Experiment: R2A_PIPES with Cadmium chloride 128 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt grxD and yqjQ overlap by 4 nucleotides yqjQ and marC are separated by 54 nucleotides marC and OKGIIK_03075 are separated by 99 nucleotides
OKGIIK_03060: grxD - Grx4 family monothiol glutaredoxin, at 694,668 to 694,991
grxD
OKGIIK_03065: yqjQ - Short-chain dehydrogenase, at 694,988 to 695,758
yqjQ
OKGIIK_03070: marC - YhgN family NAAT transporter, at 695,813 to 696,424
marC
OKGIIK_03075: OKGIIK_03075 - glycerol acyltransferase, at 696,524 to 698,236
_03075
Position (kb) 695
696
697 Strain fitness (log2 ratio) -2
-1
0
1
2 at 695.078 kb on + strand, within yqjQ at 695.174 kb on + strand, within yqjQ at 695.174 kb on + strand, within yqjQ at 695.174 kb on + strand, within yqjQ at 695.252 kb on + strand, within yqjQ at 695.252 kb on + strand, within yqjQ at 695.252 kb on + strand, within yqjQ at 695.252 kb on + strand, within yqjQ at 695.252 kb on + strand, within yqjQ at 695.252 kb on + strand, within yqjQ at 695.253 kb on - strand, within yqjQ at 695.511 kb on - strand, within yqjQ at 695.636 kb on + strand, within yqjQ at 695.636 kb on + strand, within yqjQ at 695.636 kb on + strand, within yqjQ at 695.696 kb on + strand at 695.696 kb on + strand at 695.696 kb on + strand at 695.696 kb on + strand at 695.696 kb on + strand at 695.697 kb on - strand at 695.697 kb on - strand at 695.697 kb on - strand at 695.697 kb on - strand at 695.697 kb on - strand at 696.084 kb on + strand, within marC at 696.084 kb on + strand, within marC at 696.084 kb on + strand, within marC at 696.084 kb on + strand, within marC at 696.084 kb on + strand, within marC at 696.084 kb on + strand, within marC at 696.085 kb on - strand, within marC at 696.085 kb on - strand, within marC at 696.085 kb on - strand, within marC at 696.085 kb on - strand, within marC at 696.085 kb on - strand, within marC at 696.085 kb on - strand, within marC at 696.085 kb on - strand, within marC at 696.085 kb on - strand, within marC at 696.085 kb on - strand, within marC at 696.085 kb on - strand, within marC at 696.211 kb on + strand, within marC at 696.211 kb on + strand, within marC at 696.212 kb on - strand, within marC at 696.296 kb on + strand, within marC at 696.296 kb on + strand, within marC at 696.296 kb on + strand, within marC at 696.296 kb on + strand, within marC at 696.296 kb on + strand, within marC at 696.296 kb on + strand, within marC at 696.296 kb on + strand, within marC at 696.296 kb on + strand, within marC at 696.296 kb on + strand, within marC at 696.296 kb on + strand, within marC at 696.296 kb on + strand, within marC at 696.297 kb on - strand, within marC at 696.297 kb on - strand, within marC at 696.297 kb on - strand, within marC at 696.297 kb on - strand, within marC at 696.297 kb on - strand, within marC at 696.297 kb on - strand, within marC at 696.297 kb on - strand, within marC at 696.297 kb on - strand, within marC at 696.297 kb on - strand, within marC at 696.376 kb on - strand at 696.482 kb on + strand at 696.482 kb on + strand at 696.483 kb on - strand at 696.483 kb on - strand at 696.483 kb on - strand at 696.483 kb on - strand at 696.532 kb on + strand at 696.532 kb on + strand at 696.533 kb on - strand at 696.834 kb on + strand, within OKGIIK_03075 at 696.834 kb on + strand, within OKGIIK_03075 at 696.949 kb on + strand, within OKGIIK_03075 at 696.949 kb on + strand, within OKGIIK_03075 at 696.949 kb on + strand, within OKGIIK_03075 at 696.949 kb on + strand, within OKGIIK_03075 at 696.949 kb on + strand, within OKGIIK_03075 at 696.950 kb on - strand, within OKGIIK_03075 at 696.950 kb on - strand, within OKGIIK_03075 at 696.950 kb on - strand, within OKGIIK_03075 at 696.950 kb on - strand, within OKGIIK_03075 at 696.950 kb on - strand, within OKGIIK_03075 at 696.950 kb on - strand, within OKGIIK_03075 at 696.950 kb on - strand, within OKGIIK_03075 at 696.950 kb on - strand, within OKGIIK_03075 at 696.950 kb on - strand, within OKGIIK_03075 at 696.950 kb on - strand, within OKGIIK_03075 at 696.950 kb on - strand, within OKGIIK_03075 at 696.950 kb on - strand, within OKGIIK_03075 at 696.950 kb on - strand, within OKGIIK_03075 at 696.953 kb on + strand, within OKGIIK_03075 at 696.953 kb on + strand, within OKGIIK_03075 at 696.953 kb on + strand, within OKGIIK_03075 at 696.953 kb on + strand, within OKGIIK_03075 at 696.953 kb on + strand, within OKGIIK_03075 at 696.953 kb on + strand, within OKGIIK_03075 at 696.953 kb on + strand, within OKGIIK_03075 at 696.954 kb on - strand, within OKGIIK_03075 at 696.954 kb on - strand, within OKGIIK_03075 at 696.954 kb on - strand, within OKGIIK_03075 at 696.954 kb on - strand, within OKGIIK_03075 at 696.954 kb on - strand, within OKGIIK_03075 at 697.130 kb on + strand, within OKGIIK_03075 at 697.130 kb on + strand, within OKGIIK_03075 at 697.130 kb on + strand, within OKGIIK_03075 at 697.130 kb on + strand, within OKGIIK_03075 at 697.130 kb on + strand, within OKGIIK_03075 at 697.131 kb on - strand, within OKGIIK_03075 at 697.131 kb on - strand, within OKGIIK_03075 at 697.131 kb on - strand, within OKGIIK_03075 at 697.131 kb on - strand, within OKGIIK_03075 at 697.131 kb on - strand, within OKGIIK_03075
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Cadmium chloride 128 uM remove 695,078 + yqjQ OKGIIK_03065 0.12 +0.1 695,174 + yqjQ OKGIIK_03065 0.24 -0.9 695,174 + yqjQ OKGIIK_03065 0.24 -1.2 695,174 + yqjQ OKGIIK_03065 0.24 -0.9 695,252 + yqjQ OKGIIK_03065 0.34 -0.4 695,252 + yqjQ OKGIIK_03065 0.34 -0.2 695,252 + yqjQ OKGIIK_03065 0.34 -0.2 695,252 + yqjQ OKGIIK_03065 0.34 -0.6 695,252 + yqjQ OKGIIK_03065 0.34 +0.6 695,252 + yqjQ OKGIIK_03065 0.34 -0.7 695,253 - yqjQ OKGIIK_03065 0.34 -1.4 695,511 - yqjQ OKGIIK_03065 0.68 +2.1 695,636 + yqjQ OKGIIK_03065 0.84 -0.7 695,636 + yqjQ OKGIIK_03065 0.84 -0.7 695,636 + yqjQ OKGIIK_03065 0.84 +0.1 695,696 + -1.0 695,696 + +0.1 695,696 + +1.7 695,696 + +1.0 695,696 + +0.1 695,697 - -0.7 695,697 - -0.9 695,697 - -0.4 695,697 - +0.4 695,697 - -0.9 696,084 + marC OKGIIK_03070 0.44 -0.4 696,084 + marC OKGIIK_03070 0.44 +0.8 696,084 + marC OKGIIK_03070 0.44 -1.3 696,084 + marC OKGIIK_03070 0.44 +1.4 696,084 + marC OKGIIK_03070 0.44 +0.8 696,084 + marC OKGIIK_03070 0.44 -1.3 696,085 - marC OKGIIK_03070 0.44 -0.5 696,085 - marC OKGIIK_03070 0.44 -1.9 696,085 - marC OKGIIK_03070 0.44 +1.0 696,085 - marC OKGIIK_03070 0.44 -0.7 696,085 - marC OKGIIK_03070 0.44 +1.0 696,085 - marC OKGIIK_03070 0.44 -0.9 696,085 - marC OKGIIK_03070 0.44 +0.6 696,085 - marC OKGIIK_03070 0.44 -1.3 696,085 - marC OKGIIK_03070 0.44 +1.3 696,085 - marC OKGIIK_03070 0.44 +0.0 696,211 + marC OKGIIK_03070 0.65 +0.4 696,211 + marC OKGIIK_03070 0.65 -0.2 696,212 - marC OKGIIK_03070 0.65 -0.7 696,296 + marC OKGIIK_03070 0.79 -1.7 696,296 + marC OKGIIK_03070 0.79 -2.1 696,296 + marC OKGIIK_03070 0.79 -0.7 696,296 + marC OKGIIK_03070 0.79 -0.2 696,296 + marC OKGIIK_03070 0.79 -1.9 696,296 + marC OKGIIK_03070 0.79 -0.3 696,296 + marC OKGIIK_03070 0.79 -1.3 696,296 + marC OKGIIK_03070 0.79 -0.4 696,296 + marC OKGIIK_03070 0.79 -1.3 696,296 + marC OKGIIK_03070 0.79 -1.9 696,296 + marC OKGIIK_03070 0.79 -0.9 696,297 - marC OKGIIK_03070 0.79 +0.1 696,297 - marC OKGIIK_03070 0.79 -1.2 696,297 - marC OKGIIK_03070 0.79 -1.4 696,297 - marC OKGIIK_03070 0.79 -1.0 696,297 - marC OKGIIK_03070 0.79 -2.5 696,297 - marC OKGIIK_03070 0.79 -0.2 696,297 - marC OKGIIK_03070 0.79 -0.3 696,297 - marC OKGIIK_03070 0.79 -2.3 696,297 - marC OKGIIK_03070 0.79 -0.7 696,376 - -0.4 696,482 + -0.9 696,482 + +0.7 696,483 - -0.3 696,483 - +0.1 696,483 - -0.7 696,483 - -0.8 696,532 + -0.2 696,532 + -0.4 696,533 - +0.1 696,834 + OKGIIK_03075 0.18 -0.7 696,834 + OKGIIK_03075 0.18 -2.0 696,949 + OKGIIK_03075 0.25 -0.9 696,949 + OKGIIK_03075 0.25 -0.9 696,949 + OKGIIK_03075 0.25 -0.8 696,949 + OKGIIK_03075 0.25 +0.7 696,949 + OKGIIK_03075 0.25 +0.1 696,950 - OKGIIK_03075 0.25 -0.7 696,950 - OKGIIK_03075 0.25 +0.6 696,950 - OKGIIK_03075 0.25 -0.2 696,950 - OKGIIK_03075 0.25 +0.1 696,950 - OKGIIK_03075 0.25 +0.7 696,950 - OKGIIK_03075 0.25 -0.9 696,950 - OKGIIK_03075 0.25 +0.4 696,950 - OKGIIK_03075 0.25 -0.6 696,950 - OKGIIK_03075 0.25 -0.4 696,950 - OKGIIK_03075 0.25 -0.2 696,950 - OKGIIK_03075 0.25 +1.1 696,950 - OKGIIK_03075 0.25 -0.6 696,950 - OKGIIK_03075 0.25 +0.3 696,953 + OKGIIK_03075 0.25 -0.0 696,953 + OKGIIK_03075 0.25 -0.4 696,953 + OKGIIK_03075 0.25 -0.2 696,953 + OKGIIK_03075 0.25 +1.4 696,953 + OKGIIK_03075 0.25 +1.1 696,953 + OKGIIK_03075 0.25 -1.7 696,953 + OKGIIK_03075 0.25 -0.7 696,954 - OKGIIK_03075 0.25 +1.4 696,954 - OKGIIK_03075 0.25 -0.9 696,954 - OKGIIK_03075 0.25 -0.2 696,954 - OKGIIK_03075 0.25 -0.4 696,954 - OKGIIK_03075 0.25 -0.3 697,130 + OKGIIK_03075 0.35 +0.1 697,130 + OKGIIK_03075 0.35 -0.2 697,130 + OKGIIK_03075 0.35 -0.4 697,130 + OKGIIK_03075 0.35 -0.2 697,130 + OKGIIK_03075 0.35 -0.7 697,131 - OKGIIK_03075 0.35 +0.7 697,131 - OKGIIK_03075 0.35 -1.8 697,131 - OKGIIK_03075 0.35 -1.0 697,131 - OKGIIK_03075 0.35 -0.2 697,131 - OKGIIK_03075 0.35 +0.4
Or see this region's nucleotide sequence