Experiment: BWC1S MOI10
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_01985 and OHPLBJKB_01986 overlap by 4 nucleotides OHPLBJKB_01986 and OHPLBJKB_01987 overlap by 4 nucleotides
OHPLBJKB_01985: OHPLBJKB_01985 - Arginine N-succinyltransferase, at 2,061,779 to 2,062,813
_01985
OHPLBJKB_01986: OHPLBJKB_01986 - N-succinylglutamate 5-semialdehyde dehydrogenase, at 2,062,810 to 2,064,288
_01986
OHPLBJKB_01987: OHPLBJKB_01987 - N-succinylarginine dihydrolase, at 2,064,285 to 2,065,628
_01987
Position (kb)
2062
2063
2064
2065 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2061.950 kb on + strand, within OHPLBJKB_01985 at 2061.951 kb on - strand, within OHPLBJKB_01985 at 2061.951 kb on - strand, within OHPLBJKB_01985 at 2061.971 kb on - strand, within OHPLBJKB_01985 at 2062.038 kb on - strand, within OHPLBJKB_01985 at 2062.038 kb on - strand, within OHPLBJKB_01985 at 2062.038 kb on - strand, within OHPLBJKB_01985 at 2062.044 kb on - strand, within OHPLBJKB_01985 at 2062.088 kb on + strand, within OHPLBJKB_01985 at 2062.244 kb on - strand, within OHPLBJKB_01985 at 2062.293 kb on - strand, within OHPLBJKB_01985 at 2062.385 kb on - strand, within OHPLBJKB_01985 at 2062.415 kb on + strand, within OHPLBJKB_01985 at 2062.416 kb on - strand, within OHPLBJKB_01985 at 2062.462 kb on - strand, within OHPLBJKB_01985 at 2062.523 kb on + strand, within OHPLBJKB_01985 at 2062.523 kb on + strand, within OHPLBJKB_01985 at 2062.524 kb on - strand, within OHPLBJKB_01985 at 2062.524 kb on - strand, within OHPLBJKB_01985 at 2062.524 kb on - strand, within OHPLBJKB_01985 at 2062.524 kb on - strand, within OHPLBJKB_01985 at 2062.524 kb on - strand, within OHPLBJKB_01985 at 2062.667 kb on + strand, within OHPLBJKB_01985 at 2062.667 kb on + strand, within OHPLBJKB_01985 at 2063.136 kb on + strand, within OHPLBJKB_01986 at 2063.136 kb on + strand, within OHPLBJKB_01986 at 2063.137 kb on - strand, within OHPLBJKB_01986 at 2063.239 kb on + strand, within OHPLBJKB_01986 at 2063.242 kb on - strand, within OHPLBJKB_01986 at 2063.272 kb on - strand, within OHPLBJKB_01986 at 2063.388 kb on - strand, within OHPLBJKB_01986 at 2063.657 kb on + strand, within OHPLBJKB_01986 at 2063.858 kb on + strand, within OHPLBJKB_01986 at 2063.861 kb on + strand, within OHPLBJKB_01986 at 2063.862 kb on - strand, within OHPLBJKB_01986 at 2063.862 kb on - strand, within OHPLBJKB_01986 at 2064.090 kb on + strand, within OHPLBJKB_01986 at 2064.178 kb on + strand at 2064.204 kb on + strand at 2064.302 kb on + strand at 2064.303 kb on - strand at 2064.762 kb on - strand, within OHPLBJKB_01987 at 2065.102 kb on + strand, within OHPLBJKB_01987 at 2065.187 kb on + strand, within OHPLBJKB_01987 at 2065.187 kb on + strand, within OHPLBJKB_01987 at 2065.188 kb on - strand, within OHPLBJKB_01987 at 2065.188 kb on - strand, within OHPLBJKB_01987 at 2065.191 kb on + strand, within OHPLBJKB_01987
Per-strain Table
Position Strand Gene LocusTag Fraction BWC1S MOI10 remove 2,061,950 + OHPLBJKB_01985 0.17 -1.3 2,061,951 - OHPLBJKB_01985 0.17 -1.1 2,061,951 - OHPLBJKB_01985 0.17 +0.0 2,061,971 - OHPLBJKB_01985 0.19 +0.7 2,062,038 - OHPLBJKB_01985 0.25 -1.2 2,062,038 - OHPLBJKB_01985 0.25 +2.0 2,062,038 - OHPLBJKB_01985 0.25 -1.3 2,062,044 - OHPLBJKB_01985 0.26 +1.2 2,062,088 + OHPLBJKB_01985 0.30 -1.3 2,062,244 - OHPLBJKB_01985 0.45 -1.1 2,062,293 - OHPLBJKB_01985 0.50 +0.8 2,062,385 - OHPLBJKB_01985 0.59 +0.8 2,062,415 + OHPLBJKB_01985 0.61 -2.2 2,062,416 - OHPLBJKB_01985 0.62 +0.9 2,062,462 - OHPLBJKB_01985 0.66 -0.6 2,062,523 + OHPLBJKB_01985 0.72 -1.3 2,062,523 + OHPLBJKB_01985 0.72 +1.8 2,062,524 - OHPLBJKB_01985 0.72 -0.4 2,062,524 - OHPLBJKB_01985 0.72 +0.0 2,062,524 - OHPLBJKB_01985 0.72 +0.9 2,062,524 - OHPLBJKB_01985 0.72 -0.0 2,062,524 - OHPLBJKB_01985 0.72 -1.1 2,062,667 + OHPLBJKB_01985 0.86 +0.0 2,062,667 + OHPLBJKB_01985 0.86 +1.7 2,063,136 + OHPLBJKB_01986 0.22 -2.3 2,063,136 + OHPLBJKB_01986 0.22 +0.9 2,063,137 - OHPLBJKB_01986 0.22 +1.1 2,063,239 + OHPLBJKB_01986 0.29 +0.9 2,063,242 - OHPLBJKB_01986 0.29 +1.3 2,063,272 - OHPLBJKB_01986 0.31 -1.9 2,063,388 - OHPLBJKB_01986 0.39 +1.4 2,063,657 + OHPLBJKB_01986 0.57 -0.7 2,063,858 + OHPLBJKB_01986 0.71 +1.2 2,063,861 + OHPLBJKB_01986 0.71 -1.6 2,063,862 - OHPLBJKB_01986 0.71 -0.3 2,063,862 - OHPLBJKB_01986 0.71 +0.2 2,064,090 + OHPLBJKB_01986 0.87 +1.2 2,064,178 + -1.3 2,064,204 + +1.8 2,064,302 + -0.6 2,064,303 - -1.2 2,064,762 - OHPLBJKB_01987 0.35 -1.5 2,065,102 + OHPLBJKB_01987 0.61 -0.2 2,065,187 + OHPLBJKB_01987 0.67 -0.4 2,065,187 + OHPLBJKB_01987 0.67 +1.1 2,065,188 - OHPLBJKB_01987 0.67 +0.6 2,065,188 - OHPLBJKB_01987 0.67 +0.5 2,065,191 + OHPLBJKB_01987 0.67 +0.7
Or see this region's nucleotide sequence