Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_04017

Experiment: Z3 MOI1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Z3 MOI1
4,213,522	+				-1.1
4,213,660	+		OHPLBJKB_04016	0.34	-0.2
4,213,669	+		OHPLBJKB_04016	0.36	-1.6
4,213,670	-		OHPLBJKB_04016	0.36	+0.7
4,213,702	+		OHPLBJKB_04016	0.44	-0.3
4,213,703	-		OHPLBJKB_04016	0.44	+1.1
4,213,732	+		OHPLBJKB_04016	0.51	-0.6
4,213,733	-		OHPLBJKB_04016	0.52	-0.2
4,213,741	+		OHPLBJKB_04016	0.54	-0.7
4,213,768	+		OHPLBJKB_04016	0.60	-0.4
4,213,769	-		OHPLBJKB_04016	0.60	-0.3
4,213,898	+				-1.0
4,213,898	+				-1.4
4,213,899	-				+0.6
4,213,931	+				+0.3
4,213,931	+				-0.9
4,213,931	+				-1.6
4,213,932	-				+0.3
4,213,932	-				-1.9
4,213,937	+				+1.9
4,213,966	-				+0.6
4,213,966	-				+1.0
4,213,966	-				+0.4
4,213,968	-				-1.4
4,214,004	+				+0.9
4,214,005	-				-2.3
4,214,172	-				-1.6
4,214,185	+				-1.6
4,214,185	+				-0.0
4,214,186	-				+0.7
4,214,186	-				-1.8
4,214,227	+				-0.2
4,214,264	+				-0.1
4,214,264	+				-1.4
4,214,422	+				-1.4
4,214,503	+				-1.4
4,214,504	-				+2.3
4,214,504	-				-0.4
4,214,508	+				-0.7
4,214,509	-				+0.2
4,214,509	-				+2.4
4,214,509	-				-0.8
4,214,625	+				-1.4
4,214,625	+				+0.9
4,214,625	+				+0.2
4,214,625	+				-0.0
4,214,625	+				+1.8
4,214,626	-				-1.5
4,214,626	-				+1.1
4,214,626	-				-1.6
4,214,655	+				-3.0
4,214,674	+				-0.6
4,214,675	-				+1.8
4,214,675	-				-0.1
4,214,689	-		OHPLBJKB_04017	0.10	-0.1
4,214,760	+		OHPLBJKB_04017	0.14	+0.0
4,214,779	+		OHPLBJKB_04017	0.15	-0.2
4,214,780	-		OHPLBJKB_04017	0.15	+0.7
4,214,780	-		OHPLBJKB_04017	0.15	+0.5
4,214,845	-		OHPLBJKB_04017	0.18	-2.2
4,214,898	+		OHPLBJKB_04017	0.20	+0.6
4,214,898	+		OHPLBJKB_04017	0.20	+1.1
4,214,943	+		OHPLBJKB_04017	0.23	+0.4
4,214,943	+		OHPLBJKB_04017	0.23	-1.0
4,214,943	+		OHPLBJKB_04017	0.23	-0.7
4,214,943	+		OHPLBJKB_04017	0.23	-0.0
4,214,985	+		OHPLBJKB_04017	0.25	-0.9
4,214,985	+		OHPLBJKB_04017	0.25	+0.6
4,214,995	-		OHPLBJKB_04017	0.25	-2.9
4,215,006	+		OHPLBJKB_04017	0.26	+0.9
4,215,006	+		OHPLBJKB_04017	0.26	-1.1
4,215,006	+		OHPLBJKB_04017	0.26	+0.5
4,215,007	-		OHPLBJKB_04017	0.26	+0.2
4,215,034	-		OHPLBJKB_04017	0.27	+0.6
4,215,034	-		OHPLBJKB_04017	0.27	+1.4
4,215,050	-		OHPLBJKB_04017	0.28	-1.2
4,215,050	-		OHPLBJKB_04017	0.28	+0.2
4,215,057	+		OHPLBJKB_04017	0.28	-0.2
4,215,058	-		OHPLBJKB_04017	0.28	-1.1
4,215,058	-		OHPLBJKB_04017	0.28	-0.4
4,215,058	-		OHPLBJKB_04017	0.28	-1.4
4,215,075	+		OHPLBJKB_04017	0.29	-0.2
4,215,104	+		OHPLBJKB_04017	0.30	+0.2
4,215,133	-		OHPLBJKB_04017	0.32	-2.6
4,215,136	+		OHPLBJKB_04017	0.32	-2.3
4,215,137	-		OHPLBJKB_04017	0.32	+1.5
4,215,137	-		OHPLBJKB_04017	0.32	-1.8
4,215,147	+		OHPLBJKB_04017	0.32	-1.1
4,215,147	+		OHPLBJKB_04017	0.32	+0.7
4,215,148	-		OHPLBJKB_04017	0.32	+1.1
4,215,237	+		OHPLBJKB_04017	0.37	+0.4
4,215,237	+		OHPLBJKB_04017	0.37	-0.6
4,215,238	-		OHPLBJKB_04017	0.37	-0.4
4,215,243	+		OHPLBJKB_04017	0.37	-1.4
4,215,244	-		OHPLBJKB_04017	0.37	+0.1
4,215,319	-		OHPLBJKB_04017	0.40	+0.4
4,215,319	-		OHPLBJKB_04017	0.40	-2.1
4,215,555	+		OHPLBJKB_04017	0.52	-0.4
4,215,579	+		OHPLBJKB_04017	0.53	+0.8
4,215,579	+		OHPLBJKB_04017	0.53	-1.6
4,215,579	+		OHPLBJKB_04017	0.53	-0.1
4,215,579	+		OHPLBJKB_04017	0.53	-0.2
4,215,579	+		OHPLBJKB_04017	0.53	-0.4
4,215,580	-		OHPLBJKB_04017	0.53	-0.8
4,215,580	-		OHPLBJKB_04017	0.53	-1.1
4,215,580	-		OHPLBJKB_04017	0.53	+0.5
4,215,580	-		OHPLBJKB_04017	0.53	-1.4
4,215,580	-		OHPLBJKB_04017	0.53	-2.6
4,215,580	-		OHPLBJKB_04017	0.53	+0.9
4,215,630	+		OHPLBJKB_04017	0.55	-0.4
4,215,630	+		OHPLBJKB_04017	0.55	+1.0
4,215,645	-		OHPLBJKB_04017	0.56	-0.0
4,215,700	-		OHPLBJKB_04017	0.59	-2.0
4,215,723	+		OHPLBJKB_04017	0.60	+0.4
4,215,723	+		OHPLBJKB_04017	0.60	-0.1
4,215,723	+		OHPLBJKB_04017	0.60	-1.8
4,215,723	+		OHPLBJKB_04017	0.60	-1.4
4,215,724	-		OHPLBJKB_04017	0.60	-0.9
4,215,792	+		OHPLBJKB_04017	0.63	-3.2
4,215,792	+		OHPLBJKB_04017	0.63	-0.6
4,215,792	+		OHPLBJKB_04017	0.63	+0.7
4,215,793	-		OHPLBJKB_04017	0.63	-1.0
4,215,793	-		OHPLBJKB_04017	0.63	+0.7
4,215,796	+		OHPLBJKB_04017	0.63	+1.1
4,215,796	+		OHPLBJKB_04017	0.63	+1.0
4,215,796	+		OHPLBJKB_04017	0.63	-2.1
4,215,796	+		OHPLBJKB_04017	0.63	-2.0
4,215,797	-		OHPLBJKB_04017	0.63	+0.6
4,215,850	+		OHPLBJKB_04017	0.66	+1.2
4,215,851	-		OHPLBJKB_04017	0.66	-1.0
4,215,889	-		OHPLBJKB_04017	0.68	-0.2
4,215,889	-		OHPLBJKB_04017	0.68	-1.3
4,215,893	-		OHPLBJKB_04017	0.68	+0.0
4,215,904	-		OHPLBJKB_04017	0.68	-0.2
4,215,904	-		OHPLBJKB_04017	0.68	+0.4
4,216,014	+		OHPLBJKB_04017	0.74	+0.0
4,216,014	+		OHPLBJKB_04017	0.74	+1.4
4,216,014	+		OHPLBJKB_04017	0.74	-2.0
4,216,014	+		OHPLBJKB_04017	0.74	-0.0
4,216,015	-		OHPLBJKB_04017	0.74	+0.3
4,216,015	-		OHPLBJKB_04017	0.74	+0.3
4,216,035	+		OHPLBJKB_04017	0.75	-1.5
4,216,035	+		OHPLBJKB_04017	0.75	-1.4
4,216,035	+		OHPLBJKB_04017	0.75	+1.1
4,216,035	+		OHPLBJKB_04017	0.75	+0.8
4,216,036	-		OHPLBJKB_04017	0.75	+0.7
4,216,036	-		OHPLBJKB_04017	0.75	-1.7
4,216,111	+		OHPLBJKB_04017	0.78	+0.7
4,216,149	+		OHPLBJKB_04017	0.80	-1.0
4,216,150	-		OHPLBJKB_04017	0.80	-0.8
4,216,216	-		OHPLBJKB_04017	0.83	+1.6
4,216,255	+		OHPLBJKB_04017	0.85	-0.4
4,216,255	+		OHPLBJKB_04017	0.85	-1.7
4,216,261	+		OHPLBJKB_04017	0.85	+1.2
4,216,262	-		OHPLBJKB_04017	0.85	-0.4
4,216,263	+		OHPLBJKB_04017	0.85	+1.0
4,216,263	+		OHPLBJKB_04017	0.85	-2.1
4,216,263	+		OHPLBJKB_04017	0.85	-1.4
4,216,264	-		OHPLBJKB_04017	0.86	-1.8
4,216,264	-		OHPLBJKB_04017	0.86	-1.5
4,216,323	+		OHPLBJKB_04017	0.88	+0.8
4,216,324	-		OHPLBJKB_04017	0.88	-0.7
4,216,371	+				-0.4
4,216,380	+				+0.1
4,216,429	+				-0.6
4,216,448	+				-0.9
4,216,449	-				-1.2
4,216,449	-				-0.3
4,216,457	+				+0.7
4,216,458	-				-0.5
4,216,500	+				-0.5
4,216,526	-				-1.8
4,216,542	-				-0.0
4,216,542	-				-0.2
4,216,546	+				+1.5
4,216,547	-				+0.9
4,216,658	+		OHPLBJKB_04018	0.12	-1.3
4,216,658	+		OHPLBJKB_04018	0.12	-1.9
4,216,658	+		OHPLBJKB_04018	0.12	+0.0
4,216,659	-		OHPLBJKB_04018	0.12	-0.7
4,216,659	-		OHPLBJKB_04018	0.12	-0.5
4,216,659	-		OHPLBJKB_04018	0.12	-0.0
4,216,659	-		OHPLBJKB_04018	0.12	-0.9
4,216,662	+		OHPLBJKB_04018	0.13	+0.5
4,216,663	-		OHPLBJKB_04018	0.13	+1.4
4,216,663	-		OHPLBJKB_04018	0.13	-1.0
4,216,663	-		OHPLBJKB_04018	0.13	+1.8
4,216,663	-		OHPLBJKB_04018	0.13	+0.5
4,216,684	+		OHPLBJKB_04018	0.16	+1.3
4,216,685	-		OHPLBJKB_04018	0.16	-1.1
4,216,755	-		OHPLBJKB_04018	0.25	-1.0
4,216,796	+		OHPLBJKB_04018	0.31	-0.6
4,216,796	+		OHPLBJKB_04018	0.31	+0.2
4,216,797	-		OHPLBJKB_04018	0.31	+0.4
4,216,797	-		OHPLBJKB_04018	0.31	-0.2
4,216,797	-		OHPLBJKB_04018	0.31	-0.9
4,216,848	+		OHPLBJKB_04018	0.38	+1.6
4,216,972	-		OHPLBJKB_04018	0.55	-1.1
4,217,005	+		OHPLBJKB_04018	0.59	-1.3
4,217,176	+		OHPLBJKB_04018	0.83	-1.1
4,217,176	+		OHPLBJKB_04018	0.83	-1.1
4,217,176	+		OHPLBJKB_04018	0.83	+1.1
4,217,177	-		OHPLBJKB_04018	0.83	+1.1
4,217,298	+				-2.3
4,217,299	-				-1.1
4,217,527	+		OHPLBJKB_04019	0.35	-1.3
4,217,532	+		OHPLBJKB_04019	0.36	+1.1
4,217,532	+		OHPLBJKB_04019	0.36	+2.2
4,217,533	-		OHPLBJKB_04019	0.36	-1.9