on - strand, within OHPLBJKB_02080 at 2157.824 kb on + strand, within OHPLBJKB_02080 at 2157.824 kb on + strand, within OHPLBJKB_02080 at 2157.824 kb on + strand, within OHPLBJKB_02080 at 2157.825 kb on - strand, within OHPLBJKB_02080 at 2157.825 kb on - strand, within OHPLBJKB_02080 at 2157.825 kb on - strand, within OHPLBJKB_02080 at 2157.876 kb on + strand, within OHPLBJKB_02080 at 2157.899 kb on - strand, within OHPLBJKB_02080 at 2157.921 kb on - strand, within OHPLBJKB_02080 at 2158.002 kb on - strand, within OHPLBJKB_02080 at 2158.058 kb on - strand, within OHPLBJKB_02080 at 2158.058 kb on - strand, within OHPLBJKB_02080 at 2158.153 kb on + strand, within OHPLBJKB_02080 at 2158.154 kb on - strand, within OHPLBJKB_02080 at 2158.156 kb on + strand, within OHPLBJKB_02080 at 2158.157 kb on - strand, within OHPLBJKB_02080 at 2158.157 kb on - strand, within OHPLBJKB_02080 at 2158.249 kb on + strand, within OHPLBJKB_02080 at 2158.281 kb on - strand, within OHPLBJKB_02080 at 2158.306 kb on + strand, within OHPLBJKB_02080 at 2158.307 kb on - strand, within OHPLBJKB_02080 at 2158.379 kb on - strand at 2158.449 kb on - strand at 2158.452 kb on + strand at 2158.590 kb on + strand at 2158.686 kb on + strand, within OHPLBJKB_02081 at 2158.687 kb on - strand, within OHPLBJKB_02081 at 2158.687 kb on - strand, within OHPLBJKB_02081 at 2158.790 kb on + strand, within OHPLBJKB_02081 at 2158.791 kb on - strand, within OHPLBJKB_02081 at 2158.797 kb on + strand, within OHPLBJKB_02081 at 2158.932 kb on + strand, within OHPLBJKB_02081 at 2158.933 kb on - strand, within OHPLBJKB_02081 at 2159.122 kb on - strand, within OHPLBJKB_02081 at 2159.248 kb on + strand, within OHPLBJKB_02081 at 2159.249 kb on - strand, within OHPLBJKB_02081 at 2159.251 kb on - strand, within OHPLBJKB_02081 at 2159.265 kb on + strand, within OHPLBJKB_02081 at 2159.265 kb on + strand, within OHPLBJKB_02081 at 2159.266 kb on - strand, within OHPLBJKB_02081 at 2159.289 kb on + strand, within OHPLBJKB_02081 at 2159.290 kb on - strand, within OHPLBJKB_02081 at 2159.342 kb on + strand at 2159.343 kb on - strand at 2159.343 kb on - strand at 2159.345 kb on + strand at 2159.346 kb on - strand at 2159.380 kb on + strand at 2159.409 kb on + strand at 2159.409 kb on + strand at 2159.427 kb on + strand at 2159.427 kb on + strand at 2159.428 kb on - strand at 2159.657 kb on + strand at 2159.691 kb on + strand at 2159.692 kb on - strand at 2159.693 kb on + strand at 2159.800 kb on + strand at 2159.800 kb on + strand at 2159.816 kb on + strand at 2159.817 kb on - strand at 2159.822 kb on - strand at 2159.952 kb on + strand, within OHPLBJKB_02083 at 2159.971 kb on + strand, within OHPLBJKB_02083 at 2159.976 kb on + strand, within OHPLBJKB_02083 at 2159.976 kb on + strand, within OHPLBJKB_02083 at 2160.133 kb on + strand, within OHPLBJKB_02083 at 2160.184 kb on + strand, within OHPLBJKB_02083 at 2160.248 kb on - strand, within OHPLBJKB_02083 at 2160.275 kb on - strand at 2160.345 kb on + strand at 2160.345 kb on + strand at 2160.346 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 2,157,579 - OHPLBJKB_02080 0.51 -0.4 2,157,579 - OHPLBJKB_02080 0.51 -0.4 2,157,579 - OHPLBJKB_02080 0.51 +0.4 2,157,589 + OHPLBJKB_02080 0.51 -1.2 2,157,590 - OHPLBJKB_02080 0.51 -0.1 2,157,685 + OHPLBJKB_02080 0.56 -0.2 2,157,699 + OHPLBJKB_02080 0.57 +0.8 2,157,790 + OHPLBJKB_02080 0.61 -0.3 2,157,790 + OHPLBJKB_02080 0.61 -0.0 2,157,790 + OHPLBJKB_02080 0.61 +0.9 2,157,790 + OHPLBJKB_02080 0.61 +0.1 2,157,790 + OHPLBJKB_02080 0.61 -0.4 2,157,791 - OHPLBJKB_02080 0.61 -0.8 2,157,791 - OHPLBJKB_02080 0.61 -0.0 2,157,791 - OHPLBJKB_02080 0.61 +0.2 2,157,791 - OHPLBJKB_02080 0.61 -0.6 2,157,824 + OHPLBJKB_02080 0.63 -1.2 2,157,824 + OHPLBJKB_02080 0.63 -0.4 2,157,824 + OHPLBJKB_02080 0.63 -1.2 2,157,825 - OHPLBJKB_02080 0.63 +0.6 2,157,825 - OHPLBJKB_02080 0.63 -0.3 2,157,825 - OHPLBJKB_02080 0.63 +0.6 2,157,876 + OHPLBJKB_02080 0.65 -1.2 2,157,899 - OHPLBJKB_02080 0.67 -0.4 2,157,921 - OHPLBJKB_02080 0.68 +0.2 2,158,002 - OHPLBJKB_02080 0.72 +0.9 2,158,058 - OHPLBJKB_02080 0.75 +0.5 2,158,058 - OHPLBJKB_02080 0.75 -1.9 2,158,153 + OHPLBJKB_02080 0.79 +0.5 2,158,154 - OHPLBJKB_02080 0.79 -1.4 2,158,156 + OHPLBJKB_02080 0.79 -0.7 2,158,157 - OHPLBJKB_02080 0.79 -0.6 2,158,157 - OHPLBJKB_02080 0.79 -0.5 2,158,249 + OHPLBJKB_02080 0.84 -1.0 2,158,281 - OHPLBJKB_02080 0.86 +0.0 2,158,306 + OHPLBJKB_02080 0.87 +0.2 2,158,307 - OHPLBJKB_02080 0.87 +0.7 2,158,379 - +0.0 2,158,449 - -0.5 2,158,452 + +1.6 2,158,590 + +0.2 2,158,686 + OHPLBJKB_02081 0.14 +0.3 2,158,687 - OHPLBJKB_02081 0.14 +0.9 2,158,687 - OHPLBJKB_02081 0.14 -2.1 2,158,790 + OHPLBJKB_02081 0.26 +0.6 2,158,791 - OHPLBJKB_02081 0.26 -1.4 2,158,797 + OHPLBJKB_02081 0.26 +0.3 2,158,932 + OHPLBJKB_02081 0.42 +0.5 2,158,933 - OHPLBJKB_02081 0.42 +0.2 2,159,122 - OHPLBJKB_02081 0.64 +1.7 2,159,248 + OHPLBJKB_02081 0.79 -0.2 2,159,249 - OHPLBJKB_02081 0.79 -0.8 2,159,251 - OHPLBJKB_02081 0.79 +0.0 2,159,265 + OHPLBJKB_02081 0.81 +0.1 2,159,265 + OHPLBJKB_02081 0.81 -0.5 2,159,266 - OHPLBJKB_02081 0.81 -0.4 2,159,289 + OHPLBJKB_02081 0.84 -0.3 2,159,290 - OHPLBJKB_02081 0.84 -0.6 2,159,342 + +0.3 2,159,343 - +0.4 2,159,343 - -0.7 2,159,345 + +1.3 2,159,346 - +0.6 2,159,380 + -1.1 2,159,409 + +1.0 2,159,409 + +0.5 2,159,427 + +0.0 2,159,427 + +1.0 2,159,428 - -0.4 2,159,657 + +0.2 2,159,691 + +0.3 2,159,692 - +1.7 2,159,693 + +0.2 2,159,800 + -0.7 2,159,800 + -0.1 2,159,816 + -1.3 2,159,817 - +0.2 2,159,822 - -0.6 2,159,952 + OHPLBJKB_02083 0.20 -0.7 2,159,971 + OHPLBJKB_02083 0.24 +0.2 2,159,976 + OHPLBJKB_02083 0.25 +0.3 2,159,976 + OHPLBJKB_02083 0.25 +0.4 2,160,133 + OHPLBJKB_02083 0.61 +0.6 2,160,184 + OHPLBJKB_02083 0.73 -1.3 2,160,248 - OHPLBJKB_02083 0.88 -0.4 2,160,275 - +0.2 2,160,345 + -0.4 2,160,345 + +1.4 2,160,346 - +0.4
Or see this region's nucleotide sequence