Experiment: lib only
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_01175 and OHPLBJKB_01176 are separated by 144 nucleotides OHPLBJKB_01176 and OHPLBJKB_01177 are separated by 118 nucleotides
OHPLBJKB_01175: OHPLBJKB_01175 - hypothetical protein, at 1,207,825 to 1,208,679
_01175
OHPLBJKB_01176: OHPLBJKB_01176 - Inositol-1-monophosphatase, at 1,208,824 to 1,209,627
_01176
OHPLBJKB_01177: OHPLBJKB_01177 - 'tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ' transl_table=11, at 1,209,746 to 1,210,486
_01177
Position (kb)
1208
1209
1210 Strain fitness (log2 ratio)
-1
0
1
2 at 1207.826 kb on + strand at 1207.826 kb on + strand at 1207.827 kb on - strand at 1207.930 kb on + strand, within OHPLBJKB_01175 at 1207.930 kb on + strand, within OHPLBJKB_01175 at 1207.963 kb on - strand, within OHPLBJKB_01175 at 1207.964 kb on + strand, within OHPLBJKB_01175 at 1207.964 kb on + strand, within OHPLBJKB_01175 at 1207.965 kb on - strand, within OHPLBJKB_01175 at 1207.965 kb on - strand, within OHPLBJKB_01175 at 1207.965 kb on - strand, within OHPLBJKB_01175 at 1208.020 kb on + strand, within OHPLBJKB_01175 at 1208.021 kb on - strand, within OHPLBJKB_01175 at 1208.021 kb on - strand, within OHPLBJKB_01175 at 1208.051 kb on + strand, within OHPLBJKB_01175 at 1208.066 kb on + strand, within OHPLBJKB_01175 at 1208.066 kb on + strand, within OHPLBJKB_01175 at 1208.067 kb on - strand, within OHPLBJKB_01175 at 1208.067 kb on - strand, within OHPLBJKB_01175 at 1208.080 kb on + strand, within OHPLBJKB_01175 at 1208.080 kb on + strand, within OHPLBJKB_01175 at 1208.080 kb on + strand, within OHPLBJKB_01175 at 1208.081 kb on - strand, within OHPLBJKB_01175 at 1208.081 kb on - strand, within OHPLBJKB_01175 at 1208.084 kb on + strand, within OHPLBJKB_01175 at 1208.084 kb on + strand, within OHPLBJKB_01175 at 1208.123 kb on + strand, within OHPLBJKB_01175 at 1208.124 kb on - strand, within OHPLBJKB_01175 at 1208.124 kb on - strand, within OHPLBJKB_01175 at 1208.158 kb on + strand, within OHPLBJKB_01175 at 1208.158 kb on + strand, within OHPLBJKB_01175 at 1208.158 kb on + strand, within OHPLBJKB_01175 at 1208.158 kb on + strand, within OHPLBJKB_01175 at 1208.158 kb on + strand, within OHPLBJKB_01175 at 1208.158 kb on + strand, within OHPLBJKB_01175 at 1208.158 kb on + strand, within OHPLBJKB_01175 at 1208.158 kb on + strand, within OHPLBJKB_01175 at 1208.159 kb on - strand, within OHPLBJKB_01175 at 1208.211 kb on + strand, within OHPLBJKB_01175 at 1208.245 kb on + strand, within OHPLBJKB_01175 at 1208.245 kb on + strand, within OHPLBJKB_01175 at 1208.286 kb on + strand, within OHPLBJKB_01175 at 1208.352 kb on + strand, within OHPLBJKB_01175 at 1208.352 kb on + strand, within OHPLBJKB_01175 at 1208.368 kb on - strand, within OHPLBJKB_01175 at 1208.368 kb on - strand, within OHPLBJKB_01175 at 1208.368 kb on - strand, within OHPLBJKB_01175 at 1208.409 kb on + strand, within OHPLBJKB_01175 at 1208.409 kb on + strand, within OHPLBJKB_01175 at 1208.410 kb on - strand, within OHPLBJKB_01175 at 1208.576 kb on + strand, within OHPLBJKB_01175 at 1208.576 kb on + strand, within OHPLBJKB_01175 at 1208.576 kb on + strand, within OHPLBJKB_01175 at 1208.576 kb on + strand, within OHPLBJKB_01175 at 1208.577 kb on - strand, within OHPLBJKB_01175 at 1208.577 kb on - strand, within OHPLBJKB_01175 at 1208.577 kb on - strand, within OHPLBJKB_01175 at 1208.605 kb on + strand at 1208.610 kb on - strand at 1208.638 kb on - strand at 1208.702 kb on - strand at 1208.702 kb on - strand at 1208.712 kb on - strand at 1208.749 kb on + strand at 1208.765 kb on + strand at 1208.766 kb on - strand at 1209.705 kb on + strand at 1209.757 kb on + strand at 1209.964 kb on + strand, within OHPLBJKB_01177 at 1209.965 kb on - strand, within OHPLBJKB_01177 at 1210.163 kb on + strand, within OHPLBJKB_01177 at 1210.205 kb on + strand, within OHPLBJKB_01177 at 1210.205 kb on + strand, within OHPLBJKB_01177 at 1210.206 kb on - strand, within OHPLBJKB_01177 at 1210.304 kb on + strand, within OHPLBJKB_01177 at 1210.375 kb on + strand, within OHPLBJKB_01177 at 1210.375 kb on + strand, within OHPLBJKB_01177 at 1210.376 kb on - strand, within OHPLBJKB_01177 at 1210.465 kb on + strand at 1210.472 kb on - strand at 1210.472 kb on - strand at 1210.520 kb on + strand at 1210.521 kb on - strand at 1210.536 kb on + strand at 1210.537 kb on - strand at 1210.547 kb on - strand at 1210.611 kb on + strand at 1210.621 kb on - strand at 1210.621 kb on - strand at 1210.627 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction lib only remove 1,207,826 + +0.6 1,207,826 + -0.0 1,207,827 - -1.1 1,207,930 + OHPLBJKB_01175 0.12 +0.3 1,207,930 + OHPLBJKB_01175 0.12 -0.8 1,207,963 - OHPLBJKB_01175 0.16 +0.7 1,207,964 + OHPLBJKB_01175 0.16 -0.4 1,207,964 + OHPLBJKB_01175 0.16 -0.1 1,207,965 - OHPLBJKB_01175 0.16 +0.4 1,207,965 - OHPLBJKB_01175 0.16 +1.0 1,207,965 - OHPLBJKB_01175 0.16 +0.2 1,208,020 + OHPLBJKB_01175 0.23 +1.8 1,208,021 - OHPLBJKB_01175 0.23 +0.3 1,208,021 - OHPLBJKB_01175 0.23 -1.6 1,208,051 + OHPLBJKB_01175 0.26 -0.2 1,208,066 + OHPLBJKB_01175 0.28 +0.2 1,208,066 + OHPLBJKB_01175 0.28 -0.1 1,208,067 - OHPLBJKB_01175 0.28 +0.9 1,208,067 - OHPLBJKB_01175 0.28 -0.0 1,208,080 + OHPLBJKB_01175 0.30 +0.0 1,208,080 + OHPLBJKB_01175 0.30 +0.7 1,208,080 + OHPLBJKB_01175 0.30 -0.1 1,208,081 - OHPLBJKB_01175 0.30 +0.9 1,208,081 - OHPLBJKB_01175 0.30 +0.6 1,208,084 + OHPLBJKB_01175 0.30 -1.3 1,208,084 + OHPLBJKB_01175 0.30 -0.5 1,208,123 + OHPLBJKB_01175 0.35 +0.5 1,208,124 - OHPLBJKB_01175 0.35 +0.2 1,208,124 - OHPLBJKB_01175 0.35 +0.3 1,208,158 + OHPLBJKB_01175 0.39 +0.7 1,208,158 + OHPLBJKB_01175 0.39 -1.1 1,208,158 + OHPLBJKB_01175 0.39 +0.1 1,208,158 + OHPLBJKB_01175 0.39 -0.3 1,208,158 + OHPLBJKB_01175 0.39 +0.6 1,208,158 + OHPLBJKB_01175 0.39 -0.5 1,208,158 + OHPLBJKB_01175 0.39 -1.1 1,208,158 + OHPLBJKB_01175 0.39 -0.3 1,208,159 - OHPLBJKB_01175 0.39 +1.0 1,208,211 + OHPLBJKB_01175 0.45 -0.3 1,208,245 + OHPLBJKB_01175 0.49 +0.3 1,208,245 + OHPLBJKB_01175 0.49 -0.1 1,208,286 + OHPLBJKB_01175 0.54 -1.2 1,208,352 + OHPLBJKB_01175 0.62 -0.0 1,208,352 + OHPLBJKB_01175 0.62 -0.6 1,208,368 - OHPLBJKB_01175 0.64 -0.2 1,208,368 - OHPLBJKB_01175 0.64 -0.9 1,208,368 - OHPLBJKB_01175 0.64 +1.1 1,208,409 + OHPLBJKB_01175 0.68 -0.4 1,208,409 + OHPLBJKB_01175 0.68 +0.2 1,208,410 - OHPLBJKB_01175 0.68 +1.1 1,208,576 + OHPLBJKB_01175 0.88 +0.4 1,208,576 + OHPLBJKB_01175 0.88 +0.0 1,208,576 + OHPLBJKB_01175 0.88 +0.4 1,208,576 + OHPLBJKB_01175 0.88 +0.6 1,208,577 - OHPLBJKB_01175 0.88 -0.2 1,208,577 - OHPLBJKB_01175 0.88 -0.5 1,208,577 - OHPLBJKB_01175 0.88 -0.4 1,208,605 + +1.4 1,208,610 - +1.2 1,208,638 - +0.2 1,208,702 - +0.3 1,208,702 - -0.3 1,208,712 - -0.0 1,208,749 + +0.7 1,208,765 + -0.1 1,208,766 - +0.3 1,209,705 + +0.8 1,209,757 + +0.1 1,209,964 + OHPLBJKB_01177 0.29 -0.2 1,209,965 - OHPLBJKB_01177 0.30 -1.4 1,210,163 + OHPLBJKB_01177 0.56 -0.4 1,210,205 + OHPLBJKB_01177 0.62 +0.1 1,210,205 + OHPLBJKB_01177 0.62 -0.0 1,210,206 - OHPLBJKB_01177 0.62 -0.1 1,210,304 + OHPLBJKB_01177 0.75 -0.1 1,210,375 + OHPLBJKB_01177 0.85 +0.9 1,210,375 + OHPLBJKB_01177 0.85 +0.8 1,210,376 - OHPLBJKB_01177 0.85 +0.6 1,210,465 + +0.3 1,210,472 - -0.5 1,210,472 - +1.0 1,210,520 + +0.3 1,210,521 - -1.2 1,210,536 + -1.6 1,210,537 - +0.3 1,210,547 - +0.1 1,210,611 + +0.7 1,210,621 - -0.2 1,210,621 - -0.4 1,210,627 + +0.7
Or see this region's nucleotide sequence