Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_05370

Experiment: R2A_PIPES with Cadmium chloride 128 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Cadmium chloride 128 uM
1,171,403	+		OKGIIK_05365	0.16	+0.4
1,171,404	-		OKGIIK_05365	0.16	+0.0
1,171,404	-		OKGIIK_05365	0.16	+0.5
1,171,404	-		OKGIIK_05365	0.16	-1.3
1,171,404	-		OKGIIK_05365	0.16	-1.1
1,171,404	-		OKGIIK_05365	0.16	+0.0
1,171,646	+		OKGIIK_05365	0.38	+1.0
1,171,647	-		OKGIIK_05365	0.38	+2.0
1,171,647	-		OKGIIK_05365	0.38	+0.4
1,171,647	-		OKGIIK_05365	0.38	+0.4
1,171,693	+		OKGIIK_05365	0.43	+1.0
1,171,693	+		OKGIIK_05365	0.43	-0.3
1,171,693	+		OKGIIK_05365	0.43	+0.9
1,171,693	+		OKGIIK_05365	0.43	+0.1
1,171,693	+		OKGIIK_05365	0.43	-0.5
1,171,694	-		OKGIIK_05365	0.43	-0.9
1,171,694	-		OKGIIK_05365	0.43	+1.0
1,171,694	-		OKGIIK_05365	0.43	+1.2
1,171,694	-		OKGIIK_05365	0.43	-1.3
1,171,694	-		OKGIIK_05365	0.43	-1.6
1,171,694	-		OKGIIK_05365	0.43	-0.3
1,171,714	+		OKGIIK_05365	0.45	-1.6
1,171,731	-		OKGIIK_05365	0.46	-0.8
1,171,731	-		OKGIIK_05365	0.46	+1.5
1,171,731	-		OKGIIK_05365	0.46	-0.0
1,171,991	+		OKGIIK_05365	0.71	+0.9
1,172,091	-		OKGIIK_05365	0.80	-1.4
1,172,263	+				-2.4
1,172,263	+				-0.7
1,172,264	-				+1.2
1,172,264	-				+0.0
1,172,336	+				+0.3
1,172,359	-				-1.0
1,172,361	+				+0.3
1,172,361	+				+1.3
1,172,361	+				+0.4
1,172,361	+				-0.1
1,172,384	-				-2.3
1,172,412	+				+0.3
1,172,412	+				-0.2
1,172,412	+				+1.2
1,172,413	-				+0.1
1,172,413	-				-1.5
1,172,413	-				-1.7
1,172,413	-				-0.1
1,172,413	-				+0.7
1,172,413	-				-1.5
1,172,514	+				-0.2
1,172,515	-				-0.3
1,172,515	-				-0.3
1,172,515	-				+0.7
1,172,515	-				-0.5
1,172,565	+		OKGIIK_05370	0.11	-0.7
1,172,566	-		OKGIIK_05370	0.11	-1.3
1,172,609	+		OKGIIK_05370	0.13	-0.5
1,172,610	-		OKGIIK_05370	0.13	+0.3
1,172,627	+		OKGIIK_05370	0.14	-0.4
1,172,627	+		OKGIIK_05370	0.14	+0.0
1,172,628	-		OKGIIK_05370	0.14	-1.4
1,172,684	-		OKGIIK_05370	0.16	+0.8
1,172,760	+		OKGIIK_05370	0.20	-0.8
1,172,811	+		OKGIIK_05370	0.22	+0.3
1,172,811	+		OKGIIK_05370	0.22	-0.3
1,172,815	-		OKGIIK_05370	0.22	+0.9
1,172,815	-		OKGIIK_05370	0.22	+0.7
1,172,838	+		OKGIIK_05370	0.23	-1.8
1,172,838	+		OKGIIK_05370	0.23	-1.1
1,172,838	+		OKGIIK_05370	0.23	+0.7
1,172,838	+		OKGIIK_05370	0.23	+0.0
1,172,838	+		OKGIIK_05370	0.23	-0.5
1,172,838	+		OKGIIK_05370	0.23	-1.5
1,172,839	-		OKGIIK_05370	0.23	+0.4
1,172,839	-		OKGIIK_05370	0.23	-0.1
1,172,839	-		OKGIIK_05370	0.23	-2.9
1,172,839	-		OKGIIK_05370	0.23	-0.6
1,172,871	+		OKGIIK_05370	0.25	-0.0
1,172,871	+		OKGIIK_05370	0.25	-0.6
1,172,871	+		OKGIIK_05370	0.25	-0.1
1,172,871	+		OKGIIK_05370	0.25	+0.7
1,172,871	+		OKGIIK_05370	0.25	+0.4
1,172,871	+		OKGIIK_05370	0.25	+1.0
1,172,872	-		OKGIIK_05370	0.25	+0.0
1,172,872	-		OKGIIK_05370	0.25	+0.2
1,172,872	-		OKGIIK_05370	0.25	-0.3
1,172,872	-		OKGIIK_05370	0.25	-0.6
1,172,872	-		OKGIIK_05370	0.25	-3.0
1,172,872	-		OKGIIK_05370	0.25	-1.0
1,172,872	-		OKGIIK_05370	0.25	-1.4
1,172,872	-		OKGIIK_05370	0.25	-0.8
1,172,872	-		OKGIIK_05370	0.25	-1.0
1,172,874	+		OKGIIK_05370	0.25	-2.7
1,172,874	+		OKGIIK_05370	0.25	-1.3
1,172,874	+		OKGIIK_05370	0.25	-0.3
1,172,874	+		OKGIIK_05370	0.25	+1.1
1,172,875	-		OKGIIK_05370	0.25	-0.3
1,172,875	-		OKGIIK_05370	0.25	-1.8
1,173,015	+		OKGIIK_05370	0.31	-0.6
1,173,015	+		OKGIIK_05370	0.31	-0.8
1,173,016	-		OKGIIK_05370	0.31	+0.0
1,173,016	-		OKGIIK_05370	0.31	-0.2
1,173,016	-		OKGIIK_05370	0.31	-0.6
1,173,064	-		OKGIIK_05370	0.33	+0.0
1,173,129	+		OKGIIK_05370	0.36	+0.8
1,173,129	+		OKGIIK_05370	0.36	+0.3
1,173,129	+		OKGIIK_05370	0.36	-0.8
1,173,130	-		OKGIIK_05370	0.36	-1.7
1,173,177	+		OKGIIK_05370	0.38	+1.1
1,173,177	+		OKGIIK_05370	0.38	-0.4
1,173,178	-		OKGIIK_05370	0.38	-1.6
1,173,178	-		OKGIIK_05370	0.38	-0.8
1,173,195	+		OKGIIK_05370	0.39	-0.3
1,173,195	+		OKGIIK_05370	0.39	-0.4
1,173,195	+		OKGIIK_05370	0.39	+1.8
1,173,196	-		OKGIIK_05370	0.39	-1.1
1,173,196	-		OKGIIK_05370	0.39	+1.7
1,173,196	-		OKGIIK_05370	0.39	-0.7
1,173,196	-		OKGIIK_05370	0.39	+0.0
1,173,196	-		OKGIIK_05370	0.39	-0.2
1,173,196	-		OKGIIK_05370	0.39	-1.4
1,173,228	+		OKGIIK_05370	0.40	-1.3
1,173,228	+		OKGIIK_05370	0.40	+0.7
1,173,228	+		OKGIIK_05370	0.40	+0.4
1,173,229	-		OKGIIK_05370	0.40	-0.8
1,173,229	-		OKGIIK_05370	0.40	-0.1
1,173,229	-		OKGIIK_05370	0.40	+1.2
1,173,231	+		OKGIIK_05370	0.40	-0.5
1,173,231	+		OKGIIK_05370	0.40	+0.1
1,173,231	+		OKGIIK_05370	0.40	+0.7
1,173,231	+		OKGIIK_05370	0.40	+0.7
1,173,231	+		OKGIIK_05370	0.40	-0.7
1,173,231	+		OKGIIK_05370	0.40	-1.8
1,173,231	+		OKGIIK_05370	0.40	-0.5
1,173,231	+		OKGIIK_05370	0.40	-0.7
1,173,231	+		OKGIIK_05370	0.40	-0.8
1,173,232	-		OKGIIK_05370	0.40	-0.3
1,173,399	+		OKGIIK_05370	0.48	-0.3
1,173,399	+		OKGIIK_05370	0.48	-0.3
1,173,399	+		OKGIIK_05370	0.48	+0.3
1,173,399	+		OKGIIK_05370	0.48	+0.4
1,173,399	+		OKGIIK_05370	0.48	-2.3
1,173,400	-		OKGIIK_05370	0.48	-1.1
1,173,492	+		OKGIIK_05370	0.52	-1.5
1,173,492	+		OKGIIK_05370	0.52	-0.7
1,173,492	+		OKGIIK_05370	0.52	+0.2
1,173,492	+		OKGIIK_05370	0.52	+1.3
1,173,493	-		OKGIIK_05370	0.52	-0.1
1,173,493	-		OKGIIK_05370	0.52	+0.3
1,173,493	-		OKGIIK_05370	0.52	-1.0
1,173,567	+		OKGIIK_05370	0.55	+0.6
1,173,567	+		OKGIIK_05370	0.55	+1.5
1,173,567	+		OKGIIK_05370	0.55	+0.1
1,173,568	-		OKGIIK_05370	0.55	+0.9
1,173,568	-		OKGIIK_05370	0.55	-0.6
1,173,568	-		OKGIIK_05370	0.55	-0.4
1,173,568	-		OKGIIK_05370	0.55	-1.4
1,173,568	-		OKGIIK_05370	0.55	-1.8
1,173,588	+		OKGIIK_05370	0.56	+0.6
1,173,588	+		OKGIIK_05370	0.56	+1.0
1,173,684	+		OKGIIK_05370	0.60	-1.2
1,173,684	+		OKGIIK_05370	0.60	-0.3
1,173,685	-		OKGIIK_05370	0.60	-1.1
1,173,685	-		OKGIIK_05370	0.60	+1.1
1,173,685	-		OKGIIK_05370	0.60	-2.0
1,173,685	-		OKGIIK_05370	0.60	+0.0
1,173,697	+		OKGIIK_05370	0.61	-1.5
1,173,720	+		OKGIIK_05370	0.62	-0.8
1,173,721	-		OKGIIK_05370	0.62	+0.2
1,173,721	-		OKGIIK_05370	0.62	+1.6
1,173,721	-		OKGIIK_05370	0.62	-0.7
1,173,726	+		OKGIIK_05370	0.62	+0.0
1,173,727	-		OKGIIK_05370	0.62	-1.0
1,173,727	-		OKGIIK_05370	0.62	+0.5
1,173,727	-		OKGIIK_05370	0.62	+0.7
1,173,730	+		OKGIIK_05370	0.62	-0.3
1,173,730	+		OKGIIK_05370	0.62	-0.3
1,173,731	-		OKGIIK_05370	0.62	-2.8
1,173,904	+		OKGIIK_05370	0.70	+0.2
1,173,904	+		OKGIIK_05370	0.70	-1.8
1,173,918	+		OKGIIK_05370	0.70	-0.8
1,173,918	+		OKGIIK_05370	0.70	+0.5
1,173,918	+		OKGIIK_05370	0.70	-0.7
1,173,918	+		OKGIIK_05370	0.70	-2.5
1,173,918	+		OKGIIK_05370	0.70	+0.2
1,173,918	+		OKGIIK_05370	0.70	+0.3
1,173,918	+		OKGIIK_05370	0.70	-1.1
1,173,918	+		OKGIIK_05370	0.70	-0.5
1,173,918	+		OKGIIK_05370	0.70	+1.2
1,173,918	+		OKGIIK_05370	0.70	+0.9
1,173,918	+		OKGIIK_05370	0.70	+0.9
1,173,918	+		OKGIIK_05370	0.70	-0.3
1,173,919	-		OKGIIK_05370	0.70	-0.7
1,173,919	-		OKGIIK_05370	0.70	-0.6
1,173,919	-		OKGIIK_05370	0.70	+0.0
1,173,919	-		OKGIIK_05370	0.70	+0.7
1,173,919	-		OKGIIK_05370	0.70	-0.5
1,173,919	-		OKGIIK_05370	0.70	-1.9
1,173,919	-		OKGIIK_05370	0.70	+0.0
1,173,919	-		OKGIIK_05370	0.70	+0.0
1,173,919	-		OKGIIK_05370	0.70	-0.5
1,174,025	+		OKGIIK_05370	0.75	-1.4
1,174,025	+		OKGIIK_05370	0.75	-1.5
1,174,026	-		OKGIIK_05370	0.75	+0.9
1,174,086	-		OKGIIK_05370	0.78	-0.2
1,174,086	-		OKGIIK_05370	0.78	-1.3
1,174,122	+		OKGIIK_05370	0.79	-1.8
1,174,122	+		OKGIIK_05370	0.79	+0.2
1,174,122	+		OKGIIK_05370	0.79	-0.8
1,174,123	-		OKGIIK_05370	0.79	-1.3
1,174,123	-		OKGIIK_05370	0.79	+0.0
1,174,131	+		OKGIIK_05370	0.79	+1.7
1,174,131	+		OKGIIK_05370	0.79	+0.0
1,174,131	+		OKGIIK_05370	0.79	+0.3
1,174,131	+		OKGIIK_05370	0.79	-1.2
1,174,132	-		OKGIIK_05370	0.80	-0.3
1,174,263	+		OKGIIK_05370	0.85	+1.1
1,174,351	+		OKGIIK_05370	0.89	+2.3
1,174,351	+		OKGIIK_05370	0.89	+0.6
1,174,352	-		OKGIIK_05370	0.89	-1.4
1,174,453	+				-0.1
1,174,454	-				+0.2
1,174,630	+				-2.6
1,174,630	+				+0.0
1,174,630	+				+1.9
1,174,631	-				-0.6
1,174,631	-				-0.5
1,174,760	+		OKGIIK_05375	0.27	-0.2
1,175,016	+		OKGIIK_05375	0.75	-0.8
1,175,016	+		OKGIIK_05375	0.75	-0.2
1,175,016	+		OKGIIK_05375	0.75	-1.0
1,175,016	+		OKGIIK_05375	0.75	+0.5
1,175,016	+		OKGIIK_05375	0.75	-1.5
1,175,016	+		OKGIIK_05375	0.75	+0.8
1,175,024	+		OKGIIK_05375	0.76	-0.6
1,175,024	+		OKGIIK_05375	0.76	-1.6
1,175,024	+		OKGIIK_05375	0.76	-0.7
1,175,024	+		OKGIIK_05375	0.76	-1.6
1,175,024	+		OKGIIK_05375	0.76	-2.6
1,175,024	+		OKGIIK_05375	0.76	+0.1
1,175,025	-		OKGIIK_05375	0.76	+1.3
1,175,109	+				-0.8
1,175,110	-				-0.1
1,175,110	-				-1.8
1,175,307	+				-0.7
1,175,308	-				+0.4
1,175,308	-				+0.5
1,175,308	-				+2.5
1,175,377	-	modA	OKGIIK_05380	0.18	+0.0
1,175,377	-	modA	OKGIIK_05380	0.18	+0.9
1,175,458	-	modA	OKGIIK_05380	0.27	-0.7