Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06687 and MPMX19_06688 are separated by 15 nucleotides MPMX19_06688 and MPMX19_06689 are separated by 59 nucleotides MPMX19_06689 and MPMX19_06690 are separated by 84 nucleotides MPMX19_06690 and MPMX19_06691 are separated by 16 nucleotides MPMX19_06691 and MPMX19_06692 are separated by 261 nucleotides
MPMX19_06687: MPMX19_06687 - hypothetical protein, at 258,690 to 259,898
_06687
MPMX19_06688: MPMX19_06688 - hypothetical protein, at 259,914 to 260,174
_06688
MPMX19_06689: MPMX19_06689 - hypothetical protein, at 260,234 to 260,575
_06689
MPMX19_06690: MPMX19_06690 - hypothetical protein, at 260,660 to 261,181
_06690
MPMX19_06691: MPMX19_06691 - hypothetical protein, at 261,198 to 261,572
_06691
MPMX19_06692: MPMX19_06692 - hypothetical protein, at 261,834 to 263,531
_06692
Position (kb) 260
261
262 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 259.678 kb on + strand, within MPMX19_06687 at 259.678 kb on + strand, within MPMX19_06687 at 259.678 kb on + strand, within MPMX19_06687 at 259.678 kb on + strand, within MPMX19_06687 at 259.678 kb on + strand, within MPMX19_06687 at 259.679 kb on - strand, within MPMX19_06687 at 259.830 kb on + strand at 259.830 kb on + strand at 259.831 kb on - strand at 259.831 kb on - strand at 259.869 kb on + strand at 259.869 kb on + strand at 259.869 kb on + strand at 259.869 kb on + strand at 259.869 kb on + strand at 259.869 kb on + strand at 259.869 kb on + strand at 259.869 kb on + strand at 259.869 kb on + strand at 259.869 kb on + strand at 259.869 kb on + strand at 259.869 kb on + strand at 259.869 kb on + strand at 259.870 kb on - strand at 259.870 kb on - strand at 260.188 kb on + strand at 260.188 kb on + strand at 260.188 kb on + strand at 260.188 kb on + strand at 260.188 kb on + strand at 260.188 kb on + strand at 260.188 kb on + strand at 260.188 kb on + strand at 260.188 kb on + strand at 260.188 kb on + strand at 260.188 kb on + strand at 260.188 kb on + strand at 260.188 kb on + strand at 260.188 kb on + strand at 260.188 kb on + strand at 260.188 kb on + strand at 260.188 kb on + strand at 260.188 kb on + strand at 260.188 kb on + strand at 260.188 kb on + strand at 260.188 kb on + strand at 260.188 kb on + strand at 260.189 kb on - strand at 260.189 kb on - strand at 260.189 kb on - strand at 260.189 kb on - strand at 260.189 kb on - strand at 260.189 kb on - strand at 260.189 kb on - strand at 260.189 kb on - strand at 260.189 kb on - strand at 260.189 kb on - strand at 260.189 kb on - strand at 260.189 kb on - strand at 260.189 kb on - strand at 260.189 kb on - strand at 260.189 kb on - strand at 260.189 kb on - strand at 260.189 kb on - strand at 260.189 kb on - strand at 260.189 kb on - strand at 260.189 kb on - strand at 260.215 kb on + strand at 260.216 kb on - strand at 260.216 kb on - strand at 260.718 kb on + strand, within MPMX19_06690 at 260.719 kb on - strand, within MPMX19_06690 at 260.739 kb on + strand, within MPMX19_06690 at 260.739 kb on + strand, within MPMX19_06690 at 260.739 kb on + strand, within MPMX19_06690 at 260.739 kb on + strand, within MPMX19_06690 at 260.740 kb on - strand, within MPMX19_06690 at 260.740 kb on - strand, within MPMX19_06690 at 260.740 kb on - strand, within MPMX19_06690 at 260.740 kb on - strand, within MPMX19_06690 at 260.763 kb on + strand, within MPMX19_06690 at 260.763 kb on + strand, within MPMX19_06690 at 260.768 kb on + strand, within MPMX19_06690 at 261.069 kb on + strand, within MPMX19_06690 at 261.069 kb on + strand, within MPMX19_06690 at 261.069 kb on + strand, within MPMX19_06690 at 261.069 kb on + strand, within MPMX19_06690 at 261.069 kb on + strand, within MPMX19_06690 at 261.069 kb on + strand, within MPMX19_06690 at 261.069 kb on + strand, within MPMX19_06690 at 261.070 kb on - strand, within MPMX19_06690 at 261.070 kb on - strand, within MPMX19_06690 at 261.070 kb on - strand, within MPMX19_06690 at 261.070 kb on - strand, within MPMX19_06690 at 261.070 kb on - strand, within MPMX19_06690 at 261.070 kb on - strand, within MPMX19_06690 at 261.070 kb on - strand, within MPMX19_06690 at 261.070 kb on - strand, within MPMX19_06690 at 261.070 kb on - strand, within MPMX19_06690 at 261.070 kb on - strand, within MPMX19_06690 at 261.070 kb on - strand, within MPMX19_06690 at 261.070 kb on - strand, within MPMX19_06690 at 261.070 kb on - strand, within MPMX19_06690 at 261.185 kb on + strand at 261.185 kb on + strand at 261.186 kb on - strand at 261.186 kb on - strand at 261.186 kb on - strand at 261.186 kb on - strand at 261.186 kb on - strand at 261.186 kb on - strand at 261.187 kb on + strand at 261.187 kb on + strand at 261.187 kb on + strand at 261.187 kb on + strand at 261.187 kb on + strand at 261.187 kb on + strand at 261.188 kb on - strand at 261.188 kb on - strand at 261.188 kb on - strand at 261.188 kb on - strand at 261.188 kb on - strand at 261.196 kb on - strand at 261.196 kb on - strand at 261.223 kb on + strand at 261.223 kb on + strand at 261.223 kb on + strand at 261.223 kb on + strand at 261.224 kb on - strand at 261.224 kb on - strand at 261.224 kb on - strand at 261.224 kb on - strand at 261.379 kb on + strand, within MPMX19_06691 at 261.379 kb on + strand, within MPMX19_06691 at 261.380 kb on - strand, within MPMX19_06691 at 261.380 kb on - strand, within MPMX19_06691 at 261.380 kb on - strand, within MPMX19_06691 at 261.433 kb on + strand, within MPMX19_06691 at 261.433 kb on + strand, within MPMX19_06691 at 261.433 kb on + strand, within MPMX19_06691 at 261.434 kb on - strand, within MPMX19_06691 at 261.434 kb on - strand, within MPMX19_06691 at 261.661 kb on + strand at 261.683 kb on - strand at 261.683 kb on - strand at 261.687 kb on + strand at 261.687 kb on + strand at 261.687 kb on + strand at 261.687 kb on + strand at 261.707 kb on + strand at 261.708 kb on - strand at 261.708 kb on - strand at 261.708 kb on - strand at 261.877 kb on + strand at 261.877 kb on + strand at 261.877 kb on + strand at 261.877 kb on + strand at 261.877 kb on + strand at 261.877 kb on + strand at 261.877 kb on + strand at 261.877 kb on + strand at 261.877 kb on + strand at 261.877 kb on + strand at 261.877 kb on + strand at 261.877 kb on + strand at 261.877 kb on + strand at 261.877 kb on + strand at 261.877 kb on + strand at 261.878 kb on - strand at 261.878 kb on - strand at 261.878 kb on - strand at 261.878 kb on - strand at 261.878 kb on - strand at 261.878 kb on - strand at 261.878 kb on - strand at 261.878 kb on - strand at 261.878 kb on - strand at 261.878 kb on - strand at 261.878 kb on - strand at 261.878 kb on - strand at 261.878 kb on - strand at 261.878 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 259,678 + MPMX19_06687 0.82 +0.1 259,678 + MPMX19_06687 0.82 +0.5 259,678 + MPMX19_06687 0.82 -1.0 259,678 + MPMX19_06687 0.82 +2.2 259,678 + MPMX19_06687 0.82 -1.3 259,679 - MPMX19_06687 0.82 -0.2 259,830 + -0.8 259,830 + -0.0 259,831 - -0.8 259,831 - +0.5 259,869 + -0.3 259,869 + -0.6 259,869 + -0.6 259,869 + +0.2 259,869 + +0.1 259,869 + -0.3 259,869 + +0.7 259,869 + +0.2 259,869 + -0.1 259,869 + +0.4 259,869 + -0.8 259,869 + -0.4 259,869 + -1.0 259,870 - -1.7 259,870 - -0.6 260,188 + -0.2 260,188 + -0.6 260,188 + +0.2 260,188 + -0.2 260,188 + -0.2 260,188 + -0.8 260,188 + +0.8 260,188 + -1.2 260,188 + +0.4 260,188 + -1.5 260,188 + -0.4 260,188 + +0.9 260,188 + -0.2 260,188 + -1.5 260,188 + -0.6 260,188 + -0.8 260,188 + +0.3 260,188 + +0.8 260,188 + -0.8 260,188 + -0.3 260,188 + +0.5 260,188 + -1.3 260,189 - -0.7 260,189 - -0.3 260,189 - -0.6 260,189 - -0.5 260,189 - -0.5 260,189 - +0.3 260,189 - -0.1 260,189 - +0.4 260,189 - +0.1 260,189 - -1.5 260,189 - +0.5 260,189 - -0.1 260,189 - -0.2 260,189 - -0.5 260,189 - +0.2 260,189 - -0.7 260,189 - -0.0 260,189 - +0.5 260,189 - -1.5 260,189 - -0.8 260,215 + +0.5 260,216 - -2.2 260,216 - +0.8 260,718 + MPMX19_06690 0.11 +0.8 260,719 - MPMX19_06690 0.11 +0.7 260,739 + MPMX19_06690 0.15 -0.3 260,739 + MPMX19_06690 0.15 +0.6 260,739 + MPMX19_06690 0.15 -0.8 260,739 + MPMX19_06690 0.15 +0.1 260,740 - MPMX19_06690 0.15 -0.3 260,740 - MPMX19_06690 0.15 -1.1 260,740 - MPMX19_06690 0.15 -1.0 260,740 - MPMX19_06690 0.15 -0.8 260,763 + MPMX19_06690 0.20 -0.1 260,763 + MPMX19_06690 0.20 -0.6 260,768 + MPMX19_06690 0.21 +3.2 261,069 + MPMX19_06690 0.78 +0.1 261,069 + MPMX19_06690 0.78 -0.9 261,069 + MPMX19_06690 0.78 -1.4 261,069 + MPMX19_06690 0.78 -2.2 261,069 + MPMX19_06690 0.78 -0.7 261,069 + MPMX19_06690 0.78 +1.6 261,069 + MPMX19_06690 0.78 -2.3 261,070 - MPMX19_06690 0.79 +1.8 261,070 - MPMX19_06690 0.79 +0.1 261,070 - MPMX19_06690 0.79 +1.4 261,070 - MPMX19_06690 0.79 -1.2 261,070 - MPMX19_06690 0.79 -1.3 261,070 - MPMX19_06690 0.79 +0.9 261,070 - MPMX19_06690 0.79 -0.0 261,070 - MPMX19_06690 0.79 +0.4 261,070 - MPMX19_06690 0.79 +0.8 261,070 - MPMX19_06690 0.79 -0.2 261,070 - MPMX19_06690 0.79 +0.1 261,070 - MPMX19_06690 0.79 -1.3 261,070 - MPMX19_06690 0.79 +1.0 261,185 + -0.7 261,185 + -1.3 261,186 - -0.4 261,186 - -0.5 261,186 - -0.6 261,186 - -0.2 261,186 - -0.4 261,186 - -0.0 261,187 + -0.5 261,187 + +0.1 261,187 + -0.5 261,187 + +0.6 261,187 + -0.3 261,187 + -0.0 261,188 - -1.5 261,188 - -1.6 261,188 - -1.1 261,188 - -1.2 261,188 - +0.2 261,196 - +1.5 261,196 - -1.7 261,223 + -0.0 261,223 + -0.5 261,223 + -0.3 261,223 + -1.2 261,224 - -0.9 261,224 - -0.6 261,224 - -1.9 261,224 - -0.5 261,379 + MPMX19_06691 0.48 -1.8 261,379 + MPMX19_06691 0.48 -1.0 261,380 - MPMX19_06691 0.49 -0.3 261,380 - MPMX19_06691 0.49 -0.3 261,380 - MPMX19_06691 0.49 -0.3 261,433 + MPMX19_06691 0.63 -0.1 261,433 + MPMX19_06691 0.63 +1.4 261,433 + MPMX19_06691 0.63 -1.0 261,434 - MPMX19_06691 0.63 -0.3 261,434 - MPMX19_06691 0.63 -0.2 261,661 + +0.7 261,683 - -0.5 261,683 - +2.3 261,687 + -1.6 261,687 + -1.3 261,687 + +0.1 261,687 + +0.0 261,707 + +0.1 261,708 - -1.3 261,708 - -0.6 261,708 - -2.5 261,877 + -1.7 261,877 + -0.8 261,877 + -1.9 261,877 + -0.1 261,877 + -0.3 261,877 + -1.3 261,877 + -2.1 261,877 + -2.5 261,877 + +0.8 261,877 + -0.9 261,877 + -0.6 261,877 + +0.8 261,877 + -0.6 261,877 + -1.1 261,877 + -0.3 261,878 - -0.5 261,878 - -0.0 261,878 - +1.2 261,878 - -1.1 261,878 - -0.3 261,878 - -0.0 261,878 - -0.1 261,878 - -1.1 261,878 - -1.2 261,878 - -0.8 261,878 - -1.9 261,878 - +0.8 261,878 - +0.8 261,878 - -0.0
Or see this region's nucleotide sequence