Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_04353 and OHPLBJKB_04354 are separated by 92 nucleotides OHPLBJKB_04354 and OHPLBJKB_04355 are separated by 720 nucleotides
OHPLBJKB_04353: OHPLBJKB_04353 - Carboxylesterase A, at 2,760 to 4,259
_04353
OHPLBJKB_04354: OHPLBJKB_04354 - Outer membrane protease OmpP, at 4,352 to 5,299
_04354
OHPLBJKB_04355: OHPLBJKB_04355 - hypothetical protein, at 6,020 to 10,135
_04355
Position (kb) 4
5
6 Strain fitness (log2 ratio) -2
-1
0
1
2 at 3.357 kb on - strand, within OHPLBJKB_04353 at 3.389 kb on + strand, within OHPLBJKB_04353 at 3.389 kb on + strand, within OHPLBJKB_04353 at 3.424 kb on - strand, within OHPLBJKB_04353 at 3.615 kb on + strand, within OHPLBJKB_04353 at 3.703 kb on - strand, within OHPLBJKB_04353 at 3.749 kb on + strand, within OHPLBJKB_04353 at 3.795 kb on + strand, within OHPLBJKB_04353 at 3.835 kb on - strand, within OHPLBJKB_04353 at 3.968 kb on + strand, within OHPLBJKB_04353 at 4.086 kb on + strand, within OHPLBJKB_04353 at 4.214 kb on + strand at 4.318 kb on + strand at 4.603 kb on - strand, within OHPLBJKB_04354 at 4.922 kb on - strand, within OHPLBJKB_04354 at 5.326 kb on - strand at 5.326 kb on - strand at 5.329 kb on + strand at 5.329 kb on + strand at 5.329 kb on + strand at 5.329 kb on + strand at 5.329 kb on + strand at 5.329 kb on + strand at 5.330 kb on - strand at 5.330 kb on - strand at 5.330 kb on - strand at 5.330 kb on - strand at 5.330 kb on - strand at 5.330 kb on - strand at 5.333 kb on + strand at 5.335 kb on + strand at 5.424 kb on + strand at 5.462 kb on + strand at 5.463 kb on - strand at 5.463 kb on - strand at 5.463 kb on - strand at 5.496 kb on - strand at 5.535 kb on + strand at 5.536 kb on - strand at 5.554 kb on + strand at 5.555 kb on - strand at 5.585 kb on - strand at 5.617 kb on - strand at 5.624 kb on - strand at 5.695 kb on - strand at 5.848 kb on + strand at 5.966 kb on + strand at 6.169 kb on - strand at 6.292 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 3,357 - OHPLBJKB_04353 0.40 +0.5 3,389 + OHPLBJKB_04353 0.42 +0.2 3,389 + OHPLBJKB_04353 0.42 +1.1 3,424 - OHPLBJKB_04353 0.44 -0.3 3,615 + OHPLBJKB_04353 0.57 +1.6 3,703 - OHPLBJKB_04353 0.63 -2.0 3,749 + OHPLBJKB_04353 0.66 +2.0 3,795 + OHPLBJKB_04353 0.69 +0.1 3,835 - OHPLBJKB_04353 0.72 -0.3 3,968 + OHPLBJKB_04353 0.81 -1.4 4,086 + OHPLBJKB_04353 0.88 +0.7 4,214 + -0.7 4,318 + -0.8 4,603 - OHPLBJKB_04354 0.26 -0.1 4,922 - OHPLBJKB_04354 0.60 +1.1 5,326 - +0.8 5,326 - +0.1 5,329 + +1.3 5,329 + +0.7 5,329 + -0.3 5,329 + -0.5 5,329 + +1.1 5,329 + -0.2 5,330 - +1.5 5,330 - +0.1 5,330 - +0.6 5,330 - +0.1 5,330 - +1.3 5,330 - +0.9 5,333 + +0.5 5,335 + +0.3 5,424 + +0.3 5,462 + +1.1 5,463 - -0.3 5,463 - -1.0 5,463 - +1.1 5,496 - +0.5 5,535 + -2.2 5,536 - +0.6 5,554 + +1.3 5,555 - +1.3 5,585 - -1.4 5,617 - -0.7 5,624 - +1.3 5,695 - +0.5 5,848 + -0.6 5,966 + -0.5 6,169 - -0.5 6,292 + +0.9
Or see this region's nucleotide sequence