Experiment: R2A_PIPES with Cadmium chloride 128 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_11485 and OKGIIK_11490 overlap by 13 nucleotides OKGIIK_11490 and OKGIIK_11495 are separated by 91 nucleotides OKGIIK_11495 and OKGIIK_11500 are separated by 130 nucleotides OKGIIK_11500 and purL are separated by 29 nucleotides
OKGIIK_11485: OKGIIK_11485 - DUF2127 domain-containing protein, at 2,465,395 to 2,465,919
_11485
OKGIIK_11490: OKGIIK_11490 - Permease, at 2,465,907 to 2,466,800
_11490
OKGIIK_11495: OKGIIK_11495 - Glycosyl transferase family 2, at 2,466,892 to 2,467,734
_11495
OKGIIK_11500: OKGIIK_11500 - hypothetical protein, at 2,467,865 to 2,468,611
_11500
OKGIIK_11505: purL - phosphoribosylformylglycinamidine synthase, at 2,468,641 to 2,472,507
purL
Position (kb)
2466
2467
2468 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2465.971 kb on + strand at 2465.971 kb on + strand at 2465.971 kb on + strand at 2465.971 kb on + strand at 2465.971 kb on + strand at 2465.971 kb on + strand at 2465.971 kb on + strand at 2465.971 kb on + strand at 2465.972 kb on - strand at 2465.972 kb on - strand at 2465.972 kb on - strand at 2465.972 kb on - strand at 2465.972 kb on - strand at 2465.972 kb on - strand at 2465.972 kb on - strand at 2465.972 kb on - strand at 2465.972 kb on - strand at 2466.163 kb on + strand, within OKGIIK_11490 at 2466.163 kb on + strand, within OKGIIK_11490 at 2466.163 kb on + strand, within OKGIIK_11490 at 2466.163 kb on + strand, within OKGIIK_11490 at 2466.163 kb on + strand, within OKGIIK_11490 at 2466.163 kb on + strand, within OKGIIK_11490 at 2466.163 kb on + strand, within OKGIIK_11490 at 2466.163 kb on + strand, within OKGIIK_11490 at 2466.163 kb on + strand, within OKGIIK_11490 at 2466.163 kb on + strand, within OKGIIK_11490 at 2466.163 kb on + strand, within OKGIIK_11490 at 2466.163 kb on + strand, within OKGIIK_11490 at 2466.163 kb on + strand, within OKGIIK_11490 at 2466.163 kb on + strand, within OKGIIK_11490 at 2466.163 kb on + strand, within OKGIIK_11490 at 2466.163 kb on + strand, within OKGIIK_11490 at 2466.163 kb on + strand, within OKGIIK_11490 at 2466.163 kb on + strand, within OKGIIK_11490 at 2466.163 kb on + strand, within OKGIIK_11490 at 2466.163 kb on + strand, within OKGIIK_11490 at 2466.163 kb on + strand, within OKGIIK_11490 at 2466.163 kb on + strand, within OKGIIK_11490 at 2466.163 kb on + strand, within OKGIIK_11490 at 2466.163 kb on + strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.164 kb on - strand, within OKGIIK_11490 at 2466.325 kb on + strand, within OKGIIK_11490 at 2466.325 kb on + strand, within OKGIIK_11490 at 2466.326 kb on - strand, within OKGIIK_11490 at 2466.326 kb on - strand, within OKGIIK_11490 at 2466.326 kb on - strand, within OKGIIK_11490 at 2466.326 kb on - strand, within OKGIIK_11490 at 2466.326 kb on - strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.490 kb on + strand, within OKGIIK_11490 at 2466.491 kb on - strand, within OKGIIK_11490 at 2466.491 kb on - strand, within OKGIIK_11490 at 2466.491 kb on - strand, within OKGIIK_11490 at 2466.491 kb on - strand, within OKGIIK_11490 at 2466.491 kb on - strand, within OKGIIK_11490 at 2466.491 kb on - strand, within OKGIIK_11490 at 2466.491 kb on - strand, within OKGIIK_11490 at 2466.491 kb on - strand, within OKGIIK_11490 at 2466.491 kb on - strand, within OKGIIK_11490 at 2466.491 kb on - strand, within OKGIIK_11490 at 2466.491 kb on - strand, within OKGIIK_11490 at 2466.491 kb on - strand, within OKGIIK_11490 at 2466.491 kb on - strand, within OKGIIK_11490 at 2466.491 kb on - strand, within OKGIIK_11490 at 2466.568 kb on + strand, within OKGIIK_11490 at 2466.568 kb on + strand, within OKGIIK_11490 at 2466.568 kb on + strand, within OKGIIK_11490 at 2466.569 kb on - strand, within OKGIIK_11490 at 2467.181 kb on + strand, within OKGIIK_11495 at 2467.181 kb on + strand, within OKGIIK_11495 at 2467.181 kb on + strand, within OKGIIK_11495 at 2467.181 kb on + strand, within OKGIIK_11495 at 2467.181 kb on + strand, within OKGIIK_11495 at 2467.181 kb on + strand, within OKGIIK_11495 at 2467.181 kb on + strand, within OKGIIK_11495 at 2467.181 kb on + strand, within OKGIIK_11495 at 2467.181 kb on + strand, within OKGIIK_11495 at 2467.181 kb on + strand, within OKGIIK_11495 at 2467.182 kb on - strand, within OKGIIK_11495 at 2467.182 kb on - strand, within OKGIIK_11495 at 2467.182 kb on - strand, within OKGIIK_11495 at 2467.182 kb on - strand, within OKGIIK_11495 at 2467.182 kb on - strand, within OKGIIK_11495 at 2467.277 kb on - strand, within OKGIIK_11495 at 2467.277 kb on - strand, within OKGIIK_11495 at 2467.277 kb on - strand, within OKGIIK_11495 at 2467.559 kb on + strand, within OKGIIK_11495 at 2467.559 kb on + strand, within OKGIIK_11495 at 2467.559 kb on + strand, within OKGIIK_11495 at 2467.560 kb on - strand, within OKGIIK_11495 at 2467.560 kb on - strand, within OKGIIK_11495 at 2467.560 kb on - strand, within OKGIIK_11495 at 2467.560 kb on - strand, within OKGIIK_11495 at 2467.560 kb on - strand, within OKGIIK_11495 at 2467.565 kb on + strand, within OKGIIK_11495 at 2467.565 kb on + strand, within OKGIIK_11495 at 2467.565 kb on + strand, within OKGIIK_11495 at 2467.565 kb on + strand, within OKGIIK_11495 at 2467.565 kb on + strand, within OKGIIK_11495 at 2467.565 kb on + strand, within OKGIIK_11495 at 2467.566 kb on - strand, within OKGIIK_11495 at 2467.566 kb on - strand, within OKGIIK_11495 at 2467.566 kb on - strand, within OKGIIK_11495 at 2467.566 kb on - strand, within OKGIIK_11495 at 2467.566 kb on - strand, within OKGIIK_11495 at 2467.566 kb on - strand, within OKGIIK_11495 at 2467.566 kb on - strand, within OKGIIK_11495 at 2467.566 kb on - strand, within OKGIIK_11495 at 2467.566 kb on - strand, within OKGIIK_11495 at 2467.566 kb on - strand, within OKGIIK_11495 at 2467.566 kb on - strand, within OKGIIK_11495 at 2467.566 kb on - strand, within OKGIIK_11495 at 2467.791 kb on + strand at 2467.791 kb on + strand at 2467.791 kb on + strand at 2467.791 kb on + strand at 2467.791 kb on + strand at 2467.791 kb on + strand at 2467.791 kb on + strand at 2467.791 kb on + strand at 2467.791 kb on + strand at 2467.791 kb on + strand at 2467.792 kb on - strand at 2467.792 kb on - strand at 2467.792 kb on - strand at 2467.792 kb on - strand at 2467.792 kb on - strand at 2467.982 kb on + strand, within OKGIIK_11500 at 2467.982 kb on + strand, within OKGIIK_11500 at 2467.982 kb on + strand, within OKGIIK_11500 at 2467.982 kb on + strand, within OKGIIK_11500 at 2467.983 kb on - strand, within OKGIIK_11500 at 2467.983 kb on - strand, within OKGIIK_11500 at 2467.983 kb on - strand, within OKGIIK_11500 at 2467.983 kb on - strand, within OKGIIK_11500 at 2467.983 kb on - strand, within OKGIIK_11500 at 2467.983 kb on - strand, within OKGIIK_11500 at 2467.983 kb on - strand, within OKGIIK_11500 at 2468.139 kb on + strand, within OKGIIK_11500 at 2468.139 kb on + strand, within OKGIIK_11500 at 2468.140 kb on - strand, within OKGIIK_11500 at 2468.140 kb on - strand, within OKGIIK_11500 at 2468.140 kb on - strand, within OKGIIK_11500
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Cadmium chloride 128 uM remove 2,465,971 + -1.0 2,465,971 + -0.2 2,465,971 + +0.8 2,465,971 + -1.7 2,465,971 + -0.2 2,465,971 + -1.4 2,465,971 + -1.2 2,465,971 + -0.2 2,465,972 - +0.1 2,465,972 - -0.9 2,465,972 - -1.3 2,465,972 - -0.4 2,465,972 - -0.4 2,465,972 - -0.2 2,465,972 - -2.6 2,465,972 - -0.4 2,465,972 - +0.3 2,466,163 + OKGIIK_11490 0.29 -1.0 2,466,163 + OKGIIK_11490 0.29 -1.4 2,466,163 + OKGIIK_11490 0.29 -0.3 2,466,163 + OKGIIK_11490 0.29 -0.0 2,466,163 + OKGIIK_11490 0.29 +0.3 2,466,163 + OKGIIK_11490 0.29 +0.1 2,466,163 + OKGIIK_11490 0.29 -0.5 2,466,163 + OKGIIK_11490 0.29 +0.1 2,466,163 + OKGIIK_11490 0.29 +1.7 2,466,163 + OKGIIK_11490 0.29 +0.5 2,466,163 + OKGIIK_11490 0.29 -0.9 2,466,163 + OKGIIK_11490 0.29 -1.8 2,466,163 + OKGIIK_11490 0.29 -0.5 2,466,163 + OKGIIK_11490 0.29 +0.5 2,466,163 + OKGIIK_11490 0.29 -0.8 2,466,163 + OKGIIK_11490 0.29 +1.0 2,466,163 + OKGIIK_11490 0.29 -0.9 2,466,163 + OKGIIK_11490 0.29 +0.7 2,466,163 + OKGIIK_11490 0.29 -0.3 2,466,163 + OKGIIK_11490 0.29 +0.1 2,466,163 + OKGIIK_11490 0.29 +0.9 2,466,163 + OKGIIK_11490 0.29 -0.5 2,466,163 + OKGIIK_11490 0.29 -0.7 2,466,163 + OKGIIK_11490 0.29 +1.1 2,466,164 - OKGIIK_11490 0.29 -2.1 2,466,164 - OKGIIK_11490 0.29 +0.9 2,466,164 - OKGIIK_11490 0.29 -0.9 2,466,164 - OKGIIK_11490 0.29 -1.3 2,466,164 - OKGIIK_11490 0.29 +0.7 2,466,164 - OKGIIK_11490 0.29 -1.0 2,466,164 - OKGIIK_11490 0.29 +0.1 2,466,164 - OKGIIK_11490 0.29 +0.7 2,466,164 - OKGIIK_11490 0.29 -1.0 2,466,164 - OKGIIK_11490 0.29 -0.6 2,466,164 - OKGIIK_11490 0.29 +0.9 2,466,164 - OKGIIK_11490 0.29 -0.5 2,466,164 - OKGIIK_11490 0.29 +0.6 2,466,164 - OKGIIK_11490 0.29 -2.0 2,466,164 - OKGIIK_11490 0.29 -0.3 2,466,164 - OKGIIK_11490 0.29 +1.1 2,466,164 - OKGIIK_11490 0.29 +1.4 2,466,164 - OKGIIK_11490 0.29 -1.5 2,466,164 - OKGIIK_11490 0.29 -1.4 2,466,164 - OKGIIK_11490 0.29 +0.0 2,466,164 - OKGIIK_11490 0.29 -1.5 2,466,164 - OKGIIK_11490 0.29 -0.7 2,466,164 - OKGIIK_11490 0.29 +0.1 2,466,164 - OKGIIK_11490 0.29 -1.0 2,466,164 - OKGIIK_11490 0.29 +0.9 2,466,164 - OKGIIK_11490 0.29 -0.6 2,466,325 + OKGIIK_11490 0.47 -1.3 2,466,325 + OKGIIK_11490 0.47 -1.2 2,466,326 - OKGIIK_11490 0.47 -0.0 2,466,326 - OKGIIK_11490 0.47 -0.2 2,466,326 - OKGIIK_11490 0.47 +1.5 2,466,326 - OKGIIK_11490 0.47 -1.0 2,466,326 - OKGIIK_11490 0.47 -0.7 2,466,490 + OKGIIK_11490 0.65 -0.2 2,466,490 + OKGIIK_11490 0.65 -1.7 2,466,490 + OKGIIK_11490 0.65 -0.9 2,466,490 + OKGIIK_11490 0.65 -0.3 2,466,490 + OKGIIK_11490 0.65 -1.0 2,466,490 + OKGIIK_11490 0.65 -1.0 2,466,490 + OKGIIK_11490 0.65 -1.5 2,466,490 + OKGIIK_11490 0.65 +0.5 2,466,490 + OKGIIK_11490 0.65 -1.0 2,466,490 + OKGIIK_11490 0.65 -0.6 2,466,490 + OKGIIK_11490 0.65 -1.2 2,466,490 + OKGIIK_11490 0.65 +0.4 2,466,490 + OKGIIK_11490 0.65 +0.3 2,466,490 + OKGIIK_11490 0.65 -1.4 2,466,490 + OKGIIK_11490 0.65 -0.5 2,466,490 + OKGIIK_11490 0.65 +1.3 2,466,490 + OKGIIK_11490 0.65 +0.8 2,466,490 + OKGIIK_11490 0.65 -1.8 2,466,490 + OKGIIK_11490 0.65 -1.5 2,466,490 + OKGIIK_11490 0.65 -0.7 2,466,490 + OKGIIK_11490 0.65 +1.6 2,466,490 + OKGIIK_11490 0.65 +2.5 2,466,490 + OKGIIK_11490 0.65 +0.0 2,466,490 + OKGIIK_11490 0.65 -1.2 2,466,490 + OKGIIK_11490 0.65 +0.1 2,466,490 + OKGIIK_11490 0.65 -0.0 2,466,490 + OKGIIK_11490 0.65 +1.1 2,466,490 + OKGIIK_11490 0.65 -1.0 2,466,490 + OKGIIK_11490 0.65 -0.7 2,466,491 - OKGIIK_11490 0.65 -1.0 2,466,491 - OKGIIK_11490 0.65 +0.9 2,466,491 - OKGIIK_11490 0.65 +0.8 2,466,491 - OKGIIK_11490 0.65 -0.2 2,466,491 - OKGIIK_11490 0.65 -1.1 2,466,491 - OKGIIK_11490 0.65 -0.8 2,466,491 - OKGIIK_11490 0.65 -1.6 2,466,491 - OKGIIK_11490 0.65 -0.2 2,466,491 - OKGIIK_11490 0.65 -0.5 2,466,491 - OKGIIK_11490 0.65 -1.6 2,466,491 - OKGIIK_11490 0.65 -1.2 2,466,491 - OKGIIK_11490 0.65 -0.6 2,466,491 - OKGIIK_11490 0.65 -1.0 2,466,491 - OKGIIK_11490 0.65 +2.1 2,466,568 + OKGIIK_11490 0.74 -1.2 2,466,568 + OKGIIK_11490 0.74 -0.2 2,466,568 + OKGIIK_11490 0.74 -0.3 2,466,569 - OKGIIK_11490 0.74 +2.7 2,467,181 + OKGIIK_11495 0.34 -0.9 2,467,181 + OKGIIK_11495 0.34 +1.1 2,467,181 + OKGIIK_11495 0.34 -0.7 2,467,181 + OKGIIK_11495 0.34 -1.1 2,467,181 + OKGIIK_11495 0.34 -0.0 2,467,181 + OKGIIK_11495 0.34 -1.3 2,467,181 + OKGIIK_11495 0.34 -0.9 2,467,181 + OKGIIK_11495 0.34 -0.0 2,467,181 + OKGIIK_11495 0.34 -0.9 2,467,181 + OKGIIK_11495 0.34 +0.1 2,467,182 - OKGIIK_11495 0.34 -0.5 2,467,182 - OKGIIK_11495 0.34 -0.7 2,467,182 - OKGIIK_11495 0.34 -0.7 2,467,182 - OKGIIK_11495 0.34 -1.6 2,467,182 - OKGIIK_11495 0.34 -1.3 2,467,277 - OKGIIK_11495 0.46 -1.6 2,467,277 - OKGIIK_11495 0.46 -1.3 2,467,277 - OKGIIK_11495 0.46 +1.4 2,467,559 + OKGIIK_11495 0.79 -0.9 2,467,559 + OKGIIK_11495 0.79 -0.2 2,467,559 + OKGIIK_11495 0.79 -0.2 2,467,560 - OKGIIK_11495 0.79 +0.8 2,467,560 - OKGIIK_11495 0.79 -0.2 2,467,560 - OKGIIK_11495 0.79 -0.2 2,467,560 - OKGIIK_11495 0.79 -0.5 2,467,560 - OKGIIK_11495 0.79 -1.9 2,467,565 + OKGIIK_11495 0.80 -1.3 2,467,565 + OKGIIK_11495 0.80 -1.7 2,467,565 + OKGIIK_11495 0.80 +0.1 2,467,565 + OKGIIK_11495 0.80 -0.5 2,467,565 + OKGIIK_11495 0.80 -0.2 2,467,565 + OKGIIK_11495 0.80 -1.7 2,467,566 - OKGIIK_11495 0.80 -0.2 2,467,566 - OKGIIK_11495 0.80 +0.1 2,467,566 - OKGIIK_11495 0.80 -2.4 2,467,566 - OKGIIK_11495 0.80 +1.8 2,467,566 - OKGIIK_11495 0.80 +1.0 2,467,566 - OKGIIK_11495 0.80 +0.3 2,467,566 - OKGIIK_11495 0.80 +0.2 2,467,566 - OKGIIK_11495 0.80 +1.1 2,467,566 - OKGIIK_11495 0.80 -1.8 2,467,566 - OKGIIK_11495 0.80 +0.6 2,467,566 - OKGIIK_11495 0.80 -0.2 2,467,566 - OKGIIK_11495 0.80 +1.0 2,467,791 + +0.0 2,467,791 + -0.9 2,467,791 + -0.3 2,467,791 + -0.0 2,467,791 + -1.4 2,467,791 + +0.5 2,467,791 + -0.0 2,467,791 + -1.6 2,467,791 + +0.1 2,467,791 + +0.1 2,467,792 - -2.2 2,467,792 - +0.5 2,467,792 - +1.1 2,467,792 - +0.5 2,467,792 - -0.3 2,467,982 + OKGIIK_11500 0.16 +1.5 2,467,982 + OKGIIK_11500 0.16 +0.4 2,467,982 + OKGIIK_11500 0.16 -0.5 2,467,982 + OKGIIK_11500 0.16 -1.3 2,467,983 - OKGIIK_11500 0.16 -0.3 2,467,983 - OKGIIK_11500 0.16 -0.2 2,467,983 - OKGIIK_11500 0.16 +0.3 2,467,983 - OKGIIK_11500 0.16 +1.4 2,467,983 - OKGIIK_11500 0.16 -1.5 2,467,983 - OKGIIK_11500 0.16 -1.3 2,467,983 - OKGIIK_11500 0.16 -0.8 2,468,139 + OKGIIK_11500 0.37 +0.3 2,468,139 + OKGIIK_11500 0.37 -1.0 2,468,140 - OKGIIK_11500 0.37 -1.6 2,468,140 - OKGIIK_11500 0.37 -0.5 2,468,140 - OKGIIK_11500 0.37 -0.5
Or see this region's nucleotide sequence