Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_05185

Experiment: R2A_PIPES with Cadmium chloride 128 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Cadmium chloride 128 uM
1,122,464	+				-0.8
1,122,464	+				-2.3
1,122,465	-				-2.1
1,122,465	-				-0.3
1,122,465	-				-0.5
1,122,564	+				+1.2
1,122,564	+				-0.2
1,122,565	-				-1.5
1,122,565	-				-1.3
1,122,625	+		OKGIIK_05180	0.17	+0.1
1,122,625	+		OKGIIK_05180	0.17	+1.3
1,122,625	+		OKGIIK_05180	0.17	-1.6
1,122,625	+		OKGIIK_05180	0.17	-1.7
1,122,625	+		OKGIIK_05180	0.17	-0.3
1,122,625	+		OKGIIK_05180	0.17	-0.9
1,122,625	+		OKGIIK_05180	0.17	-0.4
1,122,625	+		OKGIIK_05180	0.17	-0.7
1,122,625	+		OKGIIK_05180	0.17	-1.4
1,122,626	-		OKGIIK_05180	0.17	+0.7
1,122,626	-		OKGIIK_05180	0.17	+0.2
1,122,626	-		OKGIIK_05180	0.17	+1.4
1,122,626	-		OKGIIK_05180	0.17	+0.3
1,122,626	-		OKGIIK_05180	0.17	+1.3
1,122,630	+		OKGIIK_05180	0.17	-0.0
1,122,630	+		OKGIIK_05180	0.17	+0.3
1,122,630	+		OKGIIK_05180	0.17	-0.3
1,122,630	+		OKGIIK_05180	0.17	+0.5
1,122,630	+		OKGIIK_05180	0.17	-0.0
1,122,630	+		OKGIIK_05180	0.17	-0.9
1,122,650	+		OKGIIK_05180	0.19	-1.9
1,122,650	+		OKGIIK_05180	0.19	+0.3
1,122,650	+		OKGIIK_05180	0.19	-0.4
1,122,650	+		OKGIIK_05180	0.19	-1.0
1,122,650	+		OKGIIK_05180	0.19	-0.0
1,122,650	+		OKGIIK_05180	0.19	-0.3
1,122,650	+		OKGIIK_05180	0.19	+0.6
1,122,651	-		OKGIIK_05180	0.20	+0.3
1,122,651	-		OKGIIK_05180	0.20	-1.1
1,122,790	+		OKGIIK_05180	0.35	-0.3
1,122,791	-		OKGIIK_05180	0.35	+2.6
1,122,791	-		OKGIIK_05180	0.35	-0.9
1,122,791	-		OKGIIK_05180	0.35	-0.7
1,122,791	-		OKGIIK_05180	0.35	+0.3
1,122,791	-		OKGIIK_05180	0.35	+0.2
1,122,854	+		OKGIIK_05180	0.43	-0.3
1,122,855	+		OKGIIK_05180	0.43	-1.5
1,122,909	+		OKGIIK_05180	0.49	-0.0
1,122,909	+		OKGIIK_05180	0.49	-1.4
1,122,909	+		OKGIIK_05180	0.49	-2.4
1,122,909	+		OKGIIK_05180	0.49	-0.5
1,122,909	+		OKGIIK_05180	0.49	-1.5
1,122,909	+		OKGIIK_05180	0.49	-0.2
1,122,909	+		OKGIIK_05180	0.49	-0.0
1,122,909	+		OKGIIK_05180	0.49	+0.4
1,122,909	+		OKGIIK_05180	0.49	-1.5
1,122,909	+		OKGIIK_05180	0.49	-0.3
1,122,909	+		OKGIIK_05180	0.49	-0.1
1,122,909	+		OKGIIK_05180	0.49	-1.0
1,122,909	+		OKGIIK_05180	0.49	-2.5
1,122,910	-		OKGIIK_05180	0.49	+0.1
1,122,910	-		OKGIIK_05180	0.49	+1.1
1,122,910	-		OKGIIK_05180	0.49	-0.3
1,122,910	-		OKGIIK_05180	0.49	+0.1
1,122,910	-		OKGIIK_05180	0.49	+0.4
1,122,910	-		OKGIIK_05180	0.49	-0.7
1,122,910	-		OKGIIK_05180	0.49	+1.3
1,122,910	-		OKGIIK_05180	0.49	-1.8
1,122,910	-		OKGIIK_05180	0.49	-0.0
1,123,009	+		OKGIIK_05180	0.60	-1.0
1,123,009	+		OKGIIK_05180	0.60	-0.3
1,123,010	-		OKGIIK_05180	0.60	-0.0
1,123,010	-		OKGIIK_05180	0.60	-1.4
1,123,010	-		OKGIIK_05180	0.60	-1.0
1,123,066	+		OKGIIK_05180	0.67	-0.7
1,123,066	+		OKGIIK_05180	0.67	+2.2
1,123,066	+		OKGIIK_05180	0.67	-0.1
1,123,066	+		OKGIIK_05180	0.67	-1.4
1,123,066	+		OKGIIK_05180	0.67	-0.0
1,123,066	+		OKGIIK_05180	0.67	-0.9
1,123,066	+		OKGIIK_05180	0.67	-0.8
1,123,066	+		OKGIIK_05180	0.67	-1.3
1,123,067	-		OKGIIK_05180	0.67	+0.6
1,123,067	-		OKGIIK_05180	0.67	-0.3
1,123,067	-		OKGIIK_05180	0.67	+2.7
1,123,067	-		OKGIIK_05180	0.67	-1.1
1,123,067	-		OKGIIK_05180	0.67	+0.3
1,123,067	-		OKGIIK_05180	0.67	+0.7
1,123,067	-		OKGIIK_05180	0.67	-0.0
1,123,190	+		OKGIIK_05180	0.81	-0.8
1,123,190	+		OKGIIK_05180	0.81	-1.5
1,123,190	+		OKGIIK_05180	0.81	+0.3
1,123,190	+		OKGIIK_05180	0.81	+1.5
1,123,190	+		OKGIIK_05180	0.81	+2.1
1,123,191	-		OKGIIK_05180	0.81	-0.3
1,123,191	-		OKGIIK_05180	0.81	+1.3
1,123,191	-		OKGIIK_05180	0.81	+1.2
1,123,208	+		OKGIIK_05180	0.83	+0.6
1,123,208	+		OKGIIK_05180	0.83	-0.9
1,123,208	+		OKGIIK_05180	0.83	+1.0
1,123,208	+		OKGIIK_05180	0.83	-0.0
1,123,209	-		OKGIIK_05180	0.83	+0.1
1,123,209	-		OKGIIK_05180	0.83	+1.1
1,123,209	-		OKGIIK_05180	0.83	+0.5
1,123,209	-		OKGIIK_05180	0.83	+0.4
1,123,209	-		OKGIIK_05180	0.83	-0.0
1,123,209	-		OKGIIK_05180	0.83	-0.5
1,123,209	-		OKGIIK_05180	0.83	-0.3
1,123,229	+		OKGIIK_05180	0.85	+1.0
1,123,229	+		OKGIIK_05180	0.85	-0.1
1,123,229	+		OKGIIK_05180	0.85	-1.5
1,123,229	+		OKGIIK_05180	0.85	-0.0
1,123,230	-		OKGIIK_05180	0.85	+0.3
1,123,230	-		OKGIIK_05180	0.85	-0.2
1,123,230	-		OKGIIK_05180	0.85	-0.0
1,123,230	-		OKGIIK_05180	0.85	-0.7
1,123,230	-		OKGIIK_05180	0.85	-1.4
1,123,372	+				-1.0
1,123,372	+				-0.7
1,123,372	+				+0.7
1,123,373	-				+1.6
1,123,380	+				-1.1
1,123,380	+				+0.3
1,123,380	+				-1.0
1,123,381	-				+0.3
1,123,429	+				-0.5
1,123,430	-				+0.7
1,123,445	+				-1.7
1,123,445	+				-1.3
1,123,497	+				-0.7
1,123,497	+				+0.3
1,123,497	+				-1.3
1,123,497	+				-0.3
1,123,497	+				-0.9
1,123,497	+				-0.5
1,123,498	-				+0.1
1,123,498	-				-0.9
1,123,498	-				+0.2
1,123,498	-				-0.1
1,123,498	-				-1.7
1,123,498	-				-1.0
1,123,536	+		OKGIIK_05185	0.13	-1.4
1,123,537	-		OKGIIK_05185	0.13	+0.1
1,123,537	-		OKGIIK_05185	0.13	-0.5
1,123,543	+		OKGIIK_05185	0.14	+1.2
1,123,543	+		OKGIIK_05185	0.14	-1.1
1,123,561	+		OKGIIK_05185	0.16	+0.1
1,123,561	+		OKGIIK_05185	0.16	-0.1
1,123,561	+		OKGIIK_05185	0.16	-0.0
1,123,561	+		OKGIIK_05185	0.16	+0.5
1,123,561	+		OKGIIK_05185	0.16	-0.6
1,123,561	+		OKGIIK_05185	0.16	-1.0
1,123,561	+		OKGIIK_05185	0.16	+1.1
1,123,561	+		OKGIIK_05185	0.16	-0.2
1,123,562	-		OKGIIK_05185	0.16	-0.0
1,123,562	-		OKGIIK_05185	0.16	+0.3
1,123,562	-		OKGIIK_05185	0.16	-1.6
1,123,562	-		OKGIIK_05185	0.16	-1.3
1,123,663	+		OKGIIK_05185	0.28	-0.2
1,123,663	+		OKGIIK_05185	0.28	-0.2
1,123,663	+		OKGIIK_05185	0.28	-0.0
1,123,663	+		OKGIIK_05185	0.28	+0.3
1,123,664	-		OKGIIK_05185	0.29	-1.1
1,123,664	-		OKGIIK_05185	0.29	+0.3
1,123,664	-		OKGIIK_05185	0.29	+0.7
1,123,664	-		OKGIIK_05185	0.29	+1.3
1,123,695	+		OKGIIK_05185	0.32	+0.4
1,123,695	+		OKGIIK_05185	0.32	+0.4
1,123,695	+		OKGIIK_05185	0.32	+0.8
1,123,695	+		OKGIIK_05185	0.32	-0.7
1,123,695	+		OKGIIK_05185	0.32	-1.4
1,123,695	+		OKGIIK_05185	0.32	-1.2
1,123,695	+		OKGIIK_05185	0.32	+0.3
1,123,695	+		OKGIIK_05185	0.32	-0.4
1,123,695	+		OKGIIK_05185	0.32	+1.3
1,123,696	-		OKGIIK_05185	0.32	-0.0
1,123,696	-		OKGIIK_05185	0.32	+0.3
1,123,696	-		OKGIIK_05185	0.32	-1.9
1,123,717	+		OKGIIK_05185	0.35	+0.1
1,123,717	+		OKGIIK_05185	0.35	+0.3
1,123,717	+		OKGIIK_05185	0.35	-0.0
1,123,717	+		OKGIIK_05185	0.35	-1.6
1,123,717	+		OKGIIK_05185	0.35	-0.3
1,123,718	-		OKGIIK_05185	0.35	+0.7
1,123,718	-		OKGIIK_05185	0.35	+0.3
1,123,718	-		OKGIIK_05185	0.35	-0.9
1,123,793	+		OKGIIK_05185	0.44	+1.0
1,123,793	+		OKGIIK_05185	0.44	-0.5
1,123,793	+		OKGIIK_05185	0.44	-0.9
1,123,793	+		OKGIIK_05185	0.44	-1.0
1,123,793	+		OKGIIK_05185	0.44	-1.7
1,123,793	+		OKGIIK_05185	0.44	-0.5
1,123,794	-		OKGIIK_05185	0.44	-0.5
1,123,794	-		OKGIIK_05185	0.44	-0.0
1,123,794	-		OKGIIK_05185	0.44	+1.6
1,123,794	-		OKGIIK_05185	0.44	+1.3
1,123,802	-		OKGIIK_05185	0.45	-2.6
1,123,803	+		OKGIIK_05185	0.45	-1.6
1,123,808	-		OKGIIK_05185	0.46	+0.5
1,123,845	+		OKGIIK_05185	0.51	-0.3
1,123,845	+		OKGIIK_05185	0.51	-0.0
1,123,879	+		OKGIIK_05185	0.55	-0.0
1,123,879	+		OKGIIK_05185	0.55	+0.7
1,123,880	-		OKGIIK_05185	0.55	+0.3
1,123,880	-		OKGIIK_05185	0.55	+2.1
1,123,880	-		OKGIIK_05185	0.55	-1.1
1,123,880	-		OKGIIK_05185	0.55	+1.6
1,123,880	-		OKGIIK_05185	0.55	+0.7
1,123,880	-		OKGIIK_05185	0.55	+1.3
1,123,955	+		OKGIIK_05185	0.64	+1.3
1,123,955	+		OKGIIK_05185	0.64	-0.8
1,123,955	+		OKGIIK_05185	0.64	-0.2
1,123,955	+		OKGIIK_05185	0.64	-0.1
1,123,955	+		OKGIIK_05185	0.64	-2.5
1,123,956	-		OKGIIK_05185	0.64	+0.4
1,123,956	-		OKGIIK_05185	0.64	-0.5
1,123,956	-		OKGIIK_05185	0.64	+1.5
1,123,956	-		OKGIIK_05185	0.64	-0.1
1,123,956	-		OKGIIK_05185	0.64	-0.7
1,124,022	+		OKGIIK_05185	0.72	+0.5
1,124,022	+		OKGIIK_05185	0.72	-0.5
1,124,022	+		OKGIIK_05185	0.72	+0.3
1,124,022	+		OKGIIK_05185	0.72	+0.3
1,124,022	+		OKGIIK_05185	0.72	-0.9
1,124,022	+		OKGIIK_05185	0.72	-0.4
1,124,022	+		OKGIIK_05185	0.72	+0.5
1,124,023	-		OKGIIK_05185	0.72	-0.3
1,124,023	-		OKGIIK_05185	0.72	-1.9
1,124,023	-		OKGIIK_05185	0.72	+0.6
1,124,023	-		OKGIIK_05185	0.72	+1.1
1,124,023	-		OKGIIK_05185	0.72	+1.1
1,124,023	-		OKGIIK_05185	0.72	-1.1
1,124,023	-		OKGIIK_05185	0.72	-0.6
1,124,036	+		OKGIIK_05185	0.74	-0.3
1,124,036	+		OKGIIK_05185	0.74	-0.8
1,124,036	+		OKGIIK_05185	0.74	-0.4
1,124,036	+		OKGIIK_05185	0.74	+1.3
1,124,036	+		OKGIIK_05185	0.74	-0.3
1,124,036	+		OKGIIK_05185	0.74	-0.1
1,124,036	+		OKGIIK_05185	0.74	-1.9
1,124,037	-		OKGIIK_05185	0.74	+1.6
1,124,037	-		OKGIIK_05185	0.74	+0.3
1,124,053	+		OKGIIK_05185	0.76	-0.7
1,124,054	-		OKGIIK_05185	0.76	+0.4
1,124,054	-		OKGIIK_05185	0.76	-1.1
1,124,054	-		OKGIIK_05185	0.76	-0.3
1,124,155	+		OKGIIK_05185	0.88	-0.1
1,124,155	+		OKGIIK_05185	0.88	+1.6
1,124,156	-		OKGIIK_05185	0.88	+0.4
1,124,285	-				-0.8
1,124,299	+				-2.0
1,124,299	+				-0.0
1,124,299	+				-1.2
1,124,299	+				-1.3
1,124,299	+				-0.5
1,124,299	+				+0.3
1,124,300	-				-0.5
1,124,300	-				-0.9
1,124,300	-				-2.1
1,124,300	-				+1.6
1,124,300	-				-0.5
1,124,300	-				+0.3
1,124,300	-				-0.5
1,124,300	-				+0.3
1,124,306	+				+0.7
1,124,307	-				-0.0
1,124,368	+				+0.5
1,124,369	-				-0.9
1,124,369	-				+0.7
1,124,369	-				+1.2
1,124,369	-				+0.5
1,124,369	-				+2.8
1,124,369	-				-0.6
1,124,369	-				-1.7
1,124,426	+				-1.3
1,124,426	+				+0.6
1,124,426	+				-0.3
1,124,426	+				-1.4
1,124,426	+				+1.3
1,124,426	+				-0.0
1,124,426	+				+0.1
1,124,427	-				-1.9
1,124,427	-				+0.4
1,124,427	-				-0.2
1,124,427	-				-1.0
1,124,427	-				-0.0
1,124,427	-				-0.6
1,124,427	-				+1.1
1,124,427	-				-0.8
1,124,427	-				-0.5
1,124,427	-				+1.3
1,124,427	-				-0.7
1,124,427	-				-1.3
1,124,427	-				-1.0
1,124,429	+				-0.5
1,124,430	-				-1.1
1,124,430	-				+0.9
1,124,433	-				+0.5
1,124,433	-				+1.3
1,124,458	+				+0.3
1,124,458	+				+0.9
1,124,459	-				+0.3
1,124,459	-				-1.3
1,124,466	+				+0.1
1,124,466	+				-0.7
1,124,466	+				+1.9
1,124,466	+				+1.7
1,124,466	+				+1.4
1,124,466	+				+1.3
1,124,466	+				-1.0
1,124,467	-				-1.0
1,124,467	-				-0.0
1,124,467	-				+2.0
1,124,467	-				-0.6
1,124,467	-				-0.1
1,124,467	-				+1.0
1,124,467	-				-1.0
1,124,628	-				-0.3
1,124,636	+				+2.0
1,124,636	+				-0.9
1,124,636	+				-1.0
1,124,636	+				+0.5
1,124,636	+				-0.5
1,124,636	+				+0.1
1,124,636	+				+1.2
1,124,636	+				+1.1
1,124,636	+				-0.9
1,124,636	+				-0.3
1,124,637	-				+1.8
1,124,637	-				-0.9
1,124,637	-				-1.3
1,124,637	-				-1.4
1,124,637	-				+1.2
1,124,763	-				-0.5
1,124,763	-				-1.1
1,124,763	-				-1.3
1,124,844	+				+0.4
1,124,844	+				-0.0
1,124,845	-				-0.1
1,124,845	-				-0.0
1,124,863	+				-0.0
1,124,863	+				-0.6
1,124,863	+				-1.4
1,124,863	+				-0.2
1,124,863	+				-0.0
1,124,863	+				-0.7
1,124,864	-				-1.0
1,124,864	-				+1.3
1,124,864	-				-1.4
1,124,876	-				+0.3
1,124,876	-				-0.3
1,124,922	-				+0.3
1,124,922	-				-0.3
1,124,935	-				+0.0
1,124,935	-				-0.4
1,124,935	-				-0.3
1,124,935	-				-0.7
1,124,935	-				+0.3
1,124,949	+				-0.1
1,124,974	-				+1.7
1,124,974	-				-0.7
1,124,974	-				-0.9
1,125,079	+				-1.9
1,125,079	+				+1.2
1,125,079	+				-0.3
1,125,079	+				+0.0
1,125,079	+				-1.7
1,125,079	+				-2.0
1,125,109	+				-1.9
1,125,109	+				-0.4
1,125,205	+				-0.3
1,125,205	+				-0.3
1,125,205	+				+1.0
1,125,206	-				-0.6
1,125,206	-				-1.9
1,125,206	-				-0.1
1,125,206	-				-0.7
1,125,206	-				+0.1
1,125,206	-				-0.0
1,125,206	-				+1.9
1,125,206	-				-0.3
1,125,206	-				-2.4
1,125,206	-				-0.3
1,125,208	+				-0.9
1,125,208	+				-1.3
1,125,208	+				+0.3
1,125,209	-				+0.7
1,125,209	-				+0.9