Experiment: R2A_PIPES with Cadmium chloride 128 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_03365 and OKGIIK_03370 are separated by 81 nucleotides OKGIIK_03370 and OKGIIK_03375 are separated by 48 nucleotides OKGIIK_03375 and OKGIIK_03380 are separated by 105 nucleotides OKGIIK_03380 and hflC are separated by 16 nucleotides
OKGIIK_03365: OKGIIK_03365 - Electron transporter, at 754,479 to 755,090
_03365
OKGIIK_03370: OKGIIK_03370 - DUF423 domain-containing protein, at 755,172 to 755,549
_03370
OKGIIK_03375: OKGIIK_03375 - hypothetical protein, at 755,598 to 756,008
_03375
OKGIIK_03380: OKGIIK_03380 - Arc family DNA binding domain-containing protein, at 756,114 to 756,308
_03380
OKGIIK_03385: hflC - SPFH domain / Band 7 family, at 756,325 to 757,191
hflC
Position (kb) 755
756
757 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 755.069 kb on - strand at 755.123 kb on + strand at 755.123 kb on + strand at 755.123 kb on + strand at 755.123 kb on + strand at 755.123 kb on + strand at 755.123 kb on + strand at 755.123 kb on + strand at 755.123 kb on + strand at 755.123 kb on + strand at 755.124 kb on - strand at 755.124 kb on - strand at 755.124 kb on - strand at 755.124 kb on - strand at 755.124 kb on - strand at 755.124 kb on - strand at 755.124 kb on - strand at 755.195 kb on + strand at 755.195 kb on + strand at 755.195 kb on + strand at 755.195 kb on + strand at 755.195 kb on + strand at 755.195 kb on + strand at 755.196 kb on - strand at 755.196 kb on - strand at 755.196 kb on - strand at 755.316 kb on + strand, within OKGIIK_03370 at 755.316 kb on + strand, within OKGIIK_03370 at 755.316 kb on + strand, within OKGIIK_03370 at 755.316 kb on + strand, within OKGIIK_03370 at 755.316 kb on + strand, within OKGIIK_03370 at 755.316 kb on + strand, within OKGIIK_03370 at 755.316 kb on + strand, within OKGIIK_03370 at 755.317 kb on - strand, within OKGIIK_03370 at 755.317 kb on - strand, within OKGIIK_03370 at 755.317 kb on - strand, within OKGIIK_03370 at 755.317 kb on - strand, within OKGIIK_03370 at 755.317 kb on - strand, within OKGIIK_03370 at 755.317 kb on - strand, within OKGIIK_03370 at 755.433 kb on + strand, within OKGIIK_03370 at 755.433 kb on + strand, within OKGIIK_03370 at 755.433 kb on + strand, within OKGIIK_03370 at 755.434 kb on - strand, within OKGIIK_03370 at 755.835 kb on + strand, within OKGIIK_03375 at 755.835 kb on + strand, within OKGIIK_03375 at 755.836 kb on - strand, within OKGIIK_03375 at 755.836 kb on - strand, within OKGIIK_03375 at 755.836 kb on - strand, within OKGIIK_03375 at 755.836 kb on - strand, within OKGIIK_03375 at 755.836 kb on - strand, within OKGIIK_03375 at 756.096 kb on + strand at 756.096 kb on + strand at 756.096 kb on + strand at 756.097 kb on - strand at 756.097 kb on - strand at 756.097 kb on - strand at 756.097 kb on - strand at 756.097 kb on - strand at 756.097 kb on - strand at 756.097 kb on - strand at 756.097 kb on - strand at 756.097 kb on - strand at 756.097 kb on - strand at 756.097 kb on - strand at 756.200 kb on - strand, within OKGIIK_03380 at 756.200 kb on - strand, within OKGIIK_03380 at 756.200 kb on - strand, within OKGIIK_03380 at 756.200 kb on - strand, within OKGIIK_03380 at 756.332 kb on + strand at 756.332 kb on + strand at 756.332 kb on + strand at 756.333 kb on - strand at 756.333 kb on - strand at 756.333 kb on - strand at 756.333 kb on - strand at 756.333 kb on - strand at 756.333 kb on - strand at 756.570 kb on - strand, within hflC at 756.707 kb on + strand, within hflC at 756.707 kb on + strand, within hflC at 756.707 kb on + strand, within hflC at 756.708 kb on - strand, within hflC at 756.708 kb on - strand, within hflC at 756.713 kb on + strand, within hflC at 756.713 kb on + strand, within hflC at 756.714 kb on - strand, within hflC at 756.714 kb on - strand, within hflC at 756.714 kb on - strand, within hflC at 756.771 kb on - strand, within hflC at 756.771 kb on - strand, within hflC at 756.968 kb on + strand, within hflC at 756.968 kb on + strand, within hflC at 756.968 kb on + strand, within hflC at 756.968 kb on + strand, within hflC at 756.969 kb on - strand, within hflC at 756.969 kb on - strand, within hflC at 756.969 kb on - strand, within hflC at 756.969 kb on - strand, within hflC at 756.969 kb on - strand, within hflC
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Cadmium chloride 128 uM remove 755,069 - -0.1 755,123 + -0.4 755,123 + -0.5 755,123 + -0.0 755,123 + -0.7 755,123 + -0.4 755,123 + +0.2 755,123 + -2.8 755,123 + +0.7 755,123 + -1.4 755,124 - +0.2 755,124 - -0.7 755,124 - +0.7 755,124 - -1.5 755,124 - +0.3 755,124 - +1.5 755,124 - -0.2 755,195 + +0.2 755,195 + +0.2 755,195 + -1.2 755,195 + -0.2 755,195 + -1.5 755,195 + +0.2 755,196 - +0.7 755,196 - +1.5 755,196 - -0.2 755,316 + OKGIIK_03370 0.38 -1.3 755,316 + OKGIIK_03370 0.38 -2.4 755,316 + OKGIIK_03370 0.38 -0.7 755,316 + OKGIIK_03370 0.38 +0.9 755,316 + OKGIIK_03370 0.38 -1.8 755,316 + OKGIIK_03370 0.38 -2.3 755,316 + OKGIIK_03370 0.38 -0.5 755,317 - OKGIIK_03370 0.38 +0.4 755,317 - OKGIIK_03370 0.38 -0.2 755,317 - OKGIIK_03370 0.38 -0.7 755,317 - OKGIIK_03370 0.38 +0.3 755,317 - OKGIIK_03370 0.38 +0.7 755,317 - OKGIIK_03370 0.38 -0.1 755,433 + OKGIIK_03370 0.69 +0.7 755,433 + OKGIIK_03370 0.69 +0.6 755,433 + OKGIIK_03370 0.69 +0.2 755,434 - OKGIIK_03370 0.69 -1.7 755,835 + OKGIIK_03375 0.58 -0.1 755,835 + OKGIIK_03375 0.58 -0.2 755,836 - OKGIIK_03375 0.58 -2.2 755,836 - OKGIIK_03375 0.58 -1.0 755,836 - OKGIIK_03375 0.58 -0.8 755,836 - OKGIIK_03375 0.58 -0.2 755,836 - OKGIIK_03375 0.58 -0.6 756,096 + -1.9 756,096 + -1.1 756,096 + -0.7 756,097 - -0.2 756,097 - -0.7 756,097 - +0.2 756,097 - -1.2 756,097 - +0.0 756,097 - +0.5 756,097 - -1.2 756,097 - +2.2 756,097 - -0.2 756,097 - -0.4 756,097 - -0.2 756,200 - OKGIIK_03380 0.44 +0.0 756,200 - OKGIIK_03380 0.44 +0.5 756,200 - OKGIIK_03380 0.44 +0.4 756,200 - OKGIIK_03380 0.44 +2.0 756,332 + +1.7 756,332 + +0.7 756,332 + -1.3 756,333 - -1.0 756,333 - -0.1 756,333 - -1.4 756,333 - +0.6 756,333 - +0.3 756,333 - -0.1 756,570 - hflC OKGIIK_03385 0.28 +1.6 756,707 + hflC OKGIIK_03385 0.44 -1.2 756,707 + hflC OKGIIK_03385 0.44 -0.8 756,707 + hflC OKGIIK_03385 0.44 -0.4 756,708 - hflC OKGIIK_03385 0.44 +1.2 756,708 - hflC OKGIIK_03385 0.44 -1.2 756,713 + hflC OKGIIK_03385 0.45 -2.5 756,713 + hflC OKGIIK_03385 0.45 +1.8 756,714 - hflC OKGIIK_03385 0.45 +1.2 756,714 - hflC OKGIIK_03385 0.45 +0.5 756,714 - hflC OKGIIK_03385 0.45 +0.2 756,771 - hflC OKGIIK_03385 0.51 +1.2 756,771 - hflC OKGIIK_03385 0.51 -0.7 756,968 + hflC OKGIIK_03385 0.74 -0.9 756,968 + hflC OKGIIK_03385 0.74 +1.6 756,968 + hflC OKGIIK_03385 0.74 -0.2 756,968 + hflC OKGIIK_03385 0.74 -0.2 756,969 - hflC OKGIIK_03385 0.74 +0.2 756,969 - hflC OKGIIK_03385 0.74 -0.8 756,969 - hflC OKGIIK_03385 0.74 -0.0 756,969 - hflC OKGIIK_03385 0.74 -0.9 756,969 - hflC OKGIIK_03385 0.74 -0.8
Or see this region's nucleotide sequence