Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_05225

Experiment: R2A_PIPES with Cadmium chloride 128 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Cadmium chloride 128 uM
1,133,393	+		OKGIIK_05220	0.57	+0.1
1,133,560	+		OKGIIK_05220	0.64	-1.0
1,133,768	+		OKGIIK_05220	0.74	-0.5
1,133,768	+		OKGIIK_05220	0.74	+0.3
1,133,768	+		OKGIIK_05220	0.74	-0.8
1,133,768	+		OKGIIK_05220	0.74	-0.7
1,133,768	+		OKGIIK_05220	0.74	-0.4
1,133,768	+		OKGIIK_05220	0.74	+2.0
1,133,768	+		OKGIIK_05220	0.74	+1.2
1,133,768	+		OKGIIK_05220	0.74	-0.3
1,133,768	+		OKGIIK_05220	0.74	-0.0
1,133,769	-		OKGIIK_05220	0.74	+0.3
1,133,769	-		OKGIIK_05220	0.74	-0.3
1,133,769	-		OKGIIK_05220	0.74	+1.0
1,133,769	-		OKGIIK_05220	0.74	-0.3
1,133,769	-		OKGIIK_05220	0.74	+0.1
1,133,769	-		OKGIIK_05220	0.74	+0.6
1,133,793	+		OKGIIK_05220	0.75	+0.3
1,133,794	-		OKGIIK_05220	0.75	+0.6
1,133,997	-		OKGIIK_05220	0.84	+1.1
1,133,997	-		OKGIIK_05220	0.84	+0.1
1,133,997	-		OKGIIK_05220	0.84	+0.3
1,134,125	+				+2.0
1,134,125	+				-0.9
1,134,125	+				-1.6
1,134,183	+				+0.3
1,134,184	-				+2.3
1,134,184	-				-0.6
1,134,184	-				+0.1
1,134,365	+				-1.3
1,134,366	-				-0.1
1,134,672	-		OKGIIK_05225	0.23	-2.0
1,135,012	+		OKGIIK_05225	0.47	+1.3
1,135,012	+		OKGIIK_05225	0.47	-0.0
1,135,013	-		OKGIIK_05225	0.47	-3.1
1,135,013	-		OKGIIK_05225	0.47	+0.3
1,135,013	-		OKGIIK_05225	0.47	-1.6
1,135,045	+		OKGIIK_05225	0.49	-1.3
1,135,069	+		OKGIIK_05225	0.51	+0.7
1,135,070	-		OKGIIK_05225	0.51	-1.4
1,135,070	-		OKGIIK_05225	0.51	-0.5
1,135,087	+		OKGIIK_05225	0.52	-0.9
1,135,088	-		OKGIIK_05225	0.52	-2.1
1,135,088	-		OKGIIK_05225	0.52	-1.1
1,135,088	-		OKGIIK_05225	0.52	-0.3
1,135,088	-		OKGIIK_05225	0.52	-0.1
1,135,088	-		OKGIIK_05225	0.52	-0.5
1,135,160	+		OKGIIK_05225	0.57	-1.0
1,135,160	+		OKGIIK_05225	0.57	-0.8
1,135,160	+		OKGIIK_05225	0.57	-0.5
1,135,160	+		OKGIIK_05225	0.57	-1.0
1,135,160	+		OKGIIK_05225	0.57	-0.7
1,135,161	-		OKGIIK_05225	0.58	-0.9
1,135,193	+		OKGIIK_05225	0.60	-0.5
1,135,193	+		OKGIIK_05225	0.60	-1.0
1,135,194	-		OKGIIK_05225	0.60	+0.1
1,135,213	-		OKGIIK_05225	0.61	-2.1
1,135,213	-		OKGIIK_05225	0.61	-0.5
1,135,281	-		OKGIIK_05225	0.66	-1.7
1,135,336	-		OKGIIK_05225	0.70	+0.1
1,135,336	-		OKGIIK_05225	0.70	-1.1
1,135,359	+		OKGIIK_05225	0.71	+0.3
1,135,360	-		OKGIIK_05225	0.72	-0.7
1,135,360	-		OKGIIK_05225	0.72	-1.0
1,135,485	+		OKGIIK_05225	0.80	+0.5
1,135,486	-		OKGIIK_05225	0.80	-1.8
1,135,510	+		OKGIIK_05225	0.82	-1.7
1,135,511	-		OKGIIK_05225	0.82	+1.9
1,135,520	-		OKGIIK_05225	0.83	-0.0
1,135,525	+		OKGIIK_05225	0.83	-1.4
1,135,525	+		OKGIIK_05225	0.83	-1.1
1,135,526	-		OKGIIK_05225	0.83	-1.2
1,135,527	+		OKGIIK_05225	0.83	-0.7
1,135,528	-		OKGIIK_05225	0.83	+0.7
1,135,591	+		OKGIIK_05225	0.88	+1.1
1,135,591	+		OKGIIK_05225	0.88	-0.7
1,135,591	+		OKGIIK_05225	0.88	-1.1
1,135,591	+		OKGIIK_05225	0.88	-0.3
1,135,592	-		OKGIIK_05225	0.88	+1.3
1,135,711	+				+0.5
1,135,711	+				-0.9
1,135,712	-				+0.7
1,135,712	-				-2.7
1,135,712	-				-1.1
1,135,763	-				-0.0
1,135,821	+				-0.0
1,135,821	+				+0.4
1,135,821	+				+0.3
1,135,821	+				-0.7
1,135,821	+				-0.0
1,135,821	+				+0.1
1,135,821	+				+0.3
1,135,821	+				+0.3
1,135,821	+				-0.3
1,135,821	+				-0.9
1,135,821	+				-0.5
1,135,821	+				-0.2
1,135,821	+				+0.1
1,135,822	-				-1.0
1,135,822	-				+2.3
1,135,822	-				+0.3
1,135,822	-				-0.1
1,135,822	-				+1.0
1,135,822	-				+0.6
1,135,822	-				+1.5
1,135,822	-				+0.7
1,135,829	+				-0.3
1,135,829	+				+2.9
1,135,830	-				+0.1
1,135,834	-				-0.0
1,135,834	-				-1.0
1,135,897	-				+1.5
1,135,964	+				-0.0
1,136,038	+				-1.9
1,136,038	+				-1.0
1,136,039	-				-0.3
1,136,039	-				-2.8
1,136,039	-				-1.0
1,136,065	-				-0.4
1,136,091	+				+1.9
1,136,121	+				-0.2
1,136,121	+				-1.0
1,136,121	+				-2.0
1,136,121	+				+0.6
1,136,122	-				+0.5
1,136,122	-				-0.9
1,136,155	-				+0.1
1,136,167	+				-2.4
1,136,205	+				+1.1
1,136,206	-				-0.6
1,136,222	-				-0.3
1,136,252	+				+0.6
1,136,252	+				-0.5
1,136,252	+				-0.4
1,136,252	+				+0.3
1,136,252	+				-0.4
1,136,253	-				-1.3
1,136,253	-				-2.1
1,136,253	-				-0.9
1,136,253	-				-1.0
1,136,294	+				-0.3
1,136,360	+		OKGIIK_05230	0.16	+0.7
1,136,360	+		OKGIIK_05230	0.16	-1.8
1,136,360	+		OKGIIK_05230	0.16	-0.3
1,136,360	+		OKGIIK_05230	0.16	-1.7
1,136,360	+		OKGIIK_05230	0.16	-0.3
1,136,361	-		OKGIIK_05230	0.16	-0.8
1,136,381	+		OKGIIK_05230	0.21	-1.0
1,136,381	+		OKGIIK_05230	0.21	-2.4
1,136,381	+		OKGIIK_05230	0.21	+0.4
1,136,382	-		OKGIIK_05230	0.21	+0.5
1,136,423	+		OKGIIK_05230	0.32	-2.5
1,136,423	+		OKGIIK_05230	0.32	-2.4
1,136,424	-		OKGIIK_05230	0.32	-0.7
1,136,424	-		OKGIIK_05230	0.32	-0.2
1,136,424	-		OKGIIK_05230	0.32	-2.4
1,136,424	-		OKGIIK_05230	0.32	-0.5
1,136,424	-		OKGIIK_05230	0.32	+1.0
1,136,424	-		OKGIIK_05230	0.32	-2.2
1,136,424	-		OKGIIK_05230	0.32	-0.5
1,136,424	-		OKGIIK_05230	0.32	-0.7
1,136,426	+		OKGIIK_05230	0.32	+1.5
1,136,427	-		OKGIIK_05230	0.33	-0.9
1,136,442	-		OKGIIK_05230	0.36	-0.9
1,136,442	-		OKGIIK_05230	0.36	-0.5
1,136,468	+		OKGIIK_05230	0.43	+0.3
1,136,468	+		OKGIIK_05230	0.43	+0.7
1,136,468	+		OKGIIK_05230	0.43	-0.9
1,136,469	-		OKGIIK_05230	0.43	-0.3
1,136,477	+		OKGIIK_05230	0.45	-1.0
1,136,478	-		OKGIIK_05230	0.45	-0.4
1,136,478	-		OKGIIK_05230	0.45	-0.1
1,136,636	+		OKGIIK_05230	0.85	-0.7
1,136,636	+		OKGIIK_05230	0.85	+1.3
1,136,636	+		OKGIIK_05230	0.85	-0.5
1,136,636	+		OKGIIK_05230	0.85	-0.7
1,136,637	-		OKGIIK_05230	0.85	-0.3
1,136,637	-		OKGIIK_05230	0.85	-0.5
1,136,637	-		OKGIIK_05230	0.85	+0.1
1,136,637	-		OKGIIK_05230	0.85	-0.5
1,136,678	+				-1.7
1,136,678	+				-0.0
1,136,678	+				-1.0
1,136,679	-				-0.1
1,136,679	-				+0.7
1,136,679	-				+1.1
1,136,704	+				-1.7
1,136,704	+				+1.0
1,136,705	-				+0.2
1,136,712	+				-1.0
1,136,735	+				-1.1
1,136,735	+				+0.4
1,136,735	+				+0.4
1,136,735	+				-1.9
1,136,736	-				-0.2
1,136,757	+				-0.5
1,136,757	+				-2.9
1,136,757	+				+0.3
1,136,757	+				-1.1
1,136,757	+				-1.3
1,136,757	+				-1.1
1,136,757	+				+0.1
1,136,757	+				+1.1
1,136,757	+				-1.2
1,136,757	+				+1.0
1,136,758	-				-1.4
1,136,758	-				-0.7
1,136,758	-				-0.4
1,136,758	-				-2.1
1,136,758	-				-0.0
1,136,759	+				+0.7
1,136,759	+				-0.4
1,136,760	-				-1.0
1,136,760	-				+0.1
1,136,760	-				-1.0
1,136,760	-				+0.3