Experiment: R2A_PIPES with Cadmium chloride 128 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_14145 and OKGIIK_14150 are separated by 2 nucleotides OKGIIK_14150 and OKGIIK_14155 are separated by 67 nucleotides OKGIIK_14155 and OKGIIK_14160 overlap by 4 nucleotides OKGIIK_14160 and lolE are separated by 5 nucleotides
OKGIIK_14145: OKGIIK_14145 - EamA domain-containing protein, at 3,074,980 to 3,075,357
_14145
OKGIIK_14150: OKGIIK_14150 - Alpha/beta hydrolase, at 3,075,360 to 3,076,202
_14150
OKGIIK_14155: OKGIIK_14155 - Secretion protein HlyD, at 3,076,270 to 3,077,250
_14155
OKGIIK_14160: OKGIIK_14160 - ABC transporter ATP-binding protein, at 3,077,247 to 3,077,999
_14160
OKGIIK_14165: lolE - ABC transporter permease, at 3,078,005 to 3,079,135
lolE
Position (kb)
3076
3077
3078 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.649 kb on + strand, within OKGIIK_14150 at 3075.649 kb on + strand, within OKGIIK_14150 at 3075.650 kb on - strand, within OKGIIK_14150 at 3075.847 kb on + strand, within OKGIIK_14150 at 3075.848 kb on - strand, within OKGIIK_14150 at 3075.865 kb on + strand, within OKGIIK_14150 at 3075.866 kb on - strand, within OKGIIK_14150 at 3075.866 kb on - strand, within OKGIIK_14150 at 3076.003 kb on + strand, within OKGIIK_14150 at 3076.003 kb on + strand, within OKGIIK_14150 at 3076.003 kb on + strand, within OKGIIK_14150 at 3076.003 kb on + strand, within OKGIIK_14150 at 3076.003 kb on + strand, within OKGIIK_14150 at 3076.003 kb on + strand, within OKGIIK_14150 at 3076.003 kb on + strand, within OKGIIK_14150 at 3076.004 kb on - strand, within OKGIIK_14150 at 3076.445 kb on + strand, within OKGIIK_14155 at 3076.445 kb on + strand, within OKGIIK_14155 at 3076.445 kb on + strand, within OKGIIK_14155 at 3076.445 kb on + strand, within OKGIIK_14155 at 3076.446 kb on - strand, within OKGIIK_14155 at 3076.446 kb on - strand, within OKGIIK_14155 at 3076.446 kb on - strand, within OKGIIK_14155 at 3076.446 kb on - strand, within OKGIIK_14155 at 3076.446 kb on - strand, within OKGIIK_14155 at 3076.446 kb on - strand, within OKGIIK_14155 at 3076.703 kb on + strand, within OKGIIK_14155 at 3076.704 kb on - strand, within OKGIIK_14155 at 3076.704 kb on - strand, within OKGIIK_14155 at 3077.100 kb on - strand, within OKGIIK_14155 at 3077.100 kb on - strand, within OKGIIK_14155 at 3077.100 kb on - strand, within OKGIIK_14155 at 3077.100 kb on - strand, within OKGIIK_14155 at 3077.100 kb on - strand, within OKGIIK_14155 at 3077.100 kb on - strand, within OKGIIK_14155 at 3077.100 kb on - strand, within OKGIIK_14155 at 3077.304 kb on + strand at 3077.304 kb on + strand at 3077.304 kb on + strand at 3077.304 kb on + strand at 3077.305 kb on - strand at 3077.305 kb on - strand at 3077.862 kb on + strand, within OKGIIK_14160 at 3077.862 kb on + strand, within OKGIIK_14160 at 3077.862 kb on + strand, within OKGIIK_14160 at 3077.862 kb on + strand, within OKGIIK_14160 at 3077.862 kb on + strand, within OKGIIK_14160 at 3077.862 kb on + strand, within OKGIIK_14160 at 3077.862 kb on + strand, within OKGIIK_14160 at 3077.862 kb on + strand, within OKGIIK_14160 at 3077.862 kb on + strand, within OKGIIK_14160 at 3077.862 kb on + strand, within OKGIIK_14160 at 3077.863 kb on - strand, within OKGIIK_14160 at 3077.863 kb on - strand, within OKGIIK_14160 at 3077.863 kb on - strand, within OKGIIK_14160 at 3077.863 kb on - strand, within OKGIIK_14160 at 3077.863 kb on - strand, within OKGIIK_14160 at 3077.863 kb on - strand, within OKGIIK_14160 at 3077.863 kb on - strand, within OKGIIK_14160 at 3077.863 kb on - strand, within OKGIIK_14160 at 3078.006 kb on + strand at 3078.006 kb on + strand at 3078.006 kb on + strand at 3078.007 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Cadmium chloride 128 uM remove 3,075,472 + OKGIIK_14150 0.13 -2.0 3,075,472 + OKGIIK_14150 0.13 -0.5 3,075,472 + OKGIIK_14150 0.13 -1.2 3,075,472 + OKGIIK_14150 0.13 +0.2 3,075,472 + OKGIIK_14150 0.13 +0.8 3,075,472 + OKGIIK_14150 0.13 -0.8 3,075,472 + OKGIIK_14150 0.13 +0.5 3,075,472 + OKGIIK_14150 0.13 -1.3 3,075,472 + OKGIIK_14150 0.13 -0.2 3,075,472 + OKGIIK_14150 0.13 -0.8 3,075,472 + OKGIIK_14150 0.13 -1.0 3,075,472 + OKGIIK_14150 0.13 -0.8 3,075,472 + OKGIIK_14150 0.13 +0.4 3,075,472 + OKGIIK_14150 0.13 -1.0 3,075,472 + OKGIIK_14150 0.13 -1.0 3,075,472 + OKGIIK_14150 0.13 -0.4 3,075,472 + OKGIIK_14150 0.13 -1.2 3,075,472 + OKGIIK_14150 0.13 -1.7 3,075,473 - OKGIIK_14150 0.13 +0.3 3,075,473 - OKGIIK_14150 0.13 +0.2 3,075,473 - OKGIIK_14150 0.13 +0.8 3,075,473 - OKGIIK_14150 0.13 -0.2 3,075,473 - OKGIIK_14150 0.13 -0.2 3,075,473 - OKGIIK_14150 0.13 -2.1 3,075,473 - OKGIIK_14150 0.13 -1.0 3,075,473 - OKGIIK_14150 0.13 -0.8 3,075,473 - OKGIIK_14150 0.13 +0.1 3,075,473 - OKGIIK_14150 0.13 -2.1 3,075,473 - OKGIIK_14150 0.13 -0.9 3,075,473 - OKGIIK_14150 0.13 -0.5 3,075,473 - OKGIIK_14150 0.13 -0.2 3,075,473 - OKGIIK_14150 0.13 -1.2 3,075,631 + OKGIIK_14150 0.32 -1.5 3,075,631 + OKGIIK_14150 0.32 -1.4 3,075,631 + OKGIIK_14150 0.32 -0.0 3,075,631 + OKGIIK_14150 0.32 -2.8 3,075,631 + OKGIIK_14150 0.32 -1.1 3,075,631 + OKGIIK_14150 0.32 -0.2 3,075,631 + OKGIIK_14150 0.32 -1.9 3,075,631 + OKGIIK_14150 0.32 -1.4 3,075,631 + OKGIIK_14150 0.32 -0.8 3,075,631 + OKGIIK_14150 0.32 +0.1 3,075,631 + OKGIIK_14150 0.32 -0.2 3,075,631 + OKGIIK_14150 0.32 -2.4 3,075,631 + OKGIIK_14150 0.32 -0.9 3,075,631 + OKGIIK_14150 0.32 -1.4 3,075,631 + OKGIIK_14150 0.32 -1.1 3,075,631 + OKGIIK_14150 0.32 -1.1 3,075,631 + OKGIIK_14150 0.32 -1.4 3,075,632 - OKGIIK_14150 0.32 -1.3 3,075,632 - OKGIIK_14150 0.32 -0.5 3,075,632 - OKGIIK_14150 0.32 -2.7 3,075,632 - OKGIIK_14150 0.32 -2.1 3,075,632 - OKGIIK_14150 0.32 -1.9 3,075,632 - OKGIIK_14150 0.32 -0.7 3,075,632 - OKGIIK_14150 0.32 -2.1 3,075,632 - OKGIIK_14150 0.32 -0.0 3,075,632 - OKGIIK_14150 0.32 -0.4 3,075,632 - OKGIIK_14150 0.32 -1.5 3,075,632 - OKGIIK_14150 0.32 -1.9 3,075,632 - OKGIIK_14150 0.32 -0.5 3,075,632 - OKGIIK_14150 0.32 -0.8 3,075,632 - OKGIIK_14150 0.32 -1.7 3,075,632 - OKGIIK_14150 0.32 +1.4 3,075,632 - OKGIIK_14150 0.32 -1.0 3,075,632 - OKGIIK_14150 0.32 +0.7 3,075,632 - OKGIIK_14150 0.32 -1.2 3,075,632 - OKGIIK_14150 0.32 -0.2 3,075,632 - OKGIIK_14150 0.32 +1.2 3,075,632 - OKGIIK_14150 0.32 -0.8 3,075,632 - OKGIIK_14150 0.32 -1.6 3,075,632 - OKGIIK_14150 0.32 -0.8 3,075,632 - OKGIIK_14150 0.32 +0.8 3,075,632 - OKGIIK_14150 0.32 -0.2 3,075,632 - OKGIIK_14150 0.32 -1.6 3,075,632 - OKGIIK_14150 0.32 -1.5 3,075,632 - OKGIIK_14150 0.32 -3.5 3,075,632 - OKGIIK_14150 0.32 -1.4 3,075,632 - OKGIIK_14150 0.32 -0.2 3,075,632 - OKGIIK_14150 0.32 -0.5 3,075,632 - OKGIIK_14150 0.32 -1.5 3,075,649 + OKGIIK_14150 0.34 -1.2 3,075,649 + OKGIIK_14150 0.34 +0.6 3,075,650 - OKGIIK_14150 0.34 +0.2 3,075,847 + OKGIIK_14150 0.58 -0.4 3,075,848 - OKGIIK_14150 0.58 -2.0 3,075,865 + OKGIIK_14150 0.60 -1.0 3,075,866 - OKGIIK_14150 0.60 -1.0 3,075,866 - OKGIIK_14150 0.60 -0.5 3,076,003 + OKGIIK_14150 0.76 -0.2 3,076,003 + OKGIIK_14150 0.76 +1.1 3,076,003 + OKGIIK_14150 0.76 -1.9 3,076,003 + OKGIIK_14150 0.76 -0.1 3,076,003 + OKGIIK_14150 0.76 +1.1 3,076,003 + OKGIIK_14150 0.76 -1.1 3,076,003 + OKGIIK_14150 0.76 -0.2 3,076,004 - OKGIIK_14150 0.76 -0.2 3,076,445 + OKGIIK_14155 0.18 -0.4 3,076,445 + OKGIIK_14155 0.18 +0.2 3,076,445 + OKGIIK_14155 0.18 -0.2 3,076,445 + OKGIIK_14155 0.18 -0.5 3,076,446 - OKGIIK_14155 0.18 -1.8 3,076,446 - OKGIIK_14155 0.18 -0.5 3,076,446 - OKGIIK_14155 0.18 -0.2 3,076,446 - OKGIIK_14155 0.18 -1.7 3,076,446 - OKGIIK_14155 0.18 -0.5 3,076,446 - OKGIIK_14155 0.18 -2.3 3,076,703 + OKGIIK_14155 0.44 -1.5 3,076,704 - OKGIIK_14155 0.44 -2.2 3,076,704 - OKGIIK_14155 0.44 -0.2 3,077,100 - OKGIIK_14155 0.85 +0.5 3,077,100 - OKGIIK_14155 0.85 -0.7 3,077,100 - OKGIIK_14155 0.85 -2.0 3,077,100 - OKGIIK_14155 0.85 -0.8 3,077,100 - OKGIIK_14155 0.85 -0.2 3,077,100 - OKGIIK_14155 0.85 -0.5 3,077,100 - OKGIIK_14155 0.85 +1.1 3,077,304 + -0.4 3,077,304 + -1.8 3,077,304 + -0.4 3,077,304 + +0.1 3,077,305 - -0.5 3,077,305 - +0.1 3,077,862 + OKGIIK_14160 0.82 -0.5 3,077,862 + OKGIIK_14160 0.82 -1.7 3,077,862 + OKGIIK_14160 0.82 +0.5 3,077,862 + OKGIIK_14160 0.82 -0.5 3,077,862 + OKGIIK_14160 0.82 -0.7 3,077,862 + OKGIIK_14160 0.82 -1.4 3,077,862 + OKGIIK_14160 0.82 -2.3 3,077,862 + OKGIIK_14160 0.82 -1.9 3,077,862 + OKGIIK_14160 0.82 -1.0 3,077,862 + OKGIIK_14160 0.82 +0.2 3,077,863 - OKGIIK_14160 0.82 -1.4 3,077,863 - OKGIIK_14160 0.82 -1.0 3,077,863 - OKGIIK_14160 0.82 +1.2 3,077,863 - OKGIIK_14160 0.82 -0.2 3,077,863 - OKGIIK_14160 0.82 -0.8 3,077,863 - OKGIIK_14160 0.82 -2.2 3,077,863 - OKGIIK_14160 0.82 -0.5 3,077,863 - OKGIIK_14160 0.82 -2.4 3,078,006 + -0.5 3,078,006 + +0.7 3,078,006 + -1.2 3,078,007 - -1.0
Or see this region's nucleotide sequence