Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06933 and MPMX19_06934 overlap by 4 nucleotides MPMX19_06934 and MPMX19_06935 are separated by 31 nucleotides MPMX19_06935 and MPMX19_06936 are separated by 45 nucleotides MPMX19_06936 and MPMX19_06937 are separated by 133 nucleotides
MPMX19_06933: MPMX19_06933 - Manganese transport system ATP-binding protein MntB, at 206,033 to 206,803
_06933
MPMX19_06934: MPMX19_06934 - Manganese transport system membrane protein MntB, at 206,800 to 207,684
_06934
MPMX19_06935: MPMX19_06935 - putative periplasmic iron-binding protein, at 207,716 to 208,639
_06935
MPMX19_06936: MPMX19_06936 - hypothetical protein, at 208,685 to 209,401
_06936
MPMX19_06937: MPMX19_06937 - hypothetical protein, at 209,535 to 210,818
_06937
Position (kb) 207
208
209 Strain fitness (log2 ratio) -2
-1
0
1
2 at 206.809 kb on + strand at 206.809 kb on + strand at 206.810 kb on - strand at 206.810 kb on - strand at 206.810 kb on - strand at 206.810 kb on - strand at 207.115 kb on + strand, within MPMX19_06934 at 207.115 kb on + strand, within MPMX19_06934 at 207.115 kb on + strand, within MPMX19_06934 at 207.115 kb on + strand, within MPMX19_06934 at 207.116 kb on - strand, within MPMX19_06934 at 207.116 kb on - strand, within MPMX19_06934 at 207.116 kb on - strand, within MPMX19_06934 at 207.896 kb on + strand, within MPMX19_06935 at 207.896 kb on + strand, within MPMX19_06935 at 207.896 kb on + strand, within MPMX19_06935 at 207.897 kb on - strand, within MPMX19_06935 at 207.897 kb on - strand, within MPMX19_06935 at 207.897 kb on - strand, within MPMX19_06935 at 207.897 kb on - strand, within MPMX19_06935 at 208.005 kb on - strand, within MPMX19_06935 at 208.151 kb on + strand, within MPMX19_06935 at 208.151 kb on + strand, within MPMX19_06935 at 208.151 kb on + strand, within MPMX19_06935 at 208.151 kb on + strand, within MPMX19_06935 at 208.152 kb on - strand, within MPMX19_06935 at 208.152 kb on - strand, within MPMX19_06935 at 208.152 kb on - strand, within MPMX19_06935 at 208.152 kb on - strand, within MPMX19_06935 at 208.152 kb on - strand, within MPMX19_06935 at 208.331 kb on + strand, within MPMX19_06935 at 208.334 kb on + strand, within MPMX19_06935 at 208.334 kb on + strand, within MPMX19_06935 at 208.335 kb on - strand, within MPMX19_06935 at 208.335 kb on - strand, within MPMX19_06935 at 208.335 kb on - strand, within MPMX19_06935 at 208.335 kb on - strand, within MPMX19_06935 at 208.346 kb on + strand, within MPMX19_06935 at 208.346 kb on + strand, within MPMX19_06935 at 208.346 kb on + strand, within MPMX19_06935 at 208.536 kb on - strand, within MPMX19_06935 at 208.536 kb on - strand, within MPMX19_06935 at 208.536 kb on - strand, within MPMX19_06935 at 208.577 kb on + strand at 208.577 kb on + strand at 208.577 kb on + strand at 208.577 kb on + strand at 208.578 kb on - strand at 208.578 kb on - strand at 208.578 kb on - strand at 208.578 kb on - strand at 208.686 kb on + strand at 208.687 kb on - strand at 208.687 kb on - strand at 208.687 kb on - strand at 208.746 kb on + strand at 208.746 kb on + strand at 208.746 kb on + strand at 208.746 kb on + strand at 208.746 kb on + strand at 208.746 kb on + strand at 208.746 kb on + strand at 208.746 kb on + strand at 208.746 kb on + strand at 208.746 kb on + strand at 208.746 kb on + strand at 208.746 kb on + strand at 208.746 kb on + strand at 208.747 kb on - strand at 208.747 kb on - strand at 208.747 kb on - strand at 208.747 kb on - strand at 208.747 kb on - strand at 208.747 kb on - strand at 208.747 kb on - strand at 208.747 kb on - strand at 208.747 kb on - strand at 208.747 kb on - strand at 208.747 kb on - strand at 208.747 kb on - strand at 208.747 kb on - strand at 208.747 kb on - strand at 208.863 kb on + strand, within MPMX19_06936 at 208.863 kb on + strand, within MPMX19_06936 at 208.863 kb on + strand, within MPMX19_06936 at 208.863 kb on + strand, within MPMX19_06936 at 208.864 kb on - strand, within MPMX19_06936 at 208.864 kb on - strand, within MPMX19_06936 at 208.864 kb on - strand, within MPMX19_06936 at 208.864 kb on - strand, within MPMX19_06936 at 208.864 kb on - strand, within MPMX19_06936 at 208.864 kb on - strand, within MPMX19_06936 at 209.121 kb on + strand, within MPMX19_06936 at 209.121 kb on + strand, within MPMX19_06936 at 209.121 kb on + strand, within MPMX19_06936 at 209.121 kb on + strand, within MPMX19_06936 at 209.121 kb on + strand, within MPMX19_06936 at 209.121 kb on + strand, within MPMX19_06936 at 209.122 kb on - strand, within MPMX19_06936 at 209.122 kb on - strand, within MPMX19_06936 at 209.122 kb on - strand, within MPMX19_06936 at 209.122 kb on - strand, within MPMX19_06936 at 209.122 kb on - strand, within MPMX19_06936 at 209.322 kb on + strand, within MPMX19_06936 at 209.322 kb on + strand, within MPMX19_06936 at 209.322 kb on + strand, within MPMX19_06936 at 209.323 kb on - strand, within MPMX19_06936 at 209.323 kb on - strand, within MPMX19_06936 at 209.323 kb on - strand, within MPMX19_06936 at 209.323 kb on - strand, within MPMX19_06936 at 209.323 kb on - strand, within MPMX19_06936 at 209.323 kb on - strand, within MPMX19_06936 at 209.467 kb on + strand at 209.467 kb on + strand at 209.468 kb on - strand at 209.468 kb on - strand at 209.479 kb on - strand at 209.635 kb on + strand at 209.635 kb on + strand at 209.635 kb on + strand at 209.635 kb on + strand at 209.635 kb on + strand at 209.635 kb on + strand at 209.635 kb on + strand at 209.635 kb on + strand at 209.635 kb on + strand at 209.635 kb on + strand at 209.635 kb on + strand at 209.635 kb on + strand at 209.636 kb on - strand at 209.636 kb on - strand at 209.636 kb on - strand at 209.636 kb on - strand at 209.636 kb on - strand at 209.636 kb on - strand at 209.636 kb on - strand at 209.636 kb on - strand at 209.636 kb on - strand at 209.636 kb on - strand at 209.636 kb on - strand at 209.636 kb on - strand at 209.638 kb on + strand at 209.638 kb on + strand at 209.639 kb on - strand at 209.639 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 206,809 + +0.9 206,809 + -1.2 206,810 - -0.4 206,810 - +0.3 206,810 - -1.3 206,810 - +0.0 207,115 + MPMX19_06934 0.36 -1.8 207,115 + MPMX19_06934 0.36 +0.0 207,115 + MPMX19_06934 0.36 -0.3 207,115 + MPMX19_06934 0.36 +0.1 207,116 - MPMX19_06934 0.36 -0.2 207,116 - MPMX19_06934 0.36 -0.7 207,116 - MPMX19_06934 0.36 -1.0 207,896 + MPMX19_06935 0.19 +0.8 207,896 + MPMX19_06935 0.19 -0.9 207,896 + MPMX19_06935 0.19 +0.1 207,897 - MPMX19_06935 0.20 -0.7 207,897 - MPMX19_06935 0.20 +0.2 207,897 - MPMX19_06935 0.20 -1.7 207,897 - MPMX19_06935 0.20 -2.4 208,005 - MPMX19_06935 0.31 +0.3 208,151 + MPMX19_06935 0.47 +0.2 208,151 + MPMX19_06935 0.47 -0.4 208,151 + MPMX19_06935 0.47 -0.7 208,151 + MPMX19_06935 0.47 -1.1 208,152 - MPMX19_06935 0.47 -1.5 208,152 - MPMX19_06935 0.47 -0.7 208,152 - MPMX19_06935 0.47 -0.3 208,152 - MPMX19_06935 0.47 +0.6 208,152 - MPMX19_06935 0.47 +0.5 208,331 + MPMX19_06935 0.67 -0.7 208,334 + MPMX19_06935 0.67 -1.4 208,334 + MPMX19_06935 0.67 -0.3 208,335 - MPMX19_06935 0.67 -0.7 208,335 - MPMX19_06935 0.67 -0.9 208,335 - MPMX19_06935 0.67 -0.1 208,335 - MPMX19_06935 0.67 -0.1 208,346 + MPMX19_06935 0.68 +1.1 208,346 + MPMX19_06935 0.68 -1.2 208,346 + MPMX19_06935 0.68 -0.1 208,536 - MPMX19_06935 0.89 -0.2 208,536 - MPMX19_06935 0.89 -0.7 208,536 - MPMX19_06935 0.89 +0.6 208,577 + -0.8 208,577 + -0.4 208,577 + +0.4 208,577 + -1.1 208,578 - +0.7 208,578 - +1.9 208,578 - +0.7 208,578 - -0.6 208,686 + -0.7 208,687 - -0.1 208,687 - -0.7 208,687 - -1.0 208,746 + -0.7 208,746 + +0.9 208,746 + +0.2 208,746 + -0.6 208,746 + -0.2 208,746 + -1.1 208,746 + -1.4 208,746 + -0.8 208,746 + -1.7 208,746 + -0.7 208,746 + -0.6 208,746 + +0.6 208,746 + -0.7 208,747 - +0.8 208,747 - -0.2 208,747 - +1.2 208,747 - -1.1 208,747 - +0.4 208,747 - -1.0 208,747 - +1.8 208,747 - +0.7 208,747 - +0.8 208,747 - +0.7 208,747 - -0.1 208,747 - -0.2 208,747 - -1.6 208,747 - -0.1 208,863 + MPMX19_06936 0.25 +0.1 208,863 + MPMX19_06936 0.25 +0.8 208,863 + MPMX19_06936 0.25 -1.3 208,863 + MPMX19_06936 0.25 -0.9 208,864 - MPMX19_06936 0.25 +0.1 208,864 - MPMX19_06936 0.25 -2.5 208,864 - MPMX19_06936 0.25 -0.3 208,864 - MPMX19_06936 0.25 +0.9 208,864 - MPMX19_06936 0.25 -0.2 208,864 - MPMX19_06936 0.25 -1.2 209,121 + MPMX19_06936 0.61 +0.6 209,121 + MPMX19_06936 0.61 +0.5 209,121 + MPMX19_06936 0.61 -0.9 209,121 + MPMX19_06936 0.61 -1.2 209,121 + MPMX19_06936 0.61 -0.4 209,121 + MPMX19_06936 0.61 +0.7 209,122 - MPMX19_06936 0.61 +0.3 209,122 - MPMX19_06936 0.61 +0.1 209,122 - MPMX19_06936 0.61 -0.5 209,122 - MPMX19_06936 0.61 -1.7 209,122 - MPMX19_06936 0.61 -1.5 209,322 + MPMX19_06936 0.89 -0.1 209,322 + MPMX19_06936 0.89 -0.9 209,322 + MPMX19_06936 0.89 -0.9 209,323 - MPMX19_06936 0.89 -1.0 209,323 - MPMX19_06936 0.89 -0.9 209,323 - MPMX19_06936 0.89 -1.2 209,323 - MPMX19_06936 0.89 +0.5 209,323 - MPMX19_06936 0.89 -0.1 209,323 - MPMX19_06936 0.89 -0.2 209,467 + -0.2 209,467 + -1.7 209,468 - -1.1 209,468 - -0.1 209,479 - -0.1 209,635 + +0.3 209,635 + +0.7 209,635 + +1.6 209,635 + +1.5 209,635 + -0.7 209,635 + -1.0 209,635 + -1.5 209,635 + -1.1 209,635 + -0.1 209,635 + -1.2 209,635 + -0.7 209,635 + -0.8 209,636 - +0.3 209,636 - +0.7 209,636 - -0.2 209,636 - -0.7 209,636 - +0.3 209,636 - -0.5 209,636 - +0.3 209,636 - -1.1 209,636 - +0.0 209,636 - -0.5 209,636 - +0.1 209,636 - -0.7 209,638 + -1.2 209,638 + -0.3 209,639 - -0.5 209,639 - -0.7
Or see this region's nucleotide sequence