Experiment: R2A_PIPES with Cadmium chloride 128 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ggt and OKGIIK_02605 are separated by 10 nucleotides OKGIIK_02605 and OKGIIK_02610 are separated by 1 nucleotides OKGIIK_02610 and OKGIIK_02615 overlap by 1 nucleotides
OKGIIK_02600: ggt - gamma-glutamyltransferase, at 607,859 to 609,598
ggt
OKGIIK_02605: OKGIIK_02605 - hypothetical protein, at 609,609 to 609,764
_02605
OKGIIK_02610: OKGIIK_02610 - MBL fold metallo-hydrolase, at 609,766 to 610,638
_02610
OKGIIK_02615: OKGIIK_02615 - Transmembrane protein 43, at 610,638 to 611,672
_02615
Position (kb) 609
610
611 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 608.831 kb on + strand, within ggt at 608.831 kb on + strand, within ggt at 608.831 kb on + strand, within ggt at 608.831 kb on + strand, within ggt at 608.831 kb on + strand, within ggt at 608.831 kb on + strand, within ggt at 608.831 kb on + strand, within ggt at 608.831 kb on + strand, within ggt at 608.831 kb on + strand, within ggt at 608.831 kb on + strand, within ggt at 608.831 kb on + strand, within ggt at 608.831 kb on + strand, within ggt at 608.831 kb on + strand, within ggt at 608.831 kb on + strand, within ggt at 608.831 kb on + strand, within ggt at 608.831 kb on + strand, within ggt at 608.831 kb on + strand, within ggt at 608.831 kb on + strand, within ggt at 608.831 kb on + strand, within ggt at 608.831 kb on + strand, within ggt at 608.832 kb on - strand, within ggt at 608.832 kb on - strand, within ggt at 608.832 kb on - strand, within ggt at 608.832 kb on - strand, within ggt at 608.832 kb on - strand, within ggt at 608.832 kb on - strand, within ggt at 608.832 kb on - strand, within ggt at 608.832 kb on - strand, within ggt at 608.832 kb on - strand, within ggt at 608.832 kb on - strand, within ggt at 608.832 kb on - strand, within ggt at 608.876 kb on + strand, within ggt at 608.876 kb on + strand, within ggt at 608.876 kb on + strand, within ggt at 608.876 kb on + strand, within ggt at 608.877 kb on - strand, within ggt at 608.877 kb on - strand, within ggt at 608.877 kb on - strand, within ggt at 608.877 kb on - strand, within ggt at 608.877 kb on - strand, within ggt at 608.877 kb on - strand, within ggt at 608.877 kb on - strand, within ggt at 608.933 kb on + strand, within ggt at 608.933 kb on + strand, within ggt at 608.933 kb on + strand, within ggt at 608.934 kb on - strand, within ggt at 608.934 kb on - strand, within ggt at 608.934 kb on - strand, within ggt at 608.934 kb on - strand, within ggt at 609.089 kb on + strand, within ggt at 609.089 kb on + strand, within ggt at 609.089 kb on + strand, within ggt at 609.089 kb on + strand, within ggt at 609.089 kb on + strand, within ggt at 609.089 kb on + strand, within ggt at 609.089 kb on + strand, within ggt at 609.089 kb on + strand, within ggt at 609.089 kb on + strand, within ggt at 609.089 kb on + strand, within ggt at 609.089 kb on + strand, within ggt at 609.089 kb on + strand, within ggt at 609.089 kb on + strand, within ggt at 609.089 kb on + strand, within ggt at 609.090 kb on - strand, within ggt at 609.090 kb on - strand, within ggt at 609.090 kb on - strand, within ggt at 609.090 kb on - strand, within ggt at 609.090 kb on - strand, within ggt at 609.090 kb on - strand, within ggt at 609.090 kb on - strand, within ggt at 609.090 kb on - strand, within ggt at 609.090 kb on - strand, within ggt at 609.090 kb on - strand, within ggt at 609.090 kb on - strand, within ggt at 609.185 kb on + strand, within ggt at 609.185 kb on + strand, within ggt at 609.185 kb on + strand, within ggt at 609.185 kb on + strand, within ggt at 609.185 kb on + strand, within ggt at 609.186 kb on - strand, within ggt at 609.186 kb on - strand, within ggt at 609.186 kb on - strand, within ggt at 609.401 kb on + strand, within ggt at 609.401 kb on + strand, within ggt at 609.401 kb on + strand, within ggt at 609.401 kb on + strand, within ggt at 609.401 kb on + strand, within ggt at 609.401 kb on + strand, within ggt at 609.401 kb on + strand, within ggt at 609.401 kb on + strand, within ggt at 609.401 kb on + strand, within ggt at 609.401 kb on + strand, within ggt at 609.401 kb on + strand, within ggt at 609.402 kb on - strand, within ggt at 609.402 kb on - strand, within ggt at 609.402 kb on - strand, within ggt at 609.402 kb on - strand, within ggt at 609.402 kb on - strand, within ggt at 609.402 kb on - strand, within ggt at 609.402 kb on - strand, within ggt at 609.402 kb on - strand, within ggt at 609.402 kb on - strand, within ggt at 609.476 kb on + strand at 609.476 kb on + strand at 609.476 kb on + strand at 609.477 kb on - strand at 609.477 kb on - strand at 609.477 kb on - strand at 609.477 kb on - strand at 609.596 kb on + strand at 609.597 kb on - strand at 609.597 kb on - strand at 609.597 kb on - strand at 609.597 kb on - strand at 609.597 kb on - strand at 609.597 kb on - strand at 609.597 kb on - strand at 609.758 kb on + strand at 609.758 kb on + strand at 609.758 kb on + strand at 609.758 kb on + strand at 609.758 kb on + strand at 609.758 kb on + strand at 609.758 kb on + strand at 609.758 kb on + strand at 610.034 kb on + strand, within OKGIIK_02610 at 610.034 kb on + strand, within OKGIIK_02610 at 610.034 kb on + strand, within OKGIIK_02610 at 610.035 kb on - strand, within OKGIIK_02610 at 610.035 kb on - strand, within OKGIIK_02610 at 610.035 kb on - strand, within OKGIIK_02610 at 610.432 kb on + strand, within OKGIIK_02610 at 610.752 kb on + strand, within OKGIIK_02615 at 610.753 kb on - strand, within OKGIIK_02615 at 610.977 kb on + strand, within OKGIIK_02615 at 610.977 kb on + strand, within OKGIIK_02615 at 610.977 kb on + strand, within OKGIIK_02615 at 610.978 kb on - strand, within OKGIIK_02615 at 610.978 kb on - strand, within OKGIIK_02615 at 610.978 kb on - strand, within OKGIIK_02615 at 610.978 kb on - strand, within OKGIIK_02615 at 610.978 kb on - strand, within OKGIIK_02615 at 610.978 kb on - strand, within OKGIIK_02615 at 610.978 kb on - strand, within OKGIIK_02615 at 611.217 kb on + strand, within OKGIIK_02615 at 611.217 kb on + strand, within OKGIIK_02615 at 611.217 kb on + strand, within OKGIIK_02615 at 611.217 kb on + strand, within OKGIIK_02615 at 611.218 kb on - strand, within OKGIIK_02615 at 611.218 kb on - strand, within OKGIIK_02615 at 611.218 kb on - strand, within OKGIIK_02615 at 611.218 kb on - strand, within OKGIIK_02615 at 611.218 kb on - strand, within OKGIIK_02615 at 611.218 kb on - strand, within OKGIIK_02615 at 611.367 kb on + strand, within OKGIIK_02615 at 611.367 kb on + strand, within OKGIIK_02615 at 611.367 kb on + strand, within OKGIIK_02615 at 611.367 kb on + strand, within OKGIIK_02615 at 611.367 kb on + strand, within OKGIIK_02615 at 611.367 kb on + strand, within OKGIIK_02615 at 611.367 kb on + strand, within OKGIIK_02615 at 611.367 kb on + strand, within OKGIIK_02615 at 611.367 kb on + strand, within OKGIIK_02615 at 611.367 kb on + strand, within OKGIIK_02615 at 611.367 kb on + strand, within OKGIIK_02615 at 611.367 kb on + strand, within OKGIIK_02615 at 611.367 kb on + strand, within OKGIIK_02615 at 611.367 kb on + strand, within OKGIIK_02615 at 611.367 kb on + strand, within OKGIIK_02615 at 611.368 kb on - strand, within OKGIIK_02615 at 611.368 kb on - strand, within OKGIIK_02615 at 611.368 kb on - strand, within OKGIIK_02615 at 611.368 kb on - strand, within OKGIIK_02615 at 611.368 kb on - strand, within OKGIIK_02615 at 611.368 kb on - strand, within OKGIIK_02615 at 611.368 kb on - strand, within OKGIIK_02615 at 611.368 kb on - strand, within OKGIIK_02615 at 611.368 kb on - strand, within OKGIIK_02615 at 611.368 kb on - strand, within OKGIIK_02615 at 611.368 kb on - strand, within OKGIIK_02615 at 611.609 kb on - strand at 611.609 kb on - strand at 611.609 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Cadmium chloride 128 uM remove 608,831 + ggt OKGIIK_02600 0.56 -0.5 608,831 + ggt OKGIIK_02600 0.56 -0.7 608,831 + ggt OKGIIK_02600 0.56 -1.2 608,831 + ggt OKGIIK_02600 0.56 -1.4 608,831 + ggt OKGIIK_02600 0.56 -0.7 608,831 + ggt OKGIIK_02600 0.56 -0.4 608,831 + ggt OKGIIK_02600 0.56 +0.3 608,831 + ggt OKGIIK_02600 0.56 -1.1 608,831 + ggt OKGIIK_02600 0.56 +0.1 608,831 + ggt OKGIIK_02600 0.56 -0.5 608,831 + ggt OKGIIK_02600 0.56 -1.4 608,831 + ggt OKGIIK_02600 0.56 -1.0 608,831 + ggt OKGIIK_02600 0.56 -1.9 608,831 + ggt OKGIIK_02600 0.56 -1.7 608,831 + ggt OKGIIK_02600 0.56 -1.2 608,831 + ggt OKGIIK_02600 0.56 -1.1 608,831 + ggt OKGIIK_02600 0.56 -0.7 608,831 + ggt OKGIIK_02600 0.56 -0.1 608,831 + ggt OKGIIK_02600 0.56 -0.6 608,831 + ggt OKGIIK_02600 0.56 +0.8 608,832 - ggt OKGIIK_02600 0.56 -1.2 608,832 - ggt OKGIIK_02600 0.56 -1.1 608,832 - ggt OKGIIK_02600 0.56 +1.1 608,832 - ggt OKGIIK_02600 0.56 -0.8 608,832 - ggt OKGIIK_02600 0.56 -2.8 608,832 - ggt OKGIIK_02600 0.56 -1.2 608,832 - ggt OKGIIK_02600 0.56 +0.1 608,832 - ggt OKGIIK_02600 0.56 -0.1 608,832 - ggt OKGIIK_02600 0.56 -0.7 608,832 - ggt OKGIIK_02600 0.56 -0.2 608,832 - ggt OKGIIK_02600 0.56 -1.3 608,876 + ggt OKGIIK_02600 0.58 -1.6 608,876 + ggt OKGIIK_02600 0.58 -0.7 608,876 + ggt OKGIIK_02600 0.58 +0.1 608,876 + ggt OKGIIK_02600 0.58 -1.3 608,877 - ggt OKGIIK_02600 0.59 -1.4 608,877 - ggt OKGIIK_02600 0.59 -0.2 608,877 - ggt OKGIIK_02600 0.59 -0.7 608,877 - ggt OKGIIK_02600 0.59 -1.3 608,877 - ggt OKGIIK_02600 0.59 +0.5 608,877 - ggt OKGIIK_02600 0.59 -2.2 608,877 - ggt OKGIIK_02600 0.59 -1.1 608,933 + ggt OKGIIK_02600 0.62 +0.0 608,933 + ggt OKGIIK_02600 0.62 -0.2 608,933 + ggt OKGIIK_02600 0.62 -0.7 608,934 - ggt OKGIIK_02600 0.62 +0.1 608,934 - ggt OKGIIK_02600 0.62 +1.0 608,934 - ggt OKGIIK_02600 0.62 -0.0 608,934 - ggt OKGIIK_02600 0.62 -2.0 609,089 + ggt OKGIIK_02600 0.71 +0.5 609,089 + ggt OKGIIK_02600 0.71 -0.2 609,089 + ggt OKGIIK_02600 0.71 +0.3 609,089 + ggt OKGIIK_02600 0.71 +0.8 609,089 + ggt OKGIIK_02600 0.71 +1.1 609,089 + ggt OKGIIK_02600 0.71 -1.1 609,089 + ggt OKGIIK_02600 0.71 -0.5 609,089 + ggt OKGIIK_02600 0.71 -1.6 609,089 + ggt OKGIIK_02600 0.71 -0.1 609,089 + ggt OKGIIK_02600 0.71 -1.2 609,089 + ggt OKGIIK_02600 0.71 -0.4 609,089 + ggt OKGIIK_02600 0.71 +0.2 609,089 + ggt OKGIIK_02600 0.71 -0.2 609,089 + ggt OKGIIK_02600 0.71 -1.0 609,090 - ggt OKGIIK_02600 0.71 +0.4 609,090 - ggt OKGIIK_02600 0.71 +0.4 609,090 - ggt OKGIIK_02600 0.71 +0.4 609,090 - ggt OKGIIK_02600 0.71 +1.1 609,090 - ggt OKGIIK_02600 0.71 +1.9 609,090 - ggt OKGIIK_02600 0.71 -1.6 609,090 - ggt OKGIIK_02600 0.71 +0.4 609,090 - ggt OKGIIK_02600 0.71 -0.8 609,090 - ggt OKGIIK_02600 0.71 +0.4 609,090 - ggt OKGIIK_02600 0.71 -1.3 609,090 - ggt OKGIIK_02600 0.71 +1.7 609,185 + ggt OKGIIK_02600 0.76 +0.1 609,185 + ggt OKGIIK_02600 0.76 -0.2 609,185 + ggt OKGIIK_02600 0.76 -0.7 609,185 + ggt OKGIIK_02600 0.76 +0.5 609,185 + ggt OKGIIK_02600 0.76 -2.0 609,186 - ggt OKGIIK_02600 0.76 -0.1 609,186 - ggt OKGIIK_02600 0.76 +0.1 609,186 - ggt OKGIIK_02600 0.76 +1.3 609,401 + ggt OKGIIK_02600 0.89 -0.5 609,401 + ggt OKGIIK_02600 0.89 -1.7 609,401 + ggt OKGIIK_02600 0.89 +2.1 609,401 + ggt OKGIIK_02600 0.89 -2.5 609,401 + ggt OKGIIK_02600 0.89 -0.7 609,401 + ggt OKGIIK_02600 0.89 +1.7 609,401 + ggt OKGIIK_02600 0.89 +0.1 609,401 + ggt OKGIIK_02600 0.89 -0.0 609,401 + ggt OKGIIK_02600 0.89 -0.0 609,401 + ggt OKGIIK_02600 0.89 -1.3 609,401 + ggt OKGIIK_02600 0.89 +1.4 609,402 - ggt OKGIIK_02600 0.89 +1.1 609,402 - ggt OKGIIK_02600 0.89 +1.9 609,402 - ggt OKGIIK_02600 0.89 -0.1 609,402 - ggt OKGIIK_02600 0.89 -1.5 609,402 - ggt OKGIIK_02600 0.89 -3.4 609,402 - ggt OKGIIK_02600 0.89 -1.4 609,402 - ggt OKGIIK_02600 0.89 -0.2 609,402 - ggt OKGIIK_02600 0.89 -0.5 609,402 - ggt OKGIIK_02600 0.89 -1.5 609,476 + -0.8 609,476 + -1.2 609,476 + +0.0 609,477 - -0.9 609,477 - -1.2 609,477 - +0.3 609,477 - +0.1 609,596 + -0.6 609,597 - -1.4 609,597 - +0.8 609,597 - -0.5 609,597 - -0.9 609,597 - +0.1 609,597 - -1.9 609,597 - -1.4 609,758 + +0.3 609,758 + -0.5 609,758 + -0.2 609,758 + -0.9 609,758 + -0.4 609,758 + -0.5 609,758 + +1.7 609,758 + -1.7 610,034 + OKGIIK_02610 0.31 -0.2 610,034 + OKGIIK_02610 0.31 -3.1 610,034 + OKGIIK_02610 0.31 +1.4 610,035 - OKGIIK_02610 0.31 -1.5 610,035 - OKGIIK_02610 0.31 -0.4 610,035 - OKGIIK_02610 0.31 -1.5 610,432 + OKGIIK_02610 0.76 -2.1 610,752 + OKGIIK_02615 0.11 +1.4 610,753 - OKGIIK_02615 0.11 +0.1 610,977 + OKGIIK_02615 0.33 -1.4 610,977 + OKGIIK_02615 0.33 -1.8 610,977 + OKGIIK_02615 0.33 -1.4 610,978 - OKGIIK_02615 0.33 -0.2 610,978 - OKGIIK_02615 0.33 -0.0 610,978 - OKGIIK_02615 0.33 +0.5 610,978 - OKGIIK_02615 0.33 -0.2 610,978 - OKGIIK_02615 0.33 -2.6 610,978 - OKGIIK_02615 0.33 -1.1 610,978 - OKGIIK_02615 0.33 -0.3 611,217 + OKGIIK_02615 0.56 -0.4 611,217 + OKGIIK_02615 0.56 -0.7 611,217 + OKGIIK_02615 0.56 +0.8 611,217 + OKGIIK_02615 0.56 +0.0 611,218 - OKGIIK_02615 0.56 -0.8 611,218 - OKGIIK_02615 0.56 -0.2 611,218 - OKGIIK_02615 0.56 +0.4 611,218 - OKGIIK_02615 0.56 +0.2 611,218 - OKGIIK_02615 0.56 +1.1 611,218 - OKGIIK_02615 0.56 +1.6 611,367 + OKGIIK_02615 0.70 +0.8 611,367 + OKGIIK_02615 0.70 +0.3 611,367 + OKGIIK_02615 0.70 -0.5 611,367 + OKGIIK_02615 0.70 -1.2 611,367 + OKGIIK_02615 0.70 -0.9 611,367 + OKGIIK_02615 0.70 -1.4 611,367 + OKGIIK_02615 0.70 -0.2 611,367 + OKGIIK_02615 0.70 -0.5 611,367 + OKGIIK_02615 0.70 -1.1 611,367 + OKGIIK_02615 0.70 -1.1 611,367 + OKGIIK_02615 0.70 +0.4 611,367 + OKGIIK_02615 0.70 -0.2 611,367 + OKGIIK_02615 0.70 +0.1 611,367 + OKGIIK_02615 0.70 +0.1 611,367 + OKGIIK_02615 0.70 +0.9 611,368 - OKGIIK_02615 0.71 -0.2 611,368 - OKGIIK_02615 0.71 -0.8 611,368 - OKGIIK_02615 0.71 -0.2 611,368 - OKGIIK_02615 0.71 +0.7 611,368 - OKGIIK_02615 0.71 +0.9 611,368 - OKGIIK_02615 0.71 +1.6 611,368 - OKGIIK_02615 0.71 +2.4 611,368 - OKGIIK_02615 0.71 +0.1 611,368 - OKGIIK_02615 0.71 -2.6 611,368 - OKGIIK_02615 0.71 +0.5 611,368 - OKGIIK_02615 0.71 -0.1 611,609 - +0.5 611,609 - -0.5 611,609 - -0.9
Or see this region's nucleotide sequence