Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06484 and MPMX19_06485 are separated by 49 nucleotides MPMX19_06485 and MPMX19_06486 are separated by 27 nucleotides
MPMX19_06484: MPMX19_06484 - hypothetical protein, at 267,665 to 268,717
_06484
MPMX19_06485: MPMX19_06485 - putative malonic semialdehyde reductase RutE, at 268,767 to 269,402
_06485
MPMX19_06486: MPMX19_06486 - Phenylacetate-coenzyme A ligase, at 269,430 to 270,764
_06486
Position (kb) 268
269
270 Strain fitness (log2 ratio) -2
-1
0
1
2 at 267.814 kb on - strand, within MPMX19_06484 at 268.142 kb on + strand, within MPMX19_06484 at 268.142 kb on + strand, within MPMX19_06484 at 268.143 kb on - strand, within MPMX19_06484 at 268.143 kb on - strand, within MPMX19_06484 at 268.212 kb on - strand, within MPMX19_06484 at 268.604 kb on + strand, within MPMX19_06484 at 268.604 kb on + strand, within MPMX19_06484 at 268.604 kb on + strand, within MPMX19_06484 at 268.604 kb on + strand, within MPMX19_06484 at 268.604 kb on + strand, within MPMX19_06484 at 268.604 kb on + strand, within MPMX19_06484 at 268.605 kb on - strand, within MPMX19_06484 at 268.605 kb on - strand, within MPMX19_06484 at 268.605 kb on - strand, within MPMX19_06484 at 268.605 kb on - strand, within MPMX19_06484 at 268.605 kb on - strand, within MPMX19_06484 at 268.605 kb on - strand, within MPMX19_06484 at 268.605 kb on - strand, within MPMX19_06484 at 268.605 kb on - strand, within MPMX19_06484 at 268.605 kb on - strand, within MPMX19_06484 at 268.605 kb on - strand, within MPMX19_06484 at 268.605 kb on - strand, within MPMX19_06484 at 268.605 kb on - strand, within MPMX19_06484 at 268.605 kb on - strand, within MPMX19_06484 at 268.605 kb on - strand, within MPMX19_06484 at 268.607 kb on + strand, within MPMX19_06484 at 268.607 kb on + strand, within MPMX19_06484 at 268.607 kb on + strand, within MPMX19_06484 at 268.608 kb on - strand, within MPMX19_06484 at 268.608 kb on - strand, within MPMX19_06484 at 268.967 kb on - strand, within MPMX19_06485 at 268.967 kb on - strand, within MPMX19_06485 at 268.967 kb on - strand, within MPMX19_06485 at 269.048 kb on - strand, within MPMX19_06485 at 269.048 kb on - strand, within MPMX19_06485 at 269.059 kb on - strand, within MPMX19_06485 at 269.059 kb on - strand, within MPMX19_06485 at 269.059 kb on - strand, within MPMX19_06485 at 269.059 kb on - strand, within MPMX19_06485 at 269.059 kb on - strand, within MPMX19_06485 at 269.059 kb on - strand, within MPMX19_06485 at 269.092 kb on + strand, within MPMX19_06485 at 269.092 kb on + strand, within MPMX19_06485 at 269.092 kb on + strand, within MPMX19_06485 at 269.092 kb on + strand, within MPMX19_06485 at 269.245 kb on + strand, within MPMX19_06485 at 269.245 kb on + strand, within MPMX19_06485 at 269.246 kb on - strand, within MPMX19_06485 at 269.431 kb on + strand at 269.432 kb on - strand at 269.614 kb on - strand, within MPMX19_06486 at 269.946 kb on - strand, within MPMX19_06486 at 270.022 kb on + strand, within MPMX19_06486 at 270.025 kb on + strand, within MPMX19_06486 at 270.025 kb on + strand, within MPMX19_06486 at 270.025 kb on + strand, within MPMX19_06486 at 270.025 kb on + strand, within MPMX19_06486 at 270.025 kb on + strand, within MPMX19_06486 at 270.031 kb on + strand, within MPMX19_06486 at 270.031 kb on + strand, within MPMX19_06486 at 270.031 kb on + strand, within MPMX19_06486
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 267,814 - MPMX19_06484 0.14 -0.4 268,142 + MPMX19_06484 0.45 -1.3 268,142 + MPMX19_06484 0.45 +1.0 268,143 - MPMX19_06484 0.45 -0.2 268,143 - MPMX19_06484 0.45 +0.1 268,212 - MPMX19_06484 0.52 +1.5 268,604 + MPMX19_06484 0.89 -0.9 268,604 + MPMX19_06484 0.89 +0.5 268,604 + MPMX19_06484 0.89 +0.2 268,604 + MPMX19_06484 0.89 +0.9 268,604 + MPMX19_06484 0.89 +0.4 268,604 + MPMX19_06484 0.89 -0.0 268,605 - MPMX19_06484 0.89 -0.9 268,605 - MPMX19_06484 0.89 +0.2 268,605 - MPMX19_06484 0.89 +0.2 268,605 - MPMX19_06484 0.89 +0.7 268,605 - MPMX19_06484 0.89 -1.1 268,605 - MPMX19_06484 0.89 -0.9 268,605 - MPMX19_06484 0.89 +0.3 268,605 - MPMX19_06484 0.89 +1.3 268,605 - MPMX19_06484 0.89 -0.1 268,605 - MPMX19_06484 0.89 -0.8 268,605 - MPMX19_06484 0.89 -0.7 268,605 - MPMX19_06484 0.89 +1.6 268,605 - MPMX19_06484 0.89 +0.1 268,605 - MPMX19_06484 0.89 -1.9 268,607 + MPMX19_06484 0.89 +0.1 268,607 + MPMX19_06484 0.89 -0.4 268,607 + MPMX19_06484 0.89 -0.5 268,608 - MPMX19_06484 0.90 +1.2 268,608 - MPMX19_06484 0.90 +1.4 268,967 - MPMX19_06485 0.31 -0.7 268,967 - MPMX19_06485 0.31 +1.1 268,967 - MPMX19_06485 0.31 +0.6 269,048 - MPMX19_06485 0.44 +0.3 269,048 - MPMX19_06485 0.44 +0.4 269,059 - MPMX19_06485 0.46 +0.3 269,059 - MPMX19_06485 0.46 -0.2 269,059 - MPMX19_06485 0.46 +0.6 269,059 - MPMX19_06485 0.46 -0.0 269,059 - MPMX19_06485 0.46 -0.3 269,059 - MPMX19_06485 0.46 +1.2 269,092 + MPMX19_06485 0.51 -0.6 269,092 + MPMX19_06485 0.51 -0.1 269,092 + MPMX19_06485 0.51 -0.8 269,092 + MPMX19_06485 0.51 +0.5 269,245 + MPMX19_06485 0.75 +0.1 269,245 + MPMX19_06485 0.75 -0.8 269,246 - MPMX19_06485 0.75 -1.8 269,431 + -0.3 269,432 - +0.3 269,614 - MPMX19_06486 0.14 -0.1 269,946 - MPMX19_06486 0.39 -0.1 270,022 + MPMX19_06486 0.44 +0.5 270,025 + MPMX19_06486 0.45 +1.4 270,025 + MPMX19_06486 0.45 -0.4 270,025 + MPMX19_06486 0.45 -1.4 270,025 + MPMX19_06486 0.45 -0.9 270,025 + MPMX19_06486 0.45 -0.7 270,031 + MPMX19_06486 0.45 +1.1 270,031 + MPMX19_06486 0.45 +0.3 270,031 + MPMX19_06486 0.45 +2.5
Or see this region's nucleotide sequence