Experiment: Z3 MOI1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_00569 and OHPLBJKB_00570 are separated by 10 nucleotides OHPLBJKB_00570 and OHPLBJKB_00571 are separated by 22 nucleotides OHPLBJKB_00571 and OHPLBJKB_00572 are separated by 248 nucleotides
OHPLBJKB_00569: OHPLBJKB_00569 - N-acetylgalactosamine permease IIC component 1, at 580,801 to 581,580
_00569
OHPLBJKB_00570: OHPLBJKB_00570 - PTS system fructose-specific EIIB component, at 581,591 to 582,064
_00570
OHPLBJKB_00571: OHPLBJKB_00571 - D-tagatose-1,6-bisphosphate aldolase subunit KbaZ, at 582,087 to 583,367
_00571
OHPLBJKB_00572: OHPLBJKB_00572 - Glucitol operon repressor, at 583,616 to 584,425
_00572
Position (kb) 582
583
584 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7
8 at 581.102 kb on + strand, within OHPLBJKB_00569 at 581.102 kb on + strand, within OHPLBJKB_00569 at 581.102 kb on + strand, within OHPLBJKB_00569 at 581.103 kb on - strand, within OHPLBJKB_00569 at 581.103 kb on - strand, within OHPLBJKB_00569 at 581.103 kb on - strand, within OHPLBJKB_00569 at 581.103 kb on - strand, within OHPLBJKB_00569 at 581.103 kb on - strand, within OHPLBJKB_00569 at 581.159 kb on + strand, within OHPLBJKB_00569 at 581.159 kb on + strand, within OHPLBJKB_00569 at 581.160 kb on - strand, within OHPLBJKB_00569 at 581.185 kb on - strand, within OHPLBJKB_00569 at 581.251 kb on - strand, within OHPLBJKB_00569 at 581.251 kb on - strand, within OHPLBJKB_00569 at 581.251 kb on - strand, within OHPLBJKB_00569 at 581.294 kb on - strand, within OHPLBJKB_00569 at 581.323 kb on - strand, within OHPLBJKB_00569 at 581.323 kb on - strand, within OHPLBJKB_00569 at 581.346 kb on + strand, within OHPLBJKB_00569 at 581.346 kb on + strand, within OHPLBJKB_00569 at 581.364 kb on + strand, within OHPLBJKB_00569 at 581.455 kb on + strand, within OHPLBJKB_00569 at 581.455 kb on + strand, within OHPLBJKB_00569 at 581.496 kb on + strand, within OHPLBJKB_00569 at 581.496 kb on + strand, within OHPLBJKB_00569 at 581.496 kb on + strand, within OHPLBJKB_00569 at 581.496 kb on + strand, within OHPLBJKB_00569 at 581.496 kb on + strand, within OHPLBJKB_00569 at 581.496 kb on + strand, within OHPLBJKB_00569 at 581.496 kb on + strand, within OHPLBJKB_00569 at 581.496 kb on + strand, within OHPLBJKB_00569 at 581.496 kb on + strand, within OHPLBJKB_00569 at 581.497 kb on - strand, within OHPLBJKB_00569 at 581.497 kb on - strand, within OHPLBJKB_00569 at 581.497 kb on - strand, within OHPLBJKB_00569 at 581.497 kb on - strand, within OHPLBJKB_00569 at 581.497 kb on - strand, within OHPLBJKB_00569 at 581.497 kb on - strand, within OHPLBJKB_00569 at 581.497 kb on - strand, within OHPLBJKB_00569 at 581.497 kb on - strand, within OHPLBJKB_00569 at 581.497 kb on - strand, within OHPLBJKB_00569 at 581.497 kb on - strand, within OHPLBJKB_00569 at 581.497 kb on - strand, within OHPLBJKB_00569 at 581.497 kb on - strand, within OHPLBJKB_00569 at 581.518 kb on - strand at 581.533 kb on - strand at 581.598 kb on - strand at 581.602 kb on + strand at 581.746 kb on + strand, within OHPLBJKB_00570 at 581.816 kb on - strand, within OHPLBJKB_00570 at 581.912 kb on + strand, within OHPLBJKB_00570 at 582.056 kb on - strand at 582.056 kb on - strand at 582.065 kb on - strand at 582.089 kb on - strand at 582.134 kb on + strand at 582.134 kb on + strand at 582.135 kb on - strand at 582.135 kb on - strand at 582.135 kb on - strand at 582.135 kb on - strand at 582.209 kb on - strand at 582.251 kb on + strand, within OHPLBJKB_00571 at 582.251 kb on + strand, within OHPLBJKB_00571 at 582.251 kb on + strand, within OHPLBJKB_00571 at 582.252 kb on - strand, within OHPLBJKB_00571 at 582.252 kb on - strand, within OHPLBJKB_00571 at 582.299 kb on - strand, within OHPLBJKB_00571 at 582.319 kb on + strand, within OHPLBJKB_00571 at 582.319 kb on + strand, within OHPLBJKB_00571 at 582.319 kb on + strand, within OHPLBJKB_00571 at 582.320 kb on - strand, within OHPLBJKB_00571 at 582.323 kb on + strand, within OHPLBJKB_00571 at 582.323 kb on + strand, within OHPLBJKB_00571 at 582.323 kb on + strand, within OHPLBJKB_00571 at 582.323 kb on + strand, within OHPLBJKB_00571 at 582.323 kb on + strand, within OHPLBJKB_00571 at 582.323 kb on + strand, within OHPLBJKB_00571 at 582.324 kb on - strand, within OHPLBJKB_00571 at 582.324 kb on - strand, within OHPLBJKB_00571 at 582.324 kb on - strand, within OHPLBJKB_00571 at 582.324 kb on - strand, within OHPLBJKB_00571 at 582.324 kb on - strand, within OHPLBJKB_00571 at 582.324 kb on - strand, within OHPLBJKB_00571 at 582.324 kb on - strand, within OHPLBJKB_00571 at 582.324 kb on - strand, within OHPLBJKB_00571 at 582.324 kb on - strand, within OHPLBJKB_00571 at 582.326 kb on - strand, within OHPLBJKB_00571 at 582.628 kb on - strand, within OHPLBJKB_00571 at 582.810 kb on + strand, within OHPLBJKB_00571 at 582.859 kb on + strand, within OHPLBJKB_00571 at 582.859 kb on + strand, within OHPLBJKB_00571 at 582.860 kb on - strand, within OHPLBJKB_00571 at 582.860 kb on - strand, within OHPLBJKB_00571 at 582.860 kb on - strand, within OHPLBJKB_00571 at 582.860 kb on - strand, within OHPLBJKB_00571 at 582.860 kb on - strand, within OHPLBJKB_00571 at 583.021 kb on + strand, within OHPLBJKB_00571 at 583.191 kb on - strand, within OHPLBJKB_00571 at 583.192 kb on + strand, within OHPLBJKB_00571 at 583.193 kb on - strand, within OHPLBJKB_00571 at 583.210 kb on - strand, within OHPLBJKB_00571 at 583.356 kb on + strand at 583.518 kb on - strand at 583.518 kb on - strand at 583.518 kb on - strand at 583.558 kb on + strand at 583.559 kb on - strand at 583.613 kb on - strand at 583.613 kb on - strand at 583.613 kb on - strand at 583.615 kb on + strand at 583.615 kb on + strand at 583.616 kb on - strand at 583.622 kb on - strand at 583.736 kb on + strand, within OHPLBJKB_00572 at 583.736 kb on + strand, within OHPLBJKB_00572 at 583.737 kb on - strand, within OHPLBJKB_00572 at 583.737 kb on - strand, within OHPLBJKB_00572 at 583.737 kb on - strand, within OHPLBJKB_00572 at 583.743 kb on + strand, within OHPLBJKB_00572 at 583.744 kb on - strand, within OHPLBJKB_00572 at 583.747 kb on + strand, within OHPLBJKB_00572 at 583.747 kb on + strand, within OHPLBJKB_00572 at 583.748 kb on - strand, within OHPLBJKB_00572 at 583.748 kb on - strand, within OHPLBJKB_00572 at 583.748 kb on - strand, within OHPLBJKB_00572 at 583.748 kb on - strand, within OHPLBJKB_00572 at 583.808 kb on + strand, within OHPLBJKB_00572 at 583.809 kb on - strand, within OHPLBJKB_00572 at 583.867 kb on + strand, within OHPLBJKB_00572 at 584.007 kb on + strand, within OHPLBJKB_00572 at 584.008 kb on - strand, within OHPLBJKB_00572 at 584.008 kb on - strand, within OHPLBJKB_00572 at 584.115 kb on - strand, within OHPLBJKB_00572 at 584.175 kb on + strand, within OHPLBJKB_00572 at 584.176 kb on - strand, within OHPLBJKB_00572 at 584.213 kb on - strand, within OHPLBJKB_00572 at 584.287 kb on + strand, within OHPLBJKB_00572 at 584.307 kb on + strand, within OHPLBJKB_00572 at 584.307 kb on + strand, within OHPLBJKB_00572 at 584.308 kb on - strand, within OHPLBJKB_00572 at 584.311 kb on + strand, within OHPLBJKB_00572 at 584.311 kb on + strand, within OHPLBJKB_00572 at 584.311 kb on + strand, within OHPLBJKB_00572
Per-strain Table
Position Strand Gene LocusTag Fraction Z3 MOI1 remove 581,102 + OHPLBJKB_00569 0.39 +0.5 581,102 + OHPLBJKB_00569 0.39 -0.5 581,102 + OHPLBJKB_00569 0.39 +0.7 581,103 - OHPLBJKB_00569 0.39 -0.1 581,103 - OHPLBJKB_00569 0.39 +0.8 581,103 - OHPLBJKB_00569 0.39 -1.3 581,103 - OHPLBJKB_00569 0.39 +0.5 581,103 - OHPLBJKB_00569 0.39 -0.4 581,159 + OHPLBJKB_00569 0.46 +1.0 581,159 + OHPLBJKB_00569 0.46 -2.2 581,160 - OHPLBJKB_00569 0.46 +1.2 581,185 - OHPLBJKB_00569 0.49 +1.0 581,251 - OHPLBJKB_00569 0.58 +0.0 581,251 - OHPLBJKB_00569 0.58 +0.1 581,251 - OHPLBJKB_00569 0.58 +1.2 581,294 - OHPLBJKB_00569 0.63 -1.8 581,323 - OHPLBJKB_00569 0.67 +0.4 581,323 - OHPLBJKB_00569 0.67 -1.5 581,346 + OHPLBJKB_00569 0.70 -0.4 581,346 + OHPLBJKB_00569 0.70 -1.8 581,364 + OHPLBJKB_00569 0.72 -1.8 581,455 + OHPLBJKB_00569 0.84 +1.0 581,455 + OHPLBJKB_00569 0.84 -1.6 581,496 + OHPLBJKB_00569 0.89 -2.6 581,496 + OHPLBJKB_00569 0.89 +0.7 581,496 + OHPLBJKB_00569 0.89 +1.8 581,496 + OHPLBJKB_00569 0.89 -0.6 581,496 + OHPLBJKB_00569 0.89 -1.9 581,496 + OHPLBJKB_00569 0.89 -1.0 581,496 + OHPLBJKB_00569 0.89 -1.5 581,496 + OHPLBJKB_00569 0.89 -0.5 581,496 + OHPLBJKB_00569 0.89 +0.3 581,497 - OHPLBJKB_00569 0.89 -0.1 581,497 - OHPLBJKB_00569 0.89 +0.5 581,497 - OHPLBJKB_00569 0.89 +0.9 581,497 - OHPLBJKB_00569 0.89 -1.2 581,497 - OHPLBJKB_00569 0.89 -0.7 581,497 - OHPLBJKB_00569 0.89 -1.0 581,497 - OHPLBJKB_00569 0.89 -1.5 581,497 - OHPLBJKB_00569 0.89 -0.5 581,497 - OHPLBJKB_00569 0.89 +1.7 581,497 - OHPLBJKB_00569 0.89 +1.2 581,497 - OHPLBJKB_00569 0.89 +1.9 581,497 - OHPLBJKB_00569 0.89 -1.7 581,518 - -0.6 581,533 - -0.9 581,598 - -2.7 581,602 + +0.8 581,746 + OHPLBJKB_00570 0.33 +0.5 581,816 - OHPLBJKB_00570 0.47 -0.3 581,912 + OHPLBJKB_00570 0.68 -1.2 582,056 - -1.5 582,056 - -0.6 582,065 - +0.2 582,089 - -1.4 582,134 + +1.3 582,134 + +1.3 582,135 - -0.7 582,135 - -2.3 582,135 - +1.1 582,135 - -0.4 582,209 - -0.3 582,251 + OHPLBJKB_00571 0.13 -1.5 582,251 + OHPLBJKB_00571 0.13 -2.7 582,251 + OHPLBJKB_00571 0.13 +1.4 582,252 - OHPLBJKB_00571 0.13 -0.5 582,252 - OHPLBJKB_00571 0.13 +1.9 582,299 - OHPLBJKB_00571 0.17 +1.6 582,319 + OHPLBJKB_00571 0.18 +2.1 582,319 + OHPLBJKB_00571 0.18 -0.1 582,319 + OHPLBJKB_00571 0.18 +1.7 582,320 - OHPLBJKB_00571 0.18 +1.7 582,323 + OHPLBJKB_00571 0.18 -1.8 582,323 + OHPLBJKB_00571 0.18 +1.8 582,323 + OHPLBJKB_00571 0.18 +1.0 582,323 + OHPLBJKB_00571 0.18 -0.6 582,323 + OHPLBJKB_00571 0.18 -0.8 582,323 + OHPLBJKB_00571 0.18 -0.5 582,324 - OHPLBJKB_00571 0.19 -1.2 582,324 - OHPLBJKB_00571 0.19 +0.3 582,324 - OHPLBJKB_00571 0.19 -1.0 582,324 - OHPLBJKB_00571 0.19 +0.7 582,324 - OHPLBJKB_00571 0.19 +1.7 582,324 - OHPLBJKB_00571 0.19 -1.7 582,324 - OHPLBJKB_00571 0.19 +1.5 582,324 - OHPLBJKB_00571 0.19 -0.3 582,324 - OHPLBJKB_00571 0.19 +1.9 582,326 - OHPLBJKB_00571 0.19 +3.2 582,628 - OHPLBJKB_00571 0.42 +8.5 582,810 + OHPLBJKB_00571 0.56 -2.7 582,859 + OHPLBJKB_00571 0.60 +0.1 582,859 + OHPLBJKB_00571 0.60 +1.4 582,860 - OHPLBJKB_00571 0.60 +1.3 582,860 - OHPLBJKB_00571 0.60 +0.3 582,860 - OHPLBJKB_00571 0.60 -2.8 582,860 - OHPLBJKB_00571 0.60 +1.3 582,860 - OHPLBJKB_00571 0.60 +0.1 583,021 + OHPLBJKB_00571 0.73 +1.4 583,191 - OHPLBJKB_00571 0.86 +2.5 583,192 + OHPLBJKB_00571 0.86 -1.5 583,193 - OHPLBJKB_00571 0.86 +0.5 583,210 - OHPLBJKB_00571 0.88 -1.7 583,356 + -0.2 583,518 - -2.8 583,518 - +0.3 583,518 - -0.9 583,558 + -0.5 583,559 - +0.4 583,613 - -1.0 583,613 - -2.3 583,613 - -0.3 583,615 + +0.6 583,615 + -0.1 583,616 - -2.0 583,622 - +1.5 583,736 + OHPLBJKB_00572 0.15 -0.5 583,736 + OHPLBJKB_00572 0.15 +0.5 583,737 - OHPLBJKB_00572 0.15 +1.1 583,737 - OHPLBJKB_00572 0.15 -0.3 583,737 - OHPLBJKB_00572 0.15 +1.4 583,743 + OHPLBJKB_00572 0.16 +2.0 583,744 - OHPLBJKB_00572 0.16 +0.2 583,747 + OHPLBJKB_00572 0.16 -0.1 583,747 + OHPLBJKB_00572 0.16 +0.6 583,748 - OHPLBJKB_00572 0.16 -0.3 583,748 - OHPLBJKB_00572 0.16 +7.4 583,748 - OHPLBJKB_00572 0.16 -1.8 583,748 - OHPLBJKB_00572 0.16 -1.8 583,808 + OHPLBJKB_00572 0.24 -0.6 583,809 - OHPLBJKB_00572 0.24 -1.5 583,867 + OHPLBJKB_00572 0.31 -1.3 584,007 + OHPLBJKB_00572 0.48 -0.5 584,008 - OHPLBJKB_00572 0.48 -1.0 584,008 - OHPLBJKB_00572 0.48 -0.7 584,115 - OHPLBJKB_00572 0.62 +2.7 584,175 + OHPLBJKB_00572 0.69 +0.3 584,176 - OHPLBJKB_00572 0.69 -0.1 584,213 - OHPLBJKB_00572 0.74 +0.2 584,287 + OHPLBJKB_00572 0.83 +0.5 584,307 + OHPLBJKB_00572 0.85 -1.6 584,307 + OHPLBJKB_00572 0.85 +0.4 584,308 - OHPLBJKB_00572 0.85 +0.3 584,311 + OHPLBJKB_00572 0.86 -1.4 584,311 + OHPLBJKB_00572 0.86 -1.9 584,311 + OHPLBJKB_00572 0.86 +0.7
Or see this region's nucleotide sequence