Experiment: BWC1S MOI1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02689 and OHPLBJKB_02690 overlap by 4 nucleotides OHPLBJKB_02690 and OHPLBJKB_02691 overlap by 4 nucleotides OHPLBJKB_02691 and OHPLBJKB_02692 overlap by 4 nucleotides OHPLBJKB_02692 and OHPLBJKB_02693 are separated by 18 nucleotides
OHPLBJKB_02689: OHPLBJKB_02689 - hypothetical protein, at 2,803,419 to 2,804,276
_02689
OHPLBJKB_02690: OHPLBJKB_02690 - Hydrogenase-1 operon protein HyaE, at 2,804,273 to 2,804,671
_02690
OHPLBJKB_02691: OHPLBJKB_02691 - Hydrogenase 1 maturation protease, at 2,804,668 to 2,805,255
_02691
OHPLBJKB_02692: OHPLBJKB_02692 - putative Ni/Fe-hydrogenase 1 B-type cytochrome subunit, at 2,805,252 to 2,805,959
_02692
OHPLBJKB_02693: OHPLBJKB_02693 - Hydrogenase-1 large chain, at 2,805,978 to 2,807,771
_02693
Position (kb)
2805
2806 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2804.322 kb on - strand, within OHPLBJKB_02690 at 2804.322 kb on - strand, within OHPLBJKB_02690 at 2804.384 kb on + strand, within OHPLBJKB_02690 at 2804.385 kb on - strand, within OHPLBJKB_02690 at 2804.467 kb on + strand, within OHPLBJKB_02690 at 2804.467 kb on + strand, within OHPLBJKB_02690 at 2804.467 kb on + strand, within OHPLBJKB_02690 at 2804.467 kb on + strand, within OHPLBJKB_02690 at 2804.467 kb on + strand, within OHPLBJKB_02690 at 2804.467 kb on + strand, within OHPLBJKB_02690 at 2804.467 kb on + strand, within OHPLBJKB_02690 at 2804.467 kb on + strand, within OHPLBJKB_02690 at 2804.467 kb on + strand, within OHPLBJKB_02690 at 2804.467 kb on + strand, within OHPLBJKB_02690 at 2804.467 kb on + strand, within OHPLBJKB_02690 at 2804.467 kb on + strand, within OHPLBJKB_02690 at 2804.467 kb on + strand, within OHPLBJKB_02690 at 2804.467 kb on + strand, within OHPLBJKB_02690 at 2804.468 kb on - strand, within OHPLBJKB_02690 at 2804.468 kb on - strand, within OHPLBJKB_02690 at 2804.468 kb on - strand, within OHPLBJKB_02690 at 2804.468 kb on - strand, within OHPLBJKB_02690 at 2804.468 kb on - strand, within OHPLBJKB_02690 at 2804.468 kb on - strand, within OHPLBJKB_02690 at 2804.468 kb on - strand, within OHPLBJKB_02690 at 2804.468 kb on - strand, within OHPLBJKB_02690 at 2804.468 kb on - strand, within OHPLBJKB_02690 at 2804.468 kb on - strand, within OHPLBJKB_02690 at 2804.468 kb on - strand, within OHPLBJKB_02690 at 2804.468 kb on - strand, within OHPLBJKB_02690 at 2804.468 kb on - strand, within OHPLBJKB_02690 at 2804.468 kb on - strand, within OHPLBJKB_02690 at 2804.469 kb on + strand, within OHPLBJKB_02690 at 2804.470 kb on - strand, within OHPLBJKB_02690 at 2804.470 kb on - strand, within OHPLBJKB_02690 at 2804.549 kb on + strand, within OHPLBJKB_02690 at 2804.550 kb on - strand, within OHPLBJKB_02690 at 2804.550 kb on - strand, within OHPLBJKB_02690 at 2804.578 kb on + strand, within OHPLBJKB_02690 at 2804.744 kb on + strand, within OHPLBJKB_02691 at 2804.745 kb on - strand, within OHPLBJKB_02691 at 2804.745 kb on - strand, within OHPLBJKB_02691 at 2804.907 kb on + strand, within OHPLBJKB_02691 at 2804.907 kb on + strand, within OHPLBJKB_02691 at 2804.907 kb on + strand, within OHPLBJKB_02691 at 2804.907 kb on + strand, within OHPLBJKB_02691 at 2804.908 kb on - strand, within OHPLBJKB_02691 at 2804.908 kb on - strand, within OHPLBJKB_02691 at 2804.908 kb on - strand, within OHPLBJKB_02691 at 2804.908 kb on - strand, within OHPLBJKB_02691 at 2805.020 kb on + strand, within OHPLBJKB_02691 at 2805.167 kb on + strand, within OHPLBJKB_02691 at 2805.167 kb on + strand, within OHPLBJKB_02691 at 2805.168 kb on - strand, within OHPLBJKB_02691 at 2805.168 kb on - strand, within OHPLBJKB_02691 at 2805.270 kb on - strand at 2805.273 kb on + strand at 2805.273 kb on + strand at 2805.273 kb on + strand at 2805.273 kb on + strand at 2805.361 kb on + strand, within OHPLBJKB_02692 at 2805.361 kb on + strand, within OHPLBJKB_02692 at 2805.361 kb on + strand, within OHPLBJKB_02692 at 2805.362 kb on - strand, within OHPLBJKB_02692 at 2805.362 kb on - strand, within OHPLBJKB_02692 at 2805.362 kb on - strand, within OHPLBJKB_02692 at 2805.362 kb on - strand, within OHPLBJKB_02692 at 2805.362 kb on - strand, within OHPLBJKB_02692 at 2805.362 kb on - strand, within OHPLBJKB_02692 at 2805.362 kb on - strand, within OHPLBJKB_02692 at 2805.362 kb on - strand, within OHPLBJKB_02692 at 2805.491 kb on - strand, within OHPLBJKB_02692 at 2805.534 kb on - strand, within OHPLBJKB_02692 at 2805.584 kb on + strand, within OHPLBJKB_02692 at 2805.592 kb on - strand, within OHPLBJKB_02692 at 2805.592 kb on - strand, within OHPLBJKB_02692 at 2805.592 kb on - strand, within OHPLBJKB_02692 at 2805.626 kb on - strand, within OHPLBJKB_02692 at 2805.641 kb on - strand, within OHPLBJKB_02692 at 2805.665 kb on + strand, within OHPLBJKB_02692 at 2805.749 kb on + strand, within OHPLBJKB_02692 at 2805.749 kb on + strand, within OHPLBJKB_02692 at 2805.788 kb on - strand, within OHPLBJKB_02692 at 2805.788 kb on - strand, within OHPLBJKB_02692 at 2805.794 kb on + strand, within OHPLBJKB_02692 at 2805.796 kb on + strand, within OHPLBJKB_02692 at 2805.796 kb on + strand, within OHPLBJKB_02692 at 2805.796 kb on + strand, within OHPLBJKB_02692 at 2805.796 kb on + strand, within OHPLBJKB_02692 at 2805.796 kb on + strand, within OHPLBJKB_02692 at 2805.797 kb on - strand, within OHPLBJKB_02692 at 2805.797 kb on - strand, within OHPLBJKB_02692 at 2805.797 kb on - strand, within OHPLBJKB_02692 at 2805.797 kb on - strand, within OHPLBJKB_02692 at 2805.797 kb on - strand, within OHPLBJKB_02692 at 2805.797 kb on - strand, within OHPLBJKB_02692 at 2805.805 kb on + strand, within OHPLBJKB_02692 at 2805.805 kb on + strand, within OHPLBJKB_02692 at 2805.806 kb on - strand, within OHPLBJKB_02692 at 2805.806 kb on - strand, within OHPLBJKB_02692 at 2805.806 kb on - strand, within OHPLBJKB_02692 at 2805.806 kb on - strand, within OHPLBJKB_02692 at 2805.806 kb on - strand, within OHPLBJKB_02692 at 2805.806 kb on - strand, within OHPLBJKB_02692 at 2805.880 kb on - strand, within OHPLBJKB_02692 at 2805.926 kb on - strand at 2805.926 kb on - strand at 2805.926 kb on - strand at 2806.379 kb on + strand, within OHPLBJKB_02693 at 2806.380 kb on - strand, within OHPLBJKB_02693 at 2806.651 kb on + strand, within OHPLBJKB_02693 at 2806.651 kb on + strand, within OHPLBJKB_02693
Per-strain Table
Position Strand Gene LocusTag Fraction BWC1S MOI1 remove 2,804,322 - OHPLBJKB_02690 0.12 +0.0 2,804,322 - OHPLBJKB_02690 0.12 +0.2 2,804,384 + OHPLBJKB_02690 0.28 +0.3 2,804,385 - OHPLBJKB_02690 0.28 +1.5 2,804,467 + OHPLBJKB_02690 0.49 +1.6 2,804,467 + OHPLBJKB_02690 0.49 -0.5 2,804,467 + OHPLBJKB_02690 0.49 +1.1 2,804,467 + OHPLBJKB_02690 0.49 +0.3 2,804,467 + OHPLBJKB_02690 0.49 -0.2 2,804,467 + OHPLBJKB_02690 0.49 +0.3 2,804,467 + OHPLBJKB_02690 0.49 -0.7 2,804,467 + OHPLBJKB_02690 0.49 +0.2 2,804,467 + OHPLBJKB_02690 0.49 -0.8 2,804,467 + OHPLBJKB_02690 0.49 -0.9 2,804,467 + OHPLBJKB_02690 0.49 +0.6 2,804,467 + OHPLBJKB_02690 0.49 -1.7 2,804,467 + OHPLBJKB_02690 0.49 +0.4 2,804,467 + OHPLBJKB_02690 0.49 -1.1 2,804,468 - OHPLBJKB_02690 0.49 -0.9 2,804,468 - OHPLBJKB_02690 0.49 +0.1 2,804,468 - OHPLBJKB_02690 0.49 +0.3 2,804,468 - OHPLBJKB_02690 0.49 +1.8 2,804,468 - OHPLBJKB_02690 0.49 -2.1 2,804,468 - OHPLBJKB_02690 0.49 +0.3 2,804,468 - OHPLBJKB_02690 0.49 -1.0 2,804,468 - OHPLBJKB_02690 0.49 +0.7 2,804,468 - OHPLBJKB_02690 0.49 +0.1 2,804,468 - OHPLBJKB_02690 0.49 -0.8 2,804,468 - OHPLBJKB_02690 0.49 +1.1 2,804,468 - OHPLBJKB_02690 0.49 -0.4 2,804,468 - OHPLBJKB_02690 0.49 +0.9 2,804,468 - OHPLBJKB_02690 0.49 -0.8 2,804,469 + OHPLBJKB_02690 0.49 -1.2 2,804,470 - OHPLBJKB_02690 0.49 +0.8 2,804,470 - OHPLBJKB_02690 0.49 +1.1 2,804,549 + OHPLBJKB_02690 0.69 -0.4 2,804,550 - OHPLBJKB_02690 0.69 -0.3 2,804,550 - OHPLBJKB_02690 0.69 -1.7 2,804,578 + OHPLBJKB_02690 0.76 -2.0 2,804,744 + OHPLBJKB_02691 0.13 -1.1 2,804,745 - OHPLBJKB_02691 0.13 -0.7 2,804,745 - OHPLBJKB_02691 0.13 -0.2 2,804,907 + OHPLBJKB_02691 0.41 +1.2 2,804,907 + OHPLBJKB_02691 0.41 -2.0 2,804,907 + OHPLBJKB_02691 0.41 -0.6 2,804,907 + OHPLBJKB_02691 0.41 -0.4 2,804,908 - OHPLBJKB_02691 0.41 -0.7 2,804,908 - OHPLBJKB_02691 0.41 -0.4 2,804,908 - OHPLBJKB_02691 0.41 -1.4 2,804,908 - OHPLBJKB_02691 0.41 +0.3 2,805,020 + OHPLBJKB_02691 0.60 +0.9 2,805,167 + OHPLBJKB_02691 0.85 +0.1 2,805,167 + OHPLBJKB_02691 0.85 +1.1 2,805,168 - OHPLBJKB_02691 0.85 +0.3 2,805,168 - OHPLBJKB_02691 0.85 +0.1 2,805,270 - +0.7 2,805,273 + +1.7 2,805,273 + -0.9 2,805,273 + +0.1 2,805,273 + +0.2 2,805,361 + OHPLBJKB_02692 0.15 +0.3 2,805,361 + OHPLBJKB_02692 0.15 -0.3 2,805,361 + OHPLBJKB_02692 0.15 +0.8 2,805,362 - OHPLBJKB_02692 0.16 -0.6 2,805,362 - OHPLBJKB_02692 0.16 -1.9 2,805,362 - OHPLBJKB_02692 0.16 -1.0 2,805,362 - OHPLBJKB_02692 0.16 -0.0 2,805,362 - OHPLBJKB_02692 0.16 +0.9 2,805,362 - OHPLBJKB_02692 0.16 -0.7 2,805,362 - OHPLBJKB_02692 0.16 +1.1 2,805,362 - OHPLBJKB_02692 0.16 -0.2 2,805,491 - OHPLBJKB_02692 0.34 +1.4 2,805,534 - OHPLBJKB_02692 0.40 +1.1 2,805,584 + OHPLBJKB_02692 0.47 +0.1 2,805,592 - OHPLBJKB_02692 0.48 +0.8 2,805,592 - OHPLBJKB_02692 0.48 +1.6 2,805,592 - OHPLBJKB_02692 0.48 +1.7 2,805,626 - OHPLBJKB_02692 0.53 +0.8 2,805,641 - OHPLBJKB_02692 0.55 -0.6 2,805,665 + OHPLBJKB_02692 0.58 -0.4 2,805,749 + OHPLBJKB_02692 0.70 -0.2 2,805,749 + OHPLBJKB_02692 0.70 -1.0 2,805,788 - OHPLBJKB_02692 0.76 +1.0 2,805,788 - OHPLBJKB_02692 0.76 -0.2 2,805,794 + OHPLBJKB_02692 0.77 +1.7 2,805,796 + OHPLBJKB_02692 0.77 +0.4 2,805,796 + OHPLBJKB_02692 0.77 +0.8 2,805,796 + OHPLBJKB_02692 0.77 -0.0 2,805,796 + OHPLBJKB_02692 0.77 +1.9 2,805,796 + OHPLBJKB_02692 0.77 -1.6 2,805,797 - OHPLBJKB_02692 0.77 -0.3 2,805,797 - OHPLBJKB_02692 0.77 +1.3 2,805,797 - OHPLBJKB_02692 0.77 -0.4 2,805,797 - OHPLBJKB_02692 0.77 +1.2 2,805,797 - OHPLBJKB_02692 0.77 -0.2 2,805,797 - OHPLBJKB_02692 0.77 +1.8 2,805,805 + OHPLBJKB_02692 0.78 +0.6 2,805,805 + OHPLBJKB_02692 0.78 +0.6 2,805,806 - OHPLBJKB_02692 0.78 -0.4 2,805,806 - OHPLBJKB_02692 0.78 -1.0 2,805,806 - OHPLBJKB_02692 0.78 +0.8 2,805,806 - OHPLBJKB_02692 0.78 -0.5 2,805,806 - OHPLBJKB_02692 0.78 -0.6 2,805,806 - OHPLBJKB_02692 0.78 +0.2 2,805,880 - OHPLBJKB_02692 0.89 -1.0 2,805,926 - +0.1 2,805,926 - +0.3 2,805,926 - +1.6 2,806,379 + OHPLBJKB_02693 0.22 -0.0 2,806,380 - OHPLBJKB_02693 0.22 -1.4 2,806,651 + OHPLBJKB_02693 0.38 +0.6 2,806,651 + OHPLBJKB_02693 0.38 +1.0
Or see this region's nucleotide sequence