Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_15635

Experiment: R2A_PIPES with Cadmium chloride 128 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Cadmium chloride 128 uM
3,413,766	+				-0.9
3,413,766	+				-0.2
3,413,766	+				+0.5
3,413,767	-				-0.8
3,413,767	-				-0.1
3,413,767	-				+1.5
3,413,767	-				+1.2
3,413,907	+				-1.4
3,413,907	+				-0.3
3,413,907	+				-0.7
3,413,907	+				-0.5
3,413,907	+				-0.2
3,413,908	-				-0.6
3,413,908	-				-1.7
3,413,908	-				+0.7
3,413,908	-				-0.7
3,414,219	+		OKGIIK_15630	0.48	-0.8
3,414,219	+		OKGIIK_15630	0.48	+0.8
3,414,219	+		OKGIIK_15630	0.48	-1.9
3,414,219	+		OKGIIK_15630	0.48	-0.5
3,414,219	+		OKGIIK_15630	0.48	-0.4
3,414,219	+		OKGIIK_15630	0.48	-0.2
3,414,219	+		OKGIIK_15630	0.48	-1.4
3,414,219	+		OKGIIK_15630	0.48	-0.2
3,414,219	+		OKGIIK_15630	0.48	-0.4
3,414,219	+		OKGIIK_15630	0.48	-0.9
3,414,220	-		OKGIIK_15630	0.48	+0.8
3,414,220	-		OKGIIK_15630	0.48	-0.5
3,414,220	-		OKGIIK_15630	0.48	+0.5
3,414,220	-		OKGIIK_15630	0.48	-1.0
3,414,220	-		OKGIIK_15630	0.48	-1.4
3,414,220	-		OKGIIK_15630	0.48	-1.0
3,414,220	-		OKGIIK_15630	0.48	-0.1
3,414,264	+		OKGIIK_15630	0.54	-0.7
3,414,264	+		OKGIIK_15630	0.54	-0.1
3,414,264	+		OKGIIK_15630	0.54	+1.8
3,414,264	+		OKGIIK_15630	0.54	-0.5
3,414,264	+		OKGIIK_15630	0.54	-1.9
3,414,264	+		OKGIIK_15630	0.54	+0.6
3,414,264	+		OKGIIK_15630	0.54	-0.4
3,414,264	+		OKGIIK_15630	0.54	-0.2
3,414,264	+		OKGIIK_15630	0.54	+0.8
3,414,264	+		OKGIIK_15630	0.54	-0.8
3,414,265	-		OKGIIK_15630	0.54	-0.2
3,414,265	-		OKGIIK_15630	0.54	+1.1
3,414,265	-		OKGIIK_15630	0.54	+0.8
3,414,265	-		OKGIIK_15630	0.54	-0.1
3,414,265	-		OKGIIK_15630	0.54	+1.4
3,414,265	-		OKGIIK_15630	0.54	-0.2
3,414,265	-		OKGIIK_15630	0.54	-1.4
3,414,265	-		OKGIIK_15630	0.54	+2.0
3,414,265	-		OKGIIK_15630	0.54	-0.8
3,414,313	-		OKGIIK_15630	0.60	-0.7
3,414,313	-		OKGIIK_15630	0.60	-1.2
3,414,558	+				-0.5
3,414,558	+				-1.4
3,414,558	+				+0.4
3,414,558	+				-1.8
3,414,558	+				-0.2
3,414,559	-				-0.8
3,414,559	-				+0.9
3,414,630	+				-0.5
3,414,631	-				+0.6
3,414,631	-				+0.8
3,414,631	-				-3.0
3,414,631	-				-0.2
3,414,631	-				-0.8
3,414,692	-				-1.8
3,414,692	-				-0.4
3,414,736	-				-0.1
3,415,082	+		OKGIIK_15635	0.38	+0.1
3,415,082	+		OKGIIK_15635	0.38	-0.8
3,415,082	+		OKGIIK_15635	0.38	-0.3
3,415,082	+		OKGIIK_15635	0.38	+0.2
3,415,082	+		OKGIIK_15635	0.38	-0.9
3,415,083	-		OKGIIK_15635	0.38	-2.2
3,415,083	-		OKGIIK_15635	0.38	+0.9
3,415,083	-		OKGIIK_15635	0.38	+0.8
3,415,083	-		OKGIIK_15635	0.38	-0.8
3,415,083	-		OKGIIK_15635	0.38	-0.5
3,415,203	-		OKGIIK_15635	0.48	-0.8
3,415,203	-		OKGIIK_15635	0.48	-0.1
3,415,301	+		OKGIIK_15635	0.56	-0.3
3,415,301	+		OKGIIK_15635	0.56	-3.1
3,415,302	-		OKGIIK_15635	0.57	-1.7
3,415,302	-		OKGIIK_15635	0.57	-1.2
3,415,302	-		OKGIIK_15635	0.57	-0.5
3,415,302	-		OKGIIK_15635	0.57	-0.8
3,415,302	-		OKGIIK_15635	0.57	-1.7
3,415,337	+		OKGIIK_15635	0.59	-1.5
3,415,338	-		OKGIIK_15635	0.60	+1.1
3,415,338	-		OKGIIK_15635	0.60	-1.0
3,415,338	-		OKGIIK_15635	0.60	-0.1
3,415,338	-		OKGIIK_15635	0.60	-1.6
3,415,460	+		OKGIIK_15635	0.70	-0.7
3,415,460	+		OKGIIK_15635	0.70	+0.2
3,415,460	+		OKGIIK_15635	0.70	-2.5
3,415,460	+		OKGIIK_15635	0.70	-0.4
3,415,461	-		OKGIIK_15635	0.70	-1.7
3,415,574	+		OKGIIK_15635	0.79	-0.9
3,415,631	+		OKGIIK_15635	0.84	+0.6
3,415,631	+		OKGIIK_15635	0.84	-0.8
3,415,631	+		OKGIIK_15635	0.84	-0.8
3,415,631	+		OKGIIK_15635	0.84	-0.2
3,415,631	+		OKGIIK_15635	0.84	-1.2
3,415,631	+		OKGIIK_15635	0.84	+0.5
3,415,632	-		OKGIIK_15635	0.84	-0.8
3,415,632	-		OKGIIK_15635	0.84	+1.5
3,415,632	-		OKGIIK_15635	0.84	-0.5
3,415,632	-		OKGIIK_15635	0.84	-1.4
3,415,632	-		OKGIIK_15635	0.84	-0.2
3,415,632	-		OKGIIK_15635	0.84	-2.4
3,415,667	+		OKGIIK_15635	0.87	-0.6
3,415,667	+		OKGIIK_15635	0.87	-0.8
3,415,667	+		OKGIIK_15635	0.87	+0.1
3,415,667	+		OKGIIK_15635	0.87	+1.1
3,415,668	-		OKGIIK_15635	0.87	-2.0
3,415,668	-		OKGIIK_15635	0.87	-0.9
3,415,668	-		OKGIIK_15635	0.87	+1.4
3,415,668	-		OKGIIK_15635	0.87	-0.4
3,415,668	-		OKGIIK_15635	0.87	-0.2
3,415,720	+				-0.2
3,415,720	+				-1.0
3,415,998	+		OKGIIK_15640	0.20	-0.8
3,415,999	-		OKGIIK_15640	0.20	-1.0
3,415,999	-		OKGIIK_15640	0.20	-1.0
3,416,157	+		OKGIIK_15640	0.41	-0.5
3,416,158	-		OKGIIK_15640	0.41	-0.8
3,416,158	-		OKGIIK_15640	0.41	-1.0
3,416,176	-		OKGIIK_15640	0.43	-0.2
3,416,181	+		OKGIIK_15640	0.44	-2.1
3,416,181	+		OKGIIK_15640	0.44	-0.2
3,416,181	+		OKGIIK_15640	0.44	-0.8
3,416,181	+		OKGIIK_15640	0.44	-0.5
3,416,181	+		OKGIIK_15640	0.44	-1.7
3,416,181	+		OKGIIK_15640	0.44	+1.5
3,416,181	+		OKGIIK_15640	0.44	-0.3
3,416,181	+		OKGIIK_15640	0.44	+1.4
3,416,181	+		OKGIIK_15640	0.44	+0.2
3,416,181	+		OKGIIK_15640	0.44	+0.2
3,416,181	+		OKGIIK_15640	0.44	-1.2
3,416,181	+		OKGIIK_15640	0.44	+0.2
3,416,181	+		OKGIIK_15640	0.44	-1.4
3,416,181	+		OKGIIK_15640	0.44	-0.9
3,416,182	-		OKGIIK_15640	0.44	+0.2
3,416,182	-		OKGIIK_15640	0.44	+1.5
3,416,182	-		OKGIIK_15640	0.44	-0.8
3,416,182	-		OKGIIK_15640	0.44	+0.5
3,416,182	-		OKGIIK_15640	0.44	-0.8
3,416,182	-		OKGIIK_15640	0.44	-0.2
3,416,617	+				+1.1
3,416,617	+				-0.5
3,416,617	+				-1.2
3,416,617	+				-1.0
3,416,617	+				-0.8
3,416,617	+				+0.1
3,416,617	+				-1.4
3,416,714	+				-1.7
3,416,714	+				-0.5
3,416,714	+				+0.8
3,416,714	+				+1.3
3,416,714	+				-1.4
3,416,714	+				-0.8
3,416,714	+				-1.2
3,416,714	+				-2.5
3,416,714	+				-0.8
3,416,714	+				-0.7
3,416,715	-				-1.0
3,416,732	+				-0.1
3,416,732	+				+0.8
3,416,732	+				+0.7
3,416,732	+				-1.2
3,416,732	+				-1.2
3,416,732	+				+0.6
3,416,733	-				-1.1
3,416,733	-				+0.8
3,416,733	-				+0.8
3,416,733	-				-1.5
3,416,733	-				-0.1
3,416,733	-				-1.2
3,416,733	-				-0.5
3,416,811	-		OKGIIK_15645	0.15	-1.6
3,416,811	-		OKGIIK_15645	0.15	+1.8