Experiment: R2A_PIPES with Cadmium chloride 128 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_14135 and OKGIIK_14140 are separated by 22 nucleotides OKGIIK_14140 and OKGIIK_14145 overlap by 4 nucleotides OKGIIK_14145 and OKGIIK_14150 are separated by 2 nucleotides OKGIIK_14150 and OKGIIK_14155 are separated by 67 nucleotides
OKGIIK_14135: OKGIIK_14135 - Nucleotide sugar aminotransferase, at 3,073,348 to 3,074,553
_14135
OKGIIK_14140: OKGIIK_14140 - EamA domain-containing protein, at 3,074,576 to 3,074,983
_14140
OKGIIK_14145: OKGIIK_14145 - EamA domain-containing protein, at 3,074,980 to 3,075,357
_14145
OKGIIK_14150: OKGIIK_14150 - Alpha/beta hydrolase, at 3,075,360 to 3,076,202
_14150
OKGIIK_14155: OKGIIK_14155 - Secretion protein HlyD, at 3,076,270 to 3,077,250
_14155
Position (kb)
3075
3076
3077 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3074.564 kb on + strand at 3074.565 kb on - strand at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.472 kb on + strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.473 kb on - strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.631 kb on + strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.632 kb on - strand, within OKGIIK_14150 at 3075.649 kb on + strand, within OKGIIK_14150 at 3075.649 kb on + strand, within OKGIIK_14150 at 3075.650 kb on - strand, within OKGIIK_14150 at 3075.847 kb on + strand, within OKGIIK_14150 at 3075.848 kb on - strand, within OKGIIK_14150 at 3075.865 kb on + strand, within OKGIIK_14150 at 3075.866 kb on - strand, within OKGIIK_14150 at 3075.866 kb on - strand, within OKGIIK_14150 at 3076.003 kb on + strand, within OKGIIK_14150 at 3076.003 kb on + strand, within OKGIIK_14150 at 3076.003 kb on + strand, within OKGIIK_14150 at 3076.003 kb on + strand, within OKGIIK_14150 at 3076.003 kb on + strand, within OKGIIK_14150 at 3076.003 kb on + strand, within OKGIIK_14150 at 3076.003 kb on + strand, within OKGIIK_14150 at 3076.004 kb on - strand, within OKGIIK_14150 at 3076.445 kb on + strand, within OKGIIK_14155 at 3076.445 kb on + strand, within OKGIIK_14155 at 3076.445 kb on + strand, within OKGIIK_14155 at 3076.445 kb on + strand, within OKGIIK_14155 at 3076.446 kb on - strand, within OKGIIK_14155 at 3076.446 kb on - strand, within OKGIIK_14155 at 3076.446 kb on - strand, within OKGIIK_14155 at 3076.446 kb on - strand, within OKGIIK_14155 at 3076.446 kb on - strand, within OKGIIK_14155 at 3076.446 kb on - strand, within OKGIIK_14155 at 3076.703 kb on + strand, within OKGIIK_14155 at 3076.704 kb on - strand, within OKGIIK_14155 at 3076.704 kb on - strand, within OKGIIK_14155 at 3077.100 kb on - strand, within OKGIIK_14155 at 3077.100 kb on - strand, within OKGIIK_14155 at 3077.100 kb on - strand, within OKGIIK_14155 at 3077.100 kb on - strand, within OKGIIK_14155 at 3077.100 kb on - strand, within OKGIIK_14155 at 3077.100 kb on - strand, within OKGIIK_14155 at 3077.100 kb on - strand, within OKGIIK_14155
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Cadmium chloride 128 uM remove 3,074,564 + -2.2 3,074,565 - +0.3 3,075,472 + OKGIIK_14150 0.13 -2.0 3,075,472 + OKGIIK_14150 0.13 -0.5 3,075,472 + OKGIIK_14150 0.13 -1.2 3,075,472 + OKGIIK_14150 0.13 +0.2 3,075,472 + OKGIIK_14150 0.13 +0.8 3,075,472 + OKGIIK_14150 0.13 -0.8 3,075,472 + OKGIIK_14150 0.13 +0.5 3,075,472 + OKGIIK_14150 0.13 -1.3 3,075,472 + OKGIIK_14150 0.13 -0.2 3,075,472 + OKGIIK_14150 0.13 -0.8 3,075,472 + OKGIIK_14150 0.13 -1.0 3,075,472 + OKGIIK_14150 0.13 -0.8 3,075,472 + OKGIIK_14150 0.13 +0.4 3,075,472 + OKGIIK_14150 0.13 -1.0 3,075,472 + OKGIIK_14150 0.13 -1.0 3,075,472 + OKGIIK_14150 0.13 -0.4 3,075,472 + OKGIIK_14150 0.13 -1.2 3,075,472 + OKGIIK_14150 0.13 -1.7 3,075,473 - OKGIIK_14150 0.13 +0.3 3,075,473 - OKGIIK_14150 0.13 +0.2 3,075,473 - OKGIIK_14150 0.13 +0.8 3,075,473 - OKGIIK_14150 0.13 -0.2 3,075,473 - OKGIIK_14150 0.13 -0.2 3,075,473 - OKGIIK_14150 0.13 -2.1 3,075,473 - OKGIIK_14150 0.13 -1.0 3,075,473 - OKGIIK_14150 0.13 -0.8 3,075,473 - OKGIIK_14150 0.13 +0.1 3,075,473 - OKGIIK_14150 0.13 -2.1 3,075,473 - OKGIIK_14150 0.13 -0.9 3,075,473 - OKGIIK_14150 0.13 -0.5 3,075,473 - OKGIIK_14150 0.13 -0.2 3,075,473 - OKGIIK_14150 0.13 -1.2 3,075,631 + OKGIIK_14150 0.32 -1.5 3,075,631 + OKGIIK_14150 0.32 -1.4 3,075,631 + OKGIIK_14150 0.32 -0.0 3,075,631 + OKGIIK_14150 0.32 -2.8 3,075,631 + OKGIIK_14150 0.32 -1.1 3,075,631 + OKGIIK_14150 0.32 -0.2 3,075,631 + OKGIIK_14150 0.32 -1.9 3,075,631 + OKGIIK_14150 0.32 -1.4 3,075,631 + OKGIIK_14150 0.32 -0.8 3,075,631 + OKGIIK_14150 0.32 +0.1 3,075,631 + OKGIIK_14150 0.32 -0.2 3,075,631 + OKGIIK_14150 0.32 -2.4 3,075,631 + OKGIIK_14150 0.32 -0.9 3,075,631 + OKGIIK_14150 0.32 -1.4 3,075,631 + OKGIIK_14150 0.32 -1.1 3,075,631 + OKGIIK_14150 0.32 -1.1 3,075,631 + OKGIIK_14150 0.32 -1.4 3,075,632 - OKGIIK_14150 0.32 -1.3 3,075,632 - OKGIIK_14150 0.32 -0.5 3,075,632 - OKGIIK_14150 0.32 -2.7 3,075,632 - OKGIIK_14150 0.32 -2.1 3,075,632 - OKGIIK_14150 0.32 -1.9 3,075,632 - OKGIIK_14150 0.32 -0.7 3,075,632 - OKGIIK_14150 0.32 -2.1 3,075,632 - OKGIIK_14150 0.32 -0.0 3,075,632 - OKGIIK_14150 0.32 -0.4 3,075,632 - OKGIIK_14150 0.32 -1.5 3,075,632 - OKGIIK_14150 0.32 -1.9 3,075,632 - OKGIIK_14150 0.32 -0.5 3,075,632 - OKGIIK_14150 0.32 -0.8 3,075,632 - OKGIIK_14150 0.32 -1.7 3,075,632 - OKGIIK_14150 0.32 +1.4 3,075,632 - OKGIIK_14150 0.32 -1.0 3,075,632 - OKGIIK_14150 0.32 +0.7 3,075,632 - OKGIIK_14150 0.32 -1.2 3,075,632 - OKGIIK_14150 0.32 -0.2 3,075,632 - OKGIIK_14150 0.32 +1.2 3,075,632 - OKGIIK_14150 0.32 -0.8 3,075,632 - OKGIIK_14150 0.32 -1.6 3,075,632 - OKGIIK_14150 0.32 -0.8 3,075,632 - OKGIIK_14150 0.32 +0.8 3,075,632 - OKGIIK_14150 0.32 -0.2 3,075,632 - OKGIIK_14150 0.32 -1.6 3,075,632 - OKGIIK_14150 0.32 -1.5 3,075,632 - OKGIIK_14150 0.32 -3.5 3,075,632 - OKGIIK_14150 0.32 -1.4 3,075,632 - OKGIIK_14150 0.32 -0.2 3,075,632 - OKGIIK_14150 0.32 -0.5 3,075,632 - OKGIIK_14150 0.32 -1.5 3,075,649 + OKGIIK_14150 0.34 -1.2 3,075,649 + OKGIIK_14150 0.34 +0.6 3,075,650 - OKGIIK_14150 0.34 +0.2 3,075,847 + OKGIIK_14150 0.58 -0.4 3,075,848 - OKGIIK_14150 0.58 -2.0 3,075,865 + OKGIIK_14150 0.60 -1.0 3,075,866 - OKGIIK_14150 0.60 -1.0 3,075,866 - OKGIIK_14150 0.60 -0.5 3,076,003 + OKGIIK_14150 0.76 -0.2 3,076,003 + OKGIIK_14150 0.76 +1.1 3,076,003 + OKGIIK_14150 0.76 -1.9 3,076,003 + OKGIIK_14150 0.76 -0.1 3,076,003 + OKGIIK_14150 0.76 +1.1 3,076,003 + OKGIIK_14150 0.76 -1.1 3,076,003 + OKGIIK_14150 0.76 -0.2 3,076,004 - OKGIIK_14150 0.76 -0.2 3,076,445 + OKGIIK_14155 0.18 -0.4 3,076,445 + OKGIIK_14155 0.18 +0.2 3,076,445 + OKGIIK_14155 0.18 -0.2 3,076,445 + OKGIIK_14155 0.18 -0.5 3,076,446 - OKGIIK_14155 0.18 -1.8 3,076,446 - OKGIIK_14155 0.18 -0.5 3,076,446 - OKGIIK_14155 0.18 -0.2 3,076,446 - OKGIIK_14155 0.18 -1.7 3,076,446 - OKGIIK_14155 0.18 -0.5 3,076,446 - OKGIIK_14155 0.18 -2.3 3,076,703 + OKGIIK_14155 0.44 -1.5 3,076,704 - OKGIIK_14155 0.44 -2.2 3,076,704 - OKGIIK_14155 0.44 -0.2 3,077,100 - OKGIIK_14155 0.85 +0.5 3,077,100 - OKGIIK_14155 0.85 -0.7 3,077,100 - OKGIIK_14155 0.85 -2.0 3,077,100 - OKGIIK_14155 0.85 -0.8 3,077,100 - OKGIIK_14155 0.85 -0.2 3,077,100 - OKGIIK_14155 0.85 -0.5 3,077,100 - OKGIIK_14155 0.85 +1.1
Or see this region's nucleotide sequence