Strain Fitness in Azospirillum sp. SherDot2

Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06547

Experiment: NF

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	NF
				remove
8,898	-	MPMX19_06546	0.68	+1.0
8,898	-	MPMX19_06546	0.68	-0.6
9,377	+			-0.9
9,378	-			+0.2
9,393	-			+0.1
9,393	-			+0.4
9,393	-			-1.6
9,393	-			+0.5
9,393	-			-1.2
9,393	-			-0.4
9,393	-			-1.1
9,393	-			-0.6
9,415	-			-0.3
9,415	-			-0.5
9,415	-			+0.1
9,415	-			-1.2
9,499	+			+0.4
9,606	+			-2.8
9,606	+			+1.8
9,606	+			-1.3
9,606	+			+0.2
9,606	+			+0.4
9,606	+			+0.7
9,606	+			+0.2
9,606	+			-0.1
9,606	+			-1.4
9,606	+			+0.1
9,606	+			-0.9
9,606	+			+0.6
9,606	+			-1.6
9,607	-			-0.7
9,607	-			-1.1
9,607	-			-0.8
9,607	-			-2.2
9,607	-			-1.7
9,607	-			+1.0
9,607	-			+1.0
9,607	-			-0.4
9,607	-			-0.8
9,607	-			-0.8
9,607	-			-1.2
9,607	-			-1.3
9,663	+			-1.2
9,663	+			-3.1
9,664	-			-0.8
9,664	-			-0.8
9,664	-			-0.6
9,664	-			-2.3
9,664	-			-0.5
9,664	-			-0.3
9,673	+			-1.1
9,673	+			-0.0
9,673	+			+0.0
9,673	+			-1.6
9,673	+			+0.0
9,673	+			-1.5
9,673	+			-0.6
9,673	+			-0.8
9,673	+			-1.7
9,673	+			-2.1
9,674	-			-0.8
9,674	-			-0.7
9,674	-			-1.1
9,674	-			-2.3
9,674	-			-0.5
9,674	-			-0.0
9,674	-			-1.0
9,674	-			-1.6
9,674	-			-1.1
9,674	-			-1.6
9,674	-			+1.0
9,674	-			-0.7
9,674	-			-0.9
9,674	-			-0.6
9,676	+			-1.2
9,676	+			+0.2
9,676	+			-1.5
9,676	+			-0.9
9,676	+			+1.4
9,676	+			-1.6
9,676	+			+0.1
9,676	+			+0.2
9,676	+			-0.0
9,676	+			-0.5
9,676	+			-1.9
9,676	+			-1.7
9,676	+			-0.9
9,676	+			-0.5
9,676	+			-0.3
9,676	+			-0.6
9,676	+			-1.1
9,676	+			-1.1
9,676	+			-1.0
9,676	+			-1.1
9,676	+			-0.6
9,676	+			-1.4
9,676	+			-1.3
9,677	-			-0.6
9,677	-			-0.9
9,677	-			-1.4
9,677	-			+0.1
9,677	-			-1.4
9,677	-			-0.7
9,677	-			-1.0
9,677	-			-1.7
9,677	-			-0.5
9,724	+	MPMX19_06547	0.24	-1.5
9,724	+	MPMX19_06547	0.24	+0.7
9,724	+	MPMX19_06547	0.24	-1.0
9,724	+	MPMX19_06547	0.24	-3.0
9,724	+	MPMX19_06547	0.24	-2.0
9,724	+	MPMX19_06547	0.24	-2.0
9,725	-	MPMX19_06547	0.25	-1.6
9,725	-	MPMX19_06547	0.25	-2.6
9,725	-	MPMX19_06547	0.25	-1.7
9,725	-	MPMX19_06547	0.25	-0.8
9,725	-	MPMX19_06547	0.25	-0.1
9,862	+	MPMX19_06547	0.71	-0.6
9,862	+	MPMX19_06547	0.71	+0.4
9,862	+	MPMX19_06547	0.71	+0.6
9,863	-	MPMX19_06547	0.71	-0.8
9,863	-	MPMX19_06547	0.71	+0.6
9,863	-	MPMX19_06547	0.71	-1.1
9,874	+	MPMX19_06547	0.75	-0.8
9,874	+	MPMX19_06547	0.75	-0.8
9,875	-	MPMX19_06547	0.75	-0.9
9,931	+			+0.0
9,931	+			-0.2
9,931	+			-1.0
9,931	+			+0.4
9,931	+			-0.6
9,931	+			-0.5
9,931	+			-1.1
9,932	-			-2.4
9,932	-			-1.6
9,932	-			-2.2
9,932	-			+0.5
10,212	+			-0.5
10,212	+			+0.7
10,212	+			-0.4
10,212	+			+0.1
10,212	+			-0.2
10,212	+			+0.8
10,213	-			+0.5
10,213	-			-0.7
10,213	-			-1.5
10,213	-			-0.6
10,213	-			+1.6
10,213	-			-0.4
10,213	-			-0.0
10,213	-			+0.2
10,213	-			+0.2
10,213	-			+0.0
10,214	+			-0.7
10,214	+			+0.2
10,214	+			+0.4
10,214	+			-1.9
10,214	+			-0.1
10,214	+			+0.5
10,214	+			-1.2
10,214	+			-2.0
10,214	+			-0.7
10,215	-			-1.5
10,215	-			+1.0
10,215	-			+1.8
10,215	-			-0.3
10,407	+	MPMX19_06548	0.15	+0.2
10,407	+	MPMX19_06548	0.15	+0.2
10,407	+	MPMX19_06548	0.15	+1.3
10,407	+	MPMX19_06548	0.15	-0.6
10,407	+	MPMX19_06548	0.15	+0.1
10,408	-	MPMX19_06548	0.16	+0.2
10,408	-	MPMX19_06548	0.16	-0.0
10,408	-	MPMX19_06548	0.16	+0.1
10,408	-	MPMX19_06548	0.16	-0.3
10,408	-	MPMX19_06548	0.16	+0.1
10,467	+	MPMX19_06548	0.18	-0.9
10,467	+	MPMX19_06548	0.18	+0.9
10,467	+	MPMX19_06548	0.18	+0.8
10,467	+	MPMX19_06548	0.18	-0.3
10,467	+	MPMX19_06548	0.18	-0.0
10,467	+	MPMX19_06548	0.18	+0.5
10,467	+	MPMX19_06548	0.18	-0.5
10,467	+	MPMX19_06548	0.18	-1.6
10,467	+	MPMX19_06548	0.18	-0.0
10,467	+	MPMX19_06548	0.18	-1.9
10,468	-	MPMX19_06548	0.18	-0.8
10,468	-	MPMX19_06548	0.18	+0.6
10,468	-	MPMX19_06548	0.18	-1.8
10,468	-	MPMX19_06548	0.18	-0.7
10,468	-	MPMX19_06548	0.18	+0.8
10,468	-	MPMX19_06548	0.18	-1.3
10,468	-	MPMX19_06548	0.18	-0.0
10,468	-	MPMX19_06548	0.18	+0.2
10,468	-	MPMX19_06548	0.18	-0.1
10,468	-	MPMX19_06548	0.18	-1.2
10,468	-	MPMX19_06548	0.18	-1.8
10,468	-	MPMX19_06548	0.18	+0.0
10,468	-	MPMX19_06548	0.18	-0.2
10,468	-	MPMX19_06548	0.18	+0.0
10,468	-	MPMX19_06548	0.18	-0.4
10,468	-	MPMX19_06548	0.18	-0.0
10,468	-	MPMX19_06548	0.18	-0.0
10,468	-	MPMX19_06548	0.18	-0.6
10,468	-	MPMX19_06548	0.18	-0.3
10,488	+	MPMX19_06548	0.19	-0.3
10,488	+	MPMX19_06548	0.19	+0.2
10,488	+	MPMX19_06548	0.19	-0.9
10,489	-	MPMX19_06548	0.19	+0.1
10,489	-	MPMX19_06548	0.19	-1.1
10,489	-	MPMX19_06548	0.19	+0.3
10,489	-	MPMX19_06548	0.19	+0.6
10,509	+	MPMX19_06548	0.20	-0.7
10,509	+	MPMX19_06548	0.20	-1.5
10,509	+	MPMX19_06548	0.20	-0.0
10,509	+	MPMX19_06548	0.20	+0.1
10,509	+	MPMX19_06548	0.20	+0.2
10,509	+	MPMX19_06548	0.20	-0.3
10,509	+	MPMX19_06548	0.20	-0.6
10,510	-	MPMX19_06548	0.20	+1.2
10,510	-	MPMX19_06548	0.20	-1.2
10,510	-	MPMX19_06548	0.20	-1.8
10,510	-	MPMX19_06548	0.20	+0.4
10,510	-	MPMX19_06548	0.20	-1.8
10,554	+	MPMX19_06548	0.22	+0.4
10,554	+	MPMX19_06548	0.22	+0.7
10,554	+	MPMX19_06548	0.22	-1.3
10,554	+	MPMX19_06548	0.22	-0.2
10,554	+	MPMX19_06548	0.22	-0.0
10,554	+	MPMX19_06548	0.22	-1.2
10,554	+	MPMX19_06548	0.22	-0.7
10,555	-	MPMX19_06548	0.22	-2.4
10,555	-	MPMX19_06548	0.22	-2.1
10,583	+	MPMX19_06548	0.23	-1.3
10,583	+	MPMX19_06548	0.23	-0.2
10,583	+	MPMX19_06548	0.23	+1.2
10,584	-	MPMX19_06548	0.23	-0.1
10,584	-	MPMX19_06548	0.23	-0.9
10,622	+	MPMX19_06548	0.24	-1.6
10,662	+	MPMX19_06548	0.26	-0.7
10,662	+	MPMX19_06548	0.26	+0.8
10,662	+	MPMX19_06548	0.26	-0.2
10,662	+	MPMX19_06548	0.26	-1.1
10,662	+	MPMX19_06548	0.26	-0.6
10,662	+	MPMX19_06548	0.26	-0.6
10,662	+	MPMX19_06548	0.26	-0.8
10,662	+	MPMX19_06548	0.26	+0.1
10,662	+	MPMX19_06548	0.26	-1.3
10,662	+	MPMX19_06548	0.26	-0.5
10,662	+	MPMX19_06548	0.26	-0.3
10,663	-	MPMX19_06548	0.26	+2.0
10,663	-	MPMX19_06548	0.26	+0.3
10,663	-	MPMX19_06548	0.26	+0.4
10,663	-	MPMX19_06548	0.26	-0.1
10,663	-	MPMX19_06548	0.26	-1.1
10,663	-	MPMX19_06548	0.26	+0.2
10,663	-	MPMX19_06548	0.26	-0.6
10,663	-	MPMX19_06548	0.26	+0.4
10,663	-	MPMX19_06548	0.26	-1.3
10,663	-	MPMX19_06548	0.26	-0.1
10,663	-	MPMX19_06548	0.26	+0.5
10,728	+	MPMX19_06548	0.29	-1.5
10,729	-	MPMX19_06548	0.29	-0.6
10,729	-	MPMX19_06548	0.29	-0.6
10,786	-	MPMX19_06548	0.31	-0.8
10,786	-	MPMX19_06548	0.31	-0.1
10,786	-	MPMX19_06548	0.31	-2.3
10,786	-	MPMX19_06548	0.31	+1.2
10,851	+	MPMX19_06548	0.34	+0.6
10,851	+	MPMX19_06548	0.34	+0.6
10,851	+	MPMX19_06548	0.34	-0.3
10,851	+	MPMX19_06548	0.34	-0.0
10,851	+	MPMX19_06548	0.34	-0.2
10,851	+	MPMX19_06548	0.34	+0.7
10,851	+	MPMX19_06548	0.34	-1.7
10,851	+	MPMX19_06548	0.34	-1.4
10,851	+	MPMX19_06548	0.34	+0.1
10,851	+	MPMX19_06548	0.34	-2.3
10,852	-	MPMX19_06548	0.34	+0.2
10,852	-	MPMX19_06548	0.34	-1.1
10,852	-	MPMX19_06548	0.34	-1.5
10,852	-	MPMX19_06548	0.34	-1.7
10,852	-	MPMX19_06548	0.34	+0.1
10,852	-	MPMX19_06548	0.34	-0.5
10,852	-	MPMX19_06548	0.34	-0.8
10,852	-	MPMX19_06548	0.34	-0.1
10,852	-	MPMX19_06548	0.34	+2.2
10,852	-	MPMX19_06548	0.34	-1.0
10,852	-	MPMX19_06548	0.34	-0.0
10,860	+	MPMX19_06548	0.34	-0.6
10,860	+	MPMX19_06548	0.34	+1.0
10,860	+	MPMX19_06548	0.34	-0.8
10,861	-	MPMX19_06548	0.34	-0.6
10,861	-	MPMX19_06548	0.34	-0.0
10,861	-	MPMX19_06548	0.34	-0.3
10,861	-	MPMX19_06548	0.34	-1.2
10,900	-	MPMX19_06548	0.36	-0.3
10,900	-	MPMX19_06548	0.36	-2.6
10,905	+	MPMX19_06548	0.36	-1.9
10,905	+	MPMX19_06548	0.36	-0.8
10,906	-	MPMX19_06548	0.36	+1.3
10,906	-	MPMX19_06548	0.36	-0.5
10,906	-	MPMX19_06548	0.36	-1.0
10,906	-	MPMX19_06548	0.36	-0.9
10,906	-	MPMX19_06548	0.36	+0.1
10,906	-	MPMX19_06548	0.36	+0.8

Or see this region's nucleotide sequence