Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_01090

Experiment: Z3 MOI1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Z3 MOI1
1,115,432	+				-0.2
1,115,453	+				+1.0
1,115,454	-				-0.9
1,115,498	-				-2.3
1,115,523	+				-0.6
1,115,524	-				+0.3
1,115,524	-				+1.4
1,115,528	+				+0.6
1,115,529	-				+2.7
1,115,529	-				+2.5
1,115,589	+				+0.5
1,115,592	+				-1.6
1,115,592	+				-2.3
1,115,593	-				+1.3
1,115,593	-				-0.2
1,115,593	-				-1.0
1,115,675	+		OHPLBJKB_01088	0.19	+0.0
1,116,047	+				+0.6
1,116,047	+				+0.0
1,116,059	+				-0.2
1,116,060	-				+0.3
1,116,060	-				-0.6
1,116,060	-				-0.4
1,116,149	+		OHPLBJKB_01089	0.34	-1.3
1,116,150	-		OHPLBJKB_01089	0.34	+1.9
1,116,150	-		OHPLBJKB_01089	0.34	+0.3
1,116,150	-		OHPLBJKB_01089	0.34	+0.8
1,116,150	-		OHPLBJKB_01089	0.34	-1.6
1,116,193	+		OHPLBJKB_01089	0.49	+0.0
1,116,216	+		OHPLBJKB_01089	0.57	+2.8
1,116,216	+		OHPLBJKB_01089	0.57	-2.0
1,116,216	+		OHPLBJKB_01089	0.57	+0.1
1,116,216	+		OHPLBJKB_01089	0.57	-1.1
1,116,216	+		OHPLBJKB_01089	0.57	-1.2
1,116,217	-		OHPLBJKB_01089	0.57	-1.0
1,116,217	-		OHPLBJKB_01089	0.57	+0.8
1,116,217	-		OHPLBJKB_01089	0.57	-0.8
1,116,235	+		OHPLBJKB_01089	0.63	-0.7
1,116,273	+		OHPLBJKB_01089	0.76	-1.3
1,116,274	-		OHPLBJKB_01089	0.77	+0.3
1,116,339	+				+1.5
1,116,339	+				+0.1
1,116,340	-				-0.5
1,116,398	+				+0.1
1,116,401	+				-0.4
1,116,402	-				+2.0
1,116,402	-				+2.1
1,116,404	+				-0.5
1,116,404	+				+1.7
1,116,404	+				+2.5
1,116,404	+				-0.5
1,116,404	+				-0.2
1,116,405	-				+1.8
1,116,405	-				-1.0
1,116,405	-				-0.1
1,116,405	-				-0.8
1,116,405	-				-2.4
1,116,405	-				-1.5
1,116,405	-				+1.1
1,116,405	-				+0.4
1,116,409	-				-0.4
1,116,430	-				+2.2
1,116,435	+				-0.3
1,116,453	+		OHPLBJKB_01090	0.15	+0.4
1,116,488	-		OHPLBJKB_01090	0.25	-0.5
1,116,521	+		OHPLBJKB_01090	0.35	+1.0
1,116,521	+		OHPLBJKB_01090	0.35	+1.7
1,116,521	+		OHPLBJKB_01090	0.35	-1.0
1,116,521	+		OHPLBJKB_01090	0.35	+1.0
1,116,521	+		OHPLBJKB_01090	0.35	-1.8
1,116,521	+		OHPLBJKB_01090	0.35	-0.2
1,116,521	+		OHPLBJKB_01090	0.35	-0.7
1,116,521	+		OHPLBJKB_01090	0.35	-1.8
1,116,522	-		OHPLBJKB_01090	0.35	+1.9
1,116,522	-		OHPLBJKB_01090	0.35	-1.6
1,116,522	-		OHPLBJKB_01090	0.35	+0.4
1,116,522	-		OHPLBJKB_01090	0.35	-1.3
1,116,522	-		OHPLBJKB_01090	0.35	+0.9
1,116,522	-		OHPLBJKB_01090	0.35	+0.0
1,116,607	+		OHPLBJKB_01090	0.60	-1.0
1,116,608	-		OHPLBJKB_01090	0.60	+1.2
1,116,616	+		OHPLBJKB_01090	0.62	-0.5
1,116,635	+		OHPLBJKB_01090	0.68	-0.9
1,116,635	+		OHPLBJKB_01090	0.68	+1.4
1,116,635	+		OHPLBJKB_01090	0.68	-1.9
1,116,636	-		OHPLBJKB_01090	0.68	-1.3
1,116,636	-		OHPLBJKB_01090	0.68	+3.3
1,116,706	+		OHPLBJKB_01090	0.89	-0.6
1,116,707	-		OHPLBJKB_01090	0.89	+0.4
1,116,707	-		OHPLBJKB_01090	0.89	-2.4
1,116,707	-		OHPLBJKB_01090	0.89	+0.5
1,116,709	+		OHPLBJKB_01090	0.89	+1.2
1,116,710	-				+0.0
1,116,735	+				-0.5
1,116,735	+				+0.1
1,116,745	-				-1.6
1,116,777	-				-0.9
1,116,777	-				-1.5
1,116,777	-				+0.8
1,116,777	-				+0.9
1,116,791	+				+0.3
1,116,791	+				+0.3
1,116,792	-				-0.5
1,116,792	-				+0.8
1,116,792	-				+2.3
1,116,792	-				+0.6
1,116,792	-				+1.6
1,116,794	+				-0.4
1,116,795	-				+1.5
1,116,795	-				-0.4
1,116,805	+				-2.0
1,116,805	+				-0.3
1,116,806	-				-1.3
1,116,808	+				-0.9
1,116,809	-				-1.2
1,116,809	-				+1.7
1,116,809	-				-1.6
1,116,809	-				+0.7
1,116,809	-				+1.0
1,116,825	+				+0.6
1,116,849	-				-2.6
1,116,866	-				-3.0
1,116,866	-				-0.6
1,116,928	+				-0.1
1,116,928	+				+1.7
1,116,928	+				+0.7
1,116,929	-				-0.4
1,116,929	-				-0.0
1,116,929	-				-0.1
1,116,929	-				+0.1
1,116,929	-				-0.9
1,116,931	+				-0.2
1,116,931	+				-1.0
1,116,931	+				+1.9
1,116,931	+				-2.5
1,116,931	+				+2.9
1,116,932	-				+1.1
1,116,932	-				-2.0
1,116,932	-				+2.3
1,116,974	+				+0.4
1,116,974	+				+0.0
1,117,003	+				-0.6
1,117,003	+				+1.4
1,117,004	-				+2.4
1,117,047	+				-0.2
1,117,048	-				-2.2
1,117,087	+		OHPLBJKB_01091	0.12	-0.6
1,117,087	+		OHPLBJKB_01091	0.12	+0.4
1,117,166	+		OHPLBJKB_01091	0.16	+1.1
1,117,166	+		OHPLBJKB_01091	0.16	-0.4
1,117,276	+		OHPLBJKB_01091	0.23	+0.1
1,117,364	-		OHPLBJKB_01091	0.28	+2.4
1,117,364	-		OHPLBJKB_01091	0.28	-2.0
1,117,364	-		OHPLBJKB_01091	0.28	-0.4
1,117,408	+		OHPLBJKB_01091	0.31	+0.1
1,117,408	+		OHPLBJKB_01091	0.31	-0.8
1,117,408	+		OHPLBJKB_01091	0.31	+1.4
1,117,408	+		OHPLBJKB_01091	0.31	-1.3
1,117,408	+		OHPLBJKB_01091	0.31	-0.8
1,117,408	+		OHPLBJKB_01091	0.31	-2.4
1,117,408	+		OHPLBJKB_01091	0.31	+0.2
1,117,408	+		OHPLBJKB_01091	0.31	+0.9
1,117,409	-		OHPLBJKB_01091	0.31	+0.0
1,117,409	-		OHPLBJKB_01091	0.31	+2.5
1,117,409	-		OHPLBJKB_01091	0.31	-0.1
1,117,409	-		OHPLBJKB_01091	0.31	+1.7
1,117,409	-		OHPLBJKB_01091	0.31	-0.2
1,117,463	+		OHPLBJKB_01091	0.34	-2.0
1,117,463	+		OHPLBJKB_01091	0.34	+0.0
1,117,464	-		OHPLBJKB_01091	0.34	-1.5
1,117,464	-		OHPLBJKB_01091	0.34	+1.9
1,117,578	+		OHPLBJKB_01091	0.41	+0.7
1,117,578	+		OHPLBJKB_01091	0.41	+0.2
1,117,581	+		OHPLBJKB_01091	0.41	+1.0
1,117,581	+		OHPLBJKB_01091	0.41	+0.1
1,117,581	+		OHPLBJKB_01091	0.41	-0.5
1,117,581	+		OHPLBJKB_01091	0.41	-1.4
1,117,582	-		OHPLBJKB_01091	0.41	-1.4
1,117,582	-		OHPLBJKB_01091	0.41	-0.6
1,117,582	-		OHPLBJKB_01091	0.41	-0.7
1,117,582	-		OHPLBJKB_01091	0.41	-0.4
1,117,582	-		OHPLBJKB_01091	0.41	-2.3
1,117,582	-		OHPLBJKB_01091	0.41	-1.8
1,117,582	-		OHPLBJKB_01091	0.41	+2.0
1,117,615	+		OHPLBJKB_01091	0.43	+1.0
1,117,616	-		OHPLBJKB_01091	0.44	-0.1
1,117,616	-		OHPLBJKB_01091	0.44	-2.1
1,117,616	-		OHPLBJKB_01091	0.44	-0.3
1,117,661	+		OHPLBJKB_01091	0.46	-0.7
1,117,662	-		OHPLBJKB_01091	0.46	+0.7
1,117,662	-		OHPLBJKB_01091	0.46	-1.0
1,117,696	-		OHPLBJKB_01091	0.48	+0.4
1,117,696	-		OHPLBJKB_01091	0.48	+1.6
1,117,735	+		OHPLBJKB_01091	0.51	-1.3
1,117,735	+		OHPLBJKB_01091	0.51	-0.6
1,117,736	-		OHPLBJKB_01091	0.51	-1.6