Experiment: R2A_PIPES with Cadmium chloride 128 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_14105 and fabB are separated by 408 nucleotides fabB and OKGIIK_14115 overlap by 1 nucleotides OKGIIK_14115 and OKGIIK_14120 are separated by 95 nucleotides
OKGIIK_14105: OKGIIK_14105 - hypothetical protein, at 3,066,614 to 3,067,642
_14105
OKGIIK_14110: fabB - 3-oxoacyl-(acyl-carrier-protein) synthase, at 3,068,051 to 3,069,283
fabB
OKGIIK_14115: OKGIIK_14115 - Phosphopantetheine-binding protein, at 3,069,283 to 3,069,555
_14115
OKGIIK_14120: OKGIIK_14120 - putative N-acyltransferase, at 3,069,651 to 3,070,721
_14120
Position (kb)
3068
3069
3070 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3067.085 kb on + strand, within OKGIIK_14105 at 3067.085 kb on + strand, within OKGIIK_14105 at 3067.085 kb on + strand, within OKGIIK_14105 at 3067.085 kb on + strand, within OKGIIK_14105 at 3067.085 kb on + strand, within OKGIIK_14105 at 3067.085 kb on + strand, within OKGIIK_14105 at 3067.086 kb on - strand, within OKGIIK_14105 at 3067.086 kb on - strand, within OKGIIK_14105 at 3067.086 kb on - strand, within OKGIIK_14105 at 3067.086 kb on - strand, within OKGIIK_14105 at 3067.086 kb on - strand, within OKGIIK_14105 at 3067.243 kb on + strand, within OKGIIK_14105 at 3067.243 kb on + strand, within OKGIIK_14105 at 3067.260 kb on + strand, within OKGIIK_14105 at 3067.260 kb on + strand, within OKGIIK_14105 at 3067.260 kb on + strand, within OKGIIK_14105 at 3067.260 kb on + strand, within OKGIIK_14105 at 3067.260 kb on + strand, within OKGIIK_14105 at 3067.260 kb on + strand, within OKGIIK_14105 at 3067.260 kb on + strand, within OKGIIK_14105 at 3067.260 kb on + strand, within OKGIIK_14105 at 3067.260 kb on + strand, within OKGIIK_14105 at 3067.260 kb on + strand, within OKGIIK_14105 at 3067.260 kb on + strand, within OKGIIK_14105 at 3067.260 kb on + strand, within OKGIIK_14105 at 3067.260 kb on + strand, within OKGIIK_14105 at 3067.261 kb on - strand, within OKGIIK_14105 at 3067.261 kb on - strand, within OKGIIK_14105 at 3067.261 kb on - strand, within OKGIIK_14105 at 3067.261 kb on - strand, within OKGIIK_14105 at 3067.261 kb on - strand, within OKGIIK_14105 at 3067.261 kb on - strand, within OKGIIK_14105 at 3067.261 kb on - strand, within OKGIIK_14105 at 3067.261 kb on - strand, within OKGIIK_14105 at 3067.261 kb on - strand, within OKGIIK_14105 at 3067.261 kb on - strand, within OKGIIK_14105 at 3067.261 kb on - strand, within OKGIIK_14105 at 3067.261 kb on - strand, within OKGIIK_14105 at 3067.261 kb on - strand, within OKGIIK_14105 at 3067.261 kb on - strand, within OKGIIK_14105 at 3067.261 kb on - strand, within OKGIIK_14105 at 3067.261 kb on - strand, within OKGIIK_14105 at 3067.261 kb on - strand, within OKGIIK_14105 at 3067.261 kb on - strand, within OKGIIK_14105 at 3067.261 kb on - strand, within OKGIIK_14105 at 3067.326 kb on + strand, within OKGIIK_14105 at 3067.326 kb on + strand, within OKGIIK_14105 at 3067.427 kb on - strand, within OKGIIK_14105 at 3067.427 kb on - strand, within OKGIIK_14105 at 3067.509 kb on + strand, within OKGIIK_14105 at 3067.509 kb on + strand, within OKGIIK_14105 at 3067.509 kb on + strand, within OKGIIK_14105 at 3067.509 kb on + strand, within OKGIIK_14105 at 3067.509 kb on + strand, within OKGIIK_14105 at 3067.510 kb on - strand, within OKGIIK_14105 at 3067.510 kb on - strand, within OKGIIK_14105 at 3067.510 kb on - strand, within OKGIIK_14105 at 3067.510 kb on - strand, within OKGIIK_14105 at 3067.924 kb on + strand at 3067.967 kb on + strand at 3067.967 kb on + strand at 3067.967 kb on + strand at 3067.967 kb on + strand at 3067.967 kb on + strand at 3067.967 kb on + strand at 3067.967 kb on + strand at 3067.967 kb on + strand at 3067.967 kb on + strand at 3067.967 kb on + strand at 3067.967 kb on + strand at 3067.968 kb on - strand at 3067.968 kb on - strand at 3067.968 kb on - strand at 3067.968 kb on - strand at 3067.968 kb on - strand at 3067.968 kb on - strand at 3067.968 kb on - strand at 3067.982 kb on + strand at 3067.983 kb on - strand at 3068.154 kb on + strand at 3068.154 kb on + strand at 3068.154 kb on + strand at 3068.154 kb on + strand at 3068.154 kb on + strand at 3068.154 kb on + strand at 3068.154 kb on + strand at 3068.154 kb on + strand at 3068.154 kb on + strand at 3068.154 kb on + strand at 3068.154 kb on + strand at 3068.154 kb on + strand at 3068.154 kb on + strand at 3068.155 kb on - strand at 3068.155 kb on - strand at 3068.155 kb on - strand at 3068.155 kb on - strand at 3068.155 kb on - strand at 3068.155 kb on - strand at 3068.155 kb on - strand at 3068.155 kb on - strand at 3068.155 kb on - strand at 3068.155 kb on - strand at 3068.155 kb on - strand at 3068.394 kb on + strand, within fabB at 3068.394 kb on + strand, within fabB at 3068.394 kb on + strand, within fabB at 3068.394 kb on + strand, within fabB at 3068.394 kb on + strand, within fabB at 3068.394 kb on + strand, within fabB at 3068.394 kb on + strand, within fabB at 3068.394 kb on + strand, within fabB at 3068.395 kb on - strand, within fabB at 3068.395 kb on - strand, within fabB at 3068.395 kb on - strand, within fabB at 3068.395 kb on - strand, within fabB at 3068.395 kb on - strand, within fabB at 3068.395 kb on - strand, within fabB at 3068.679 kb on + strand, within fabB at 3068.679 kb on + strand, within fabB at 3068.679 kb on + strand, within fabB at 3068.679 kb on + strand, within fabB at 3068.680 kb on - strand, within fabB at 3068.680 kb on - strand, within fabB at 3068.680 kb on - strand, within fabB at 3068.680 kb on - strand, within fabB at 3068.680 kb on - strand, within fabB at 3068.901 kb on + strand, within fabB at 3068.902 kb on - strand, within fabB at 3068.902 kb on - strand, within fabB at 3069.615 kb on + strand at 3069.615 kb on + strand at 3069.615 kb on + strand at 3069.616 kb on - strand at 3069.616 kb on - strand at 3069.616 kb on - strand at 3069.616 kb on - strand at 3069.616 kb on - strand at 3069.616 kb on - strand at 3069.616 kb on - strand at 3069.616 kb on - strand at 3069.632 kb on + strand at 3069.633 kb on - strand at 3069.633 kb on - strand at 3069.646 kb on + strand at 3069.646 kb on + strand at 3069.646 kb on + strand at 3069.646 kb on + strand at 3069.647 kb on - strand at 3069.647 kb on - strand at 3069.891 kb on + strand, within OKGIIK_14120 at 3069.892 kb on - strand, within OKGIIK_14120 at 3070.131 kb on + strand, within OKGIIK_14120 at 3070.131 kb on + strand, within OKGIIK_14120 at 3070.131 kb on + strand, within OKGIIK_14120 at 3070.131 kb on + strand, within OKGIIK_14120 at 3070.131 kb on + strand, within OKGIIK_14120 at 3070.131 kb on + strand, within OKGIIK_14120 at 3070.131 kb on + strand, within OKGIIK_14120 at 3070.132 kb on - strand, within OKGIIK_14120 at 3070.132 kb on - strand, within OKGIIK_14120 at 3070.132 kb on - strand, within OKGIIK_14120 at 3070.132 kb on - strand, within OKGIIK_14120 at 3070.132 kb on - strand, within OKGIIK_14120 at 3070.149 kb on + strand, within OKGIIK_14120 at 3070.149 kb on + strand, within OKGIIK_14120 at 3070.149 kb on + strand, within OKGIIK_14120 at 3070.149 kb on + strand, within OKGIIK_14120 at 3070.149 kb on + strand, within OKGIIK_14120 at 3070.149 kb on + strand, within OKGIIK_14120 at 3070.149 kb on + strand, within OKGIIK_14120 at 3070.150 kb on - strand, within OKGIIK_14120 at 3070.150 kb on - strand, within OKGIIK_14120 at 3070.150 kb on - strand, within OKGIIK_14120 at 3070.150 kb on - strand, within OKGIIK_14120 at 3070.150 kb on - strand, within OKGIIK_14120
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Cadmium chloride 128 uM remove 3,067,085 + OKGIIK_14105 0.46 -1.1 3,067,085 + OKGIIK_14105 0.46 -0.9 3,067,085 + OKGIIK_14105 0.46 -1.4 3,067,085 + OKGIIK_14105 0.46 -0.2 3,067,085 + OKGIIK_14105 0.46 +0.6 3,067,085 + OKGIIK_14105 0.46 +0.6 3,067,086 - OKGIIK_14105 0.46 -1.2 3,067,086 - OKGIIK_14105 0.46 -3.1 3,067,086 - OKGIIK_14105 0.46 -0.2 3,067,086 - OKGIIK_14105 0.46 -0.5 3,067,086 - OKGIIK_14105 0.46 -2.4 3,067,243 + OKGIIK_14105 0.61 +0.8 3,067,243 + OKGIIK_14105 0.61 -1.5 3,067,260 + OKGIIK_14105 0.63 -1.2 3,067,260 + OKGIIK_14105 0.63 -0.5 3,067,260 + OKGIIK_14105 0.63 -1.5 3,067,260 + OKGIIK_14105 0.63 -0.2 3,067,260 + OKGIIK_14105 0.63 -1.0 3,067,260 + OKGIIK_14105 0.63 +1.5 3,067,260 + OKGIIK_14105 0.63 -2.4 3,067,260 + OKGIIK_14105 0.63 -1.1 3,067,260 + OKGIIK_14105 0.63 -1.2 3,067,260 + OKGIIK_14105 0.63 -2.4 3,067,260 + OKGIIK_14105 0.63 +0.7 3,067,260 + OKGIIK_14105 0.63 -1.7 3,067,260 + OKGIIK_14105 0.63 +0.4 3,067,261 - OKGIIK_14105 0.63 +0.3 3,067,261 - OKGIIK_14105 0.63 -0.8 3,067,261 - OKGIIK_14105 0.63 -0.5 3,067,261 - OKGIIK_14105 0.63 +1.3 3,067,261 - OKGIIK_14105 0.63 -0.8 3,067,261 - OKGIIK_14105 0.63 -0.6 3,067,261 - OKGIIK_14105 0.63 -0.6 3,067,261 - OKGIIK_14105 0.63 +0.5 3,067,261 - OKGIIK_14105 0.63 -1.7 3,067,261 - OKGIIK_14105 0.63 -1.0 3,067,261 - OKGIIK_14105 0.63 +0.8 3,067,261 - OKGIIK_14105 0.63 -2.0 3,067,261 - OKGIIK_14105 0.63 -0.2 3,067,261 - OKGIIK_14105 0.63 -0.7 3,067,261 - OKGIIK_14105 0.63 -1.4 3,067,261 - OKGIIK_14105 0.63 -0.7 3,067,261 - OKGIIK_14105 0.63 -0.2 3,067,261 - OKGIIK_14105 0.63 +0.2 3,067,261 - OKGIIK_14105 0.63 -0.2 3,067,326 + OKGIIK_14105 0.69 -1.2 3,067,326 + OKGIIK_14105 0.69 -0.8 3,067,427 - OKGIIK_14105 0.79 -0.3 3,067,427 - OKGIIK_14105 0.79 +0.6 3,067,509 + OKGIIK_14105 0.87 +1.1 3,067,509 + OKGIIK_14105 0.87 -0.2 3,067,509 + OKGIIK_14105 0.87 +0.8 3,067,509 + OKGIIK_14105 0.87 +0.2 3,067,509 + OKGIIK_14105 0.87 +0.8 3,067,510 - OKGIIK_14105 0.87 +0.5 3,067,510 - OKGIIK_14105 0.87 +2.4 3,067,510 - OKGIIK_14105 0.87 -0.2 3,067,510 - OKGIIK_14105 0.87 +0.4 3,067,924 + -1.4 3,067,967 + +1.0 3,067,967 + -0.2 3,067,967 + +0.2 3,067,967 + -0.9 3,067,967 + +0.3 3,067,967 + -2.0 3,067,967 + -1.9 3,067,967 + -0.2 3,067,967 + -0.2 3,067,967 + -0.5 3,067,967 + +0.1 3,067,968 - +0.7 3,067,968 - +1.3 3,067,968 - -1.0 3,067,968 - +0.2 3,067,968 - +0.4 3,067,968 - -0.2 3,067,968 - -0.5 3,067,982 + -0.8 3,067,983 - -0.8 3,068,154 + -0.5 3,068,154 + -1.0 3,068,154 + -1.2 3,068,154 + -0.4 3,068,154 + -1.2 3,068,154 + -1.0 3,068,154 + -0.2 3,068,154 + +0.4 3,068,154 + -0.2 3,068,154 + -1.3 3,068,154 + -0.5 3,068,154 + -1.2 3,068,154 + +1.4 3,068,155 - -1.2 3,068,155 - +1.0 3,068,155 - +0.8 3,068,155 - -1.3 3,068,155 - -1.4 3,068,155 - -1.9 3,068,155 - -3.6 3,068,155 - -0.5 3,068,155 - -2.2 3,068,155 - -0.2 3,068,155 - +0.3 3,068,394 + fabB OKGIIK_14110 0.28 -0.2 3,068,394 + fabB OKGIIK_14110 0.28 -1.4 3,068,394 + fabB OKGIIK_14110 0.28 +0.6 3,068,394 + fabB OKGIIK_14110 0.28 -1.5 3,068,394 + fabB OKGIIK_14110 0.28 -1.4 3,068,394 + fabB OKGIIK_14110 0.28 -1.4 3,068,394 + fabB OKGIIK_14110 0.28 +0.5 3,068,394 + fabB OKGIIK_14110 0.28 -1.7 3,068,395 - fabB OKGIIK_14110 0.28 -1.0 3,068,395 - fabB OKGIIK_14110 0.28 +0.4 3,068,395 - fabB OKGIIK_14110 0.28 +2.1 3,068,395 - fabB OKGIIK_14110 0.28 -1.0 3,068,395 - fabB OKGIIK_14110 0.28 -0.5 3,068,395 - fabB OKGIIK_14110 0.28 -0.2 3,068,679 + fabB OKGIIK_14110 0.51 -0.5 3,068,679 + fabB OKGIIK_14110 0.51 -2.4 3,068,679 + fabB OKGIIK_14110 0.51 -0.5 3,068,679 + fabB OKGIIK_14110 0.51 -2.2 3,068,680 - fabB OKGIIK_14110 0.51 -0.5 3,068,680 - fabB OKGIIK_14110 0.51 -1.5 3,068,680 - fabB OKGIIK_14110 0.51 +1.4 3,068,680 - fabB OKGIIK_14110 0.51 -1.2 3,068,680 - fabB OKGIIK_14110 0.51 +0.8 3,068,901 + fabB OKGIIK_14110 0.69 -1.5 3,068,902 - fabB OKGIIK_14110 0.69 +0.8 3,068,902 - fabB OKGIIK_14110 0.69 +1.7 3,069,615 + -1.4 3,069,615 + -1.8 3,069,615 + -1.4 3,069,616 - +0.8 3,069,616 - -2.2 3,069,616 - -0.9 3,069,616 - +0.3 3,069,616 - -1.5 3,069,616 - -2.5 3,069,616 - -2.3 3,069,616 - -0.5 3,069,632 + -2.1 3,069,633 - -0.8 3,069,633 - -0.8 3,069,646 + -0.4 3,069,646 + -1.9 3,069,646 + +0.2 3,069,646 + -0.6 3,069,647 - -0.8 3,069,647 - +0.6 3,069,891 + OKGIIK_14120 0.22 -0.4 3,069,892 - OKGIIK_14120 0.23 +0.6 3,070,131 + OKGIIK_14120 0.45 -0.8 3,070,131 + OKGIIK_14120 0.45 -1.8 3,070,131 + OKGIIK_14120 0.45 +1.8 3,070,131 + OKGIIK_14120 0.45 -2.0 3,070,131 + OKGIIK_14120 0.45 -1.9 3,070,131 + OKGIIK_14120 0.45 -1.2 3,070,131 + OKGIIK_14120 0.45 -0.8 3,070,132 - OKGIIK_14120 0.45 -0.2 3,070,132 - OKGIIK_14120 0.45 -0.5 3,070,132 - OKGIIK_14120 0.45 -1.5 3,070,132 - OKGIIK_14120 0.45 -0.9 3,070,132 - OKGIIK_14120 0.45 -1.6 3,070,149 + OKGIIK_14120 0.46 -0.8 3,070,149 + OKGIIK_14120 0.46 +0.3 3,070,149 + OKGIIK_14120 0.46 -0.3 3,070,149 + OKGIIK_14120 0.46 -0.2 3,070,149 + OKGIIK_14120 0.46 -0.7 3,070,149 + OKGIIK_14120 0.46 -0.8 3,070,149 + OKGIIK_14120 0.46 -1.8 3,070,150 - OKGIIK_14120 0.47 -0.4 3,070,150 - OKGIIK_14120 0.47 -1.4 3,070,150 - OKGIIK_14120 0.47 +0.5 3,070,150 - OKGIIK_14120 0.47 -1.4 3,070,150 - OKGIIK_14120 0.47 +1.1
Or see this region's nucleotide sequence