Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06832 and MPMX19_06833 are separated by 74 nucleotides MPMX19_06833 and MPMX19_06834 are separated by 122 nucleotides MPMX19_06834 and MPMX19_06835 are separated by 89 nucleotides MPMX19_06835 and MPMX19_06836 are separated by 140 nucleotides
MPMX19_06832: MPMX19_06832 - L-cystine transport system permease protein YecS, at 97,420 to 98,079
_06832
MPMX19_06833: MPMX19_06833 - Glutamine transport ATP-binding protein GlnQ, at 98,154 to 98,939
_06833
MPMX19_06834: MPMX19_06834 - Vitamin B6 salvage pathway transcriptional repressor PtsJ, at 99,062 to 100,447
_06834
MPMX19_06835: MPMX19_06835 - Leucine-responsive regulatory protein, at 100,537 to 101,043
_06835
MPMX19_06836: MPMX19_06836 - Glutarate-semialdehyde dehydrogenase, at 101,184 to 102,677
_06836
Position (kb)
99
100
101 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 99.048 kb on + strand at 99.049 kb on - strand at 99.516 kb on + strand, within MPMX19_06834 at 99.516 kb on + strand, within MPMX19_06834 at 99.564 kb on + strand, within MPMX19_06834 at 99.564 kb on + strand, within MPMX19_06834 at 99.564 kb on + strand, within MPMX19_06834 at 99.565 kb on - strand, within MPMX19_06834 at 99.565 kb on - strand, within MPMX19_06834 at 99.565 kb on - strand, within MPMX19_06834 at 99.565 kb on - strand, within MPMX19_06834 at 99.565 kb on - strand, within MPMX19_06834 at 99.565 kb on - strand, within MPMX19_06834 at 99.565 kb on - strand, within MPMX19_06834 at 99.840 kb on + strand, within MPMX19_06834 at 99.841 kb on - strand, within MPMX19_06834 at 99.841 kb on - strand, within MPMX19_06834 at 99.841 kb on - strand, within MPMX19_06834 at 99.841 kb on - strand, within MPMX19_06834 at 99.862 kb on + strand, within MPMX19_06834 at 99.862 kb on + strand, within MPMX19_06834 at 99.862 kb on + strand, within MPMX19_06834 at 99.862 kb on + strand, within MPMX19_06834 at 99.862 kb on + strand, within MPMX19_06834 at 99.863 kb on - strand, within MPMX19_06834 at 99.863 kb on - strand, within MPMX19_06834 at 99.863 kb on - strand, within MPMX19_06834 at 99.863 kb on - strand, within MPMX19_06834 at 100.182 kb on + strand, within MPMX19_06834 at 100.182 kb on + strand, within MPMX19_06834 at 100.182 kb on + strand, within MPMX19_06834 at 100.182 kb on + strand, within MPMX19_06834 at 100.182 kb on + strand, within MPMX19_06834 at 100.182 kb on + strand, within MPMX19_06834 at 100.182 kb on + strand, within MPMX19_06834 at 100.183 kb on - strand, within MPMX19_06834 at 100.183 kb on - strand, within MPMX19_06834 at 100.183 kb on - strand, within MPMX19_06834 at 100.183 kb on - strand, within MPMX19_06834 at 100.401 kb on + strand at 100.401 kb on + strand at 100.401 kb on + strand at 100.402 kb on - strand at 100.402 kb on - strand at 100.402 kb on - strand at 100.402 kb on - strand at 100.402 kb on - strand at 100.699 kb on + strand, within MPMX19_06835 at 100.861 kb on + strand, within MPMX19_06835 at 100.862 kb on - strand, within MPMX19_06835 at 100.862 kb on - strand, within MPMX19_06835 at 100.862 kb on - strand, within MPMX19_06835 at 100.862 kb on - strand, within MPMX19_06835 at 100.862 kb on - strand, within MPMX19_06835 at 100.862 kb on - strand, within MPMX19_06835 at 100.862 kb on - strand, within MPMX19_06835 at 100.862 kb on - strand, within MPMX19_06835 at 100.897 kb on + strand, within MPMX19_06835 at 100.897 kb on + strand, within MPMX19_06835 at 100.897 kb on + strand, within MPMX19_06835 at 100.897 kb on + strand, within MPMX19_06835 at 100.898 kb on - strand, within MPMX19_06835 at 100.898 kb on - strand, within MPMX19_06835 at 100.948 kb on + strand, within MPMX19_06835 at 100.948 kb on + strand, within MPMX19_06835 at 100.949 kb on - strand, within MPMX19_06835 at 100.949 kb on - strand, within MPMX19_06835 at 100.957 kb on + strand, within MPMX19_06835 at 100.957 kb on + strand, within MPMX19_06835 at 100.958 kb on - strand, within MPMX19_06835 at 100.958 kb on - strand, within MPMX19_06835 at 100.958 kb on - strand, within MPMX19_06835 at 100.958 kb on - strand, within MPMX19_06835 at 100.958 kb on - strand, within MPMX19_06835 at 100.958 kb on - strand, within MPMX19_06835 at 100.958 kb on - strand, within MPMX19_06835 at 100.958 kb on - strand, within MPMX19_06835 at 100.958 kb on - strand, within MPMX19_06835 at 100.958 kb on - strand, within MPMX19_06835 at 100.958 kb on - strand, within MPMX19_06835 at 100.958 kb on - strand, within MPMX19_06835 at 100.958 kb on - strand, within MPMX19_06835 at 100.958 kb on - strand, within MPMX19_06835 at 100.958 kb on - strand, within MPMX19_06835 at 101.044 kb on + strand at 101.045 kb on - strand at 101.045 kb on - strand at 101.125 kb on - strand at 101.134 kb on - strand at 101.134 kb on - strand at 101.169 kb on - strand at 101.265 kb on + strand at 101.265 kb on + strand at 101.266 kb on - strand at 101.266 kb on - strand at 101.266 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 99,048 + -0.2 99,049 - -0.3 99,516 + MPMX19_06834 0.33 -0.2 99,516 + MPMX19_06834 0.33 -1.0 99,564 + MPMX19_06834 0.36 +1.3 99,564 + MPMX19_06834 0.36 +0.1 99,564 + MPMX19_06834 0.36 -1.8 99,565 - MPMX19_06834 0.36 +0.0 99,565 - MPMX19_06834 0.36 -0.9 99,565 - MPMX19_06834 0.36 -1.8 99,565 - MPMX19_06834 0.36 -1.5 99,565 - MPMX19_06834 0.36 -0.3 99,565 - MPMX19_06834 0.36 +0.5 99,565 - MPMX19_06834 0.36 -1.5 99,840 + MPMX19_06834 0.56 -0.4 99,841 - MPMX19_06834 0.56 -0.7 99,841 - MPMX19_06834 0.56 -0.5 99,841 - MPMX19_06834 0.56 +0.7 99,841 - MPMX19_06834 0.56 +0.1 99,862 + MPMX19_06834 0.58 +0.1 99,862 + MPMX19_06834 0.58 -1.5 99,862 + MPMX19_06834 0.58 +0.7 99,862 + MPMX19_06834 0.58 -0.7 99,862 + MPMX19_06834 0.58 +0.1 99,863 - MPMX19_06834 0.58 -0.1 99,863 - MPMX19_06834 0.58 -0.4 99,863 - MPMX19_06834 0.58 -1.9 99,863 - MPMX19_06834 0.58 -1.2 100,182 + MPMX19_06834 0.81 -0.2 100,182 + MPMX19_06834 0.81 -0.4 100,182 + MPMX19_06834 0.81 +0.1 100,182 + MPMX19_06834 0.81 +0.3 100,182 + MPMX19_06834 0.81 -0.2 100,182 + MPMX19_06834 0.81 -0.1 100,182 + MPMX19_06834 0.81 -0.9 100,183 - MPMX19_06834 0.81 -0.4 100,183 - MPMX19_06834 0.81 -1.4 100,183 - MPMX19_06834 0.81 -1.2 100,183 - MPMX19_06834 0.81 -0.2 100,401 + -0.1 100,401 + -0.1 100,401 + +0.6 100,402 - -0.5 100,402 - -1.0 100,402 - -0.5 100,402 - -0.5 100,402 - -2.2 100,699 + MPMX19_06835 0.32 -0.7 100,861 + MPMX19_06835 0.64 +0.2 100,862 - MPMX19_06835 0.64 -1.4 100,862 - MPMX19_06835 0.64 -2.1 100,862 - MPMX19_06835 0.64 +1.0 100,862 - MPMX19_06835 0.64 +0.3 100,862 - MPMX19_06835 0.64 -0.4 100,862 - MPMX19_06835 0.64 -0.5 100,862 - MPMX19_06835 0.64 +0.3 100,862 - MPMX19_06835 0.64 +0.6 100,897 + MPMX19_06835 0.71 -2.0 100,897 + MPMX19_06835 0.71 +0.9 100,897 + MPMX19_06835 0.71 -1.1 100,897 + MPMX19_06835 0.71 -1.5 100,898 - MPMX19_06835 0.71 -0.2 100,898 - MPMX19_06835 0.71 -0.9 100,948 + MPMX19_06835 0.81 -1.1 100,948 + MPMX19_06835 0.81 -0.7 100,949 - MPMX19_06835 0.81 -0.9 100,949 - MPMX19_06835 0.81 -1.5 100,957 + MPMX19_06835 0.83 -0.2 100,957 + MPMX19_06835 0.83 +1.1 100,958 - MPMX19_06835 0.83 -0.9 100,958 - MPMX19_06835 0.83 -0.9 100,958 - MPMX19_06835 0.83 +0.4 100,958 - MPMX19_06835 0.83 -0.9 100,958 - MPMX19_06835 0.83 -1.0 100,958 - MPMX19_06835 0.83 -0.5 100,958 - MPMX19_06835 0.83 -0.7 100,958 - MPMX19_06835 0.83 -0.1 100,958 - MPMX19_06835 0.83 +0.3 100,958 - MPMX19_06835 0.83 -0.4 100,958 - MPMX19_06835 0.83 -0.2 100,958 - MPMX19_06835 0.83 -0.9 100,958 - MPMX19_06835 0.83 -0.1 100,958 - MPMX19_06835 0.83 -0.2 100,958 - MPMX19_06835 0.83 -2.0 101,044 + -1.1 101,045 - +0.9 101,045 - +0.3 101,125 - -0.1 101,134 - +1.6 101,134 - -1.4 101,169 - -1.2 101,265 + +0.5 101,265 + -3.0 101,266 - -1.5 101,266 - +0.2 101,266 - -1.2
Or see this region's nucleotide sequence