Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06431

Experiment: NF

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_06430 and MPMX19_06431 are separated by 186 nucleotidesMPMX19_06431 and MPMX19_06432 are separated by 98 nucleotidesMPMX19_06432 and MPMX19_06433 are separated by 229 nucleotides MPMX19_06430: MPMX19_06430 - Copper-exporting P-type ATPase, at 201,762 to 204,200 _06430 MPMX19_06431: MPMX19_06431 - hypothetical protein, at 204,387 to 204,713 _06431 MPMX19_06432: MPMX19_06432 - Copper chaperone CopZ, at 204,812 to 205,012 _06432 MPMX19_06433: MPMX19_06433 - Tn3 family transposase ISAzs17, at 205,242 to 205,946 _06433 Position (kb) 204 205Strain fitness (log2 ratio) -2 -1 0 1 2at 203.404 kb on + strand, within MPMX19_06430at 203.404 kb on + strand, within MPMX19_06430at 203.404 kb on + strand, within MPMX19_06430at 203.404 kb on + strand, within MPMX19_06430at 203.404 kb on + strand, within MPMX19_06430at 203.405 kb on - strand, within MPMX19_06430at 203.405 kb on - strand, within MPMX19_06430at 203.405 kb on - strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.449 kb on + strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.450 kb on - strand, within MPMX19_06430at 203.457 kb on - strand, within MPMX19_06430at 203.502 kb on - strand, within MPMX19_06430at 203.502 kb on - strand, within MPMX19_06430at 203.502 kb on - strand, within MPMX19_06430at 203.530 kb on + strand, within MPMX19_06430at 203.530 kb on + strand, within MPMX19_06430at 203.530 kb on + strand, within MPMX19_06430at 203.531 kb on - strand, within MPMX19_06430at 203.542 kb on + strand, within MPMX19_06430at 203.543 kb on - strand, within MPMX19_06430at 203.617 kb on + strand, within MPMX19_06430at 203.618 kb on - strand, within MPMX19_06430at 203.618 kb on - strand, within MPMX19_06430at 203.618 kb on - strand, within MPMX19_06430at 203.618 kb on - strand, within MPMX19_06430at 203.618 kb on - strand, within MPMX19_06430at 203.640 kb on - strand, within MPMX19_06430at 203.640 kb on - strand, within MPMX19_06430at 203.640 kb on - strand, within MPMX19_06430at 203.761 kb on + strand, within MPMX19_06430at 203.762 kb on - strand, within MPMX19_06430at 203.918 kb on + strand, within MPMX19_06430at 203.918 kb on + strand, within MPMX19_06430at 203.918 kb on + strand, within MPMX19_06430at 203.918 kb on + strand, within MPMX19_06430at 203.918 kb on + strand, within MPMX19_06430at 203.919 kb on - strand, within MPMX19_06430at 203.959 kb on + strandat 204.054 kb on + strandat 204.055 kb on - strandat 204.055 kb on - strandat 204.055 kb on - strandat 204.055 kb on - strandat 204.219 kb on + strandat 204.219 kb on + strandat 204.219 kb on + strandat 204.219 kb on + strandat 204.219 kb on + strandat 204.220 kb on - strandat 204.220 kb on - strandat 204.220 kb on - strandat 204.220 kb on - strandat 204.388 kb on + strandat 204.388 kb on + strandat 204.388 kb on + strandat 204.389 kb on - strandat 204.389 kb on - strandat 204.389 kb on - strandat 204.389 kb on - strandat 204.389 kb on - strandat 204.389 kb on - strandat 204.389 kb on - strandat 204.738 kb on + strandat 204.738 kb on + strandat 204.738 kb on + strandat 204.739 kb on - strandat 204.739 kb on - strandat 204.739 kb on - strandat 204.740 kb on + strandat 204.740 kb on + strandat 204.740 kb on + strandat 204.740 kb on + strandat 204.740 kb on + strandat 204.740 kb on + strandat 204.740 kb on + strandat 204.740 kb on + strandat 204.740 kb on + strandat 204.740 kb on + strandat 204.740 kb on + strandat 204.741 kb on - strandat 204.741 kb on - strandat 204.741 kb on - strandat 204.741 kb on - strandat 204.741 kb on - strandat 204.741 kb on - strandat 204.741 kb on - strandat 204.741 kb on - strandat 204.741 kb on - strandat 204.741 kb on - strandat 204.741 kb on - strandat 204.741 kb on - strandat 205.056 kb on - strandat 205.056 kb on - strandat 205.056 kb on - strandat 205.056 kb on - strandat 205.072 kb on + strandat 205.073 kb on - strandat 205.073 kb on - strandat 205.106 kb on + strandat 205.106 kb on + strandat 205.106 kb on + strandat 205.106 kb on + strandat 205.107 kb on - strandat 205.107 kb on - strandat 205.144 kb on - strandat 205.152 kb on + strandat 205.194 kb on + strandat 205.194 kb on + strandat 205.194 kb on + strandat 205.195 kb on - strandat 205.195 kb on - strandat 205.318 kb on + strand, within MPMX19_06433at 205.318 kb on + strand, within MPMX19_06433at 205.318 kb on + strand, within MPMX19_06433at 205.318 kb on + strand, within MPMX19_06433at 205.318 kb on + strand, within MPMX19_06433at 205.318 kb on + strand, within MPMX19_06433at 205.318 kb on + strand, within MPMX19_06433at 205.318 kb on + strand, within MPMX19_06433at 205.318 kb on + strand, within MPMX19_06433at 205.318 kb on + strand, within MPMX19_06433at 205.318 kb on + strand, within MPMX19_06433at 205.318 kb on + strand, within MPMX19_06433at 205.318 kb on + strand, within MPMX19_06433at 205.318 kb on + strand, within MPMX19_06433at 205.318 kb on + strand, within MPMX19_06433at 205.319 kb on - strand, within MPMX19_06433at 205.319 kb on - strand, within MPMX19_06433at 205.319 kb on - strand, within MPMX19_06433at 205.319 kb on - strand, within MPMX19_06433at 205.319 kb on - strand, within MPMX19_06433at 205.319 kb on - strand, within MPMX19_06433at 205.319 kb on - strand, within MPMX19_06433at 205.319 kb on - strand, within MPMX19_06433at 205.319 kb on - strand, within MPMX19_06433at 205.319 kb on - strand, within MPMX19_06433at 205.319 kb on - strand, within MPMX19_06433at 205.319 kb on - strand, within MPMX19_06433at 205.319 kb on - strand, within MPMX19_06433at 205.319 kb on - strand, within MPMX19_06433at 205.337 kb on + strand, within MPMX19_06433at 205.383 kb on + strand, within MPMX19_06433at 205.383 kb on + strand, within MPMX19_06433at 205.383 kb on + strand, within MPMX19_06433at 205.384 kb on - strand, within MPMX19_06433at 205.384 kb on - strand, within MPMX19_06433at 205.384 kb on - strand, within MPMX19_06433at 205.384 kb on - strand, within MPMX19_06433at 205.429 kb on + strand, within MPMX19_06433at 205.429 kb on + strand, within MPMX19_06433at 205.429 kb on + strand, within MPMX19_06433at 205.430 kb on - strand, within MPMX19_06433at 205.430 kb on - strand, within MPMX19_06433at 205.430 kb on - strand, within MPMX19_06433at 205.430 kb on - strand, within MPMX19_06433at 205.451 kb on + strand, within MPMX19_06433at 205.452 kb on - strand, within MPMX19_06433at 205.452 kb on - strand, within MPMX19_06433at 205.626 kb on + strand, within MPMX19_06433at 205.626 kb on + strand, within MPMX19_06433at 205.626 kb on + strand, within MPMX19_06433at 205.626 kb on + strand, within MPMX19_06433at 205.626 kb on + strand, within MPMX19_06433at 205.627 kb on - strand, within MPMX19_06433at 205.627 kb on - strand, within MPMX19_06433at 205.627 kb on - strand, within MPMX19_06433at 205.627 kb on - strand, within MPMX19_06433at 205.627 kb on - strand, within MPMX19_06433at 205.627 kb on - strand, within MPMX19_06433at 205.627 kb on - strand, within MPMX19_06433

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Per-strain Table

Position Strand Gene LocusTag Fraction NF
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203,404 + MPMX19_06430 0.67 -1.5
203,404 + MPMX19_06430 0.67 +0.7
203,404 + MPMX19_06430 0.67 +0.5
203,404 + MPMX19_06430 0.67 +0.7
203,404 + MPMX19_06430 0.67 -0.5
203,405 - MPMX19_06430 0.67 -1.4
203,405 - MPMX19_06430 0.67 -2.2
203,405 - MPMX19_06430 0.67 -1.1
203,449 + MPMX19_06430 0.69 +0.7
203,449 + MPMX19_06430 0.69 -0.4
203,449 + MPMX19_06430 0.69 +1.4
203,449 + MPMX19_06430 0.69 +0.8
203,449 + MPMX19_06430 0.69 -0.5
203,449 + MPMX19_06430 0.69 -0.9
203,449 + MPMX19_06430 0.69 -0.5
203,449 + MPMX19_06430 0.69 +0.2
203,449 + MPMX19_06430 0.69 +0.1
203,449 + MPMX19_06430 0.69 -1.0
203,449 + MPMX19_06430 0.69 -0.5
203,449 + MPMX19_06430 0.69 -1.1
203,449 + MPMX19_06430 0.69 -0.2
203,449 + MPMX19_06430 0.69 +0.6
203,449 + MPMX19_06430 0.69 -0.1
203,449 + MPMX19_06430 0.69 +0.7
203,449 + MPMX19_06430 0.69 -0.3
203,449 + MPMX19_06430 0.69 -0.1
203,449 + MPMX19_06430 0.69 -0.5
203,449 + MPMX19_06430 0.69 -0.0
203,449 + MPMX19_06430 0.69 +0.5
203,449 + MPMX19_06430 0.69 -1.5
203,449 + MPMX19_06430 0.69 +0.1
203,449 + MPMX19_06430 0.69 -0.1
203,449 + MPMX19_06430 0.69 -1.7
203,449 + MPMX19_06430 0.69 +0.3
203,449 + MPMX19_06430 0.69 -0.0
203,449 + MPMX19_06430 0.69 -0.7
203,449 + MPMX19_06430 0.69 -0.6
203,449 + MPMX19_06430 0.69 +0.1
203,450 - MPMX19_06430 0.69 +0.8
203,450 - MPMX19_06430 0.69 +0.1
203,450 - MPMX19_06430 0.69 -1.2
203,450 - MPMX19_06430 0.69 -1.8
203,450 - MPMX19_06430 0.69 +0.7
203,450 - MPMX19_06430 0.69 -0.2
203,450 - MPMX19_06430 0.69 -1.5
203,450 - MPMX19_06430 0.69 +0.5
203,450 - MPMX19_06430 0.69 -0.1
203,450 - MPMX19_06430 0.69 +0.4
203,450 - MPMX19_06430 0.69 -0.8
203,450 - MPMX19_06430 0.69 +1.4
203,450 - MPMX19_06430 0.69 +0.3
203,450 - MPMX19_06430 0.69 +0.4
203,450 - MPMX19_06430 0.69 -1.6
203,450 - MPMX19_06430 0.69 -0.2
203,450 - MPMX19_06430 0.69 +1.4
203,450 - MPMX19_06430 0.69 -0.1
203,450 - MPMX19_06430 0.69 -0.7
203,450 - MPMX19_06430 0.69 +0.1
203,450 - MPMX19_06430 0.69 -0.0
203,450 - MPMX19_06430 0.69 +0.8
203,450 - MPMX19_06430 0.69 +0.8
203,450 - MPMX19_06430 0.69 -0.4
203,450 - MPMX19_06430 0.69 -1.6
203,450 - MPMX19_06430 0.69 -1.1
203,450 - MPMX19_06430 0.69 -1.7
203,457 - MPMX19_06430 0.69 -0.2
203,502 - MPMX19_06430 0.71 +0.7
203,502 - MPMX19_06430 0.71 +1.1
203,502 - MPMX19_06430 0.71 -0.4
203,530 + MPMX19_06430 0.72 -0.4
203,530 + MPMX19_06430 0.72 -0.0
203,530 + MPMX19_06430 0.72 -1.7
203,531 - MPMX19_06430 0.73 -0.7
203,542 + MPMX19_06430 0.73 +0.0
203,543 - MPMX19_06430 0.73 -0.3
203,617 + MPMX19_06430 0.76 -1.6
203,618 - MPMX19_06430 0.76 -1.2
203,618 - MPMX19_06430 0.76 -1.1
203,618 - MPMX19_06430 0.76 -0.3
203,618 - MPMX19_06430 0.76 -0.6
203,618 - MPMX19_06430 0.76 -1.5
203,640 - MPMX19_06430 0.77 +0.8
203,640 - MPMX19_06430 0.77 -0.4
203,640 - MPMX19_06430 0.77 -0.8
203,761 + MPMX19_06430 0.82 -0.7
203,762 - MPMX19_06430 0.82 -0.8
203,918 + MPMX19_06430 0.88 -1.2
203,918 + MPMX19_06430 0.88 -0.9
203,918 + MPMX19_06430 0.88 -0.9
203,918 + MPMX19_06430 0.88 -0.5
203,918 + MPMX19_06430 0.88 -0.6
203,919 - MPMX19_06430 0.88 +0.6
203,959 + +0.2
204,054 + -2.7
204,055 - -0.7
204,055 - -0.2
204,055 - -0.9
204,055 - +0.2
204,219 + -1.7
204,219 + +0.3
204,219 + -1.6
204,219 + -1.9
204,219 + -1.1
204,220 - -0.8
204,220 - -1.2
204,220 - -1.2
204,220 - -1.1
204,388 + -1.0
204,388 + -0.3
204,388 + -1.6
204,389 - +1.1
204,389 - -0.1
204,389 - -1.9
204,389 - +0.7
204,389 - -1.2
204,389 - +0.2
204,389 - +0.5
204,738 + -0.4
204,738 + -0.7
204,738 + -0.1
204,739 - -0.1
204,739 - -0.3
204,739 - +0.2
204,740 + +0.4
204,740 + -2.4
204,740 + +0.6
204,740 + -0.5
204,740 + +1.7
204,740 + -0.4
204,740 + -0.1
204,740 + -1.0
204,740 + -1.2
204,740 + +0.0
204,740 + -0.6
204,741 - +0.2
204,741 - -1.3
204,741 - +1.1
204,741 - +1.3
204,741 - -0.5
204,741 - -0.6
204,741 - +0.3
204,741 - -0.9
204,741 - +0.3
204,741 - +2.1
204,741 - +1.0
204,741 - +0.2
205,056 - -0.1
205,056 - -0.9
205,056 - -1.8
205,056 - +1.0
205,072 + +0.4
205,073 - -0.2
205,073 - +1.2
205,106 + -0.6
205,106 + +0.3
205,106 + -1.2
205,106 + +0.2
205,107 - +0.4
205,107 - -0.6
205,144 - +0.3
205,152 + -1.0
205,194 + -1.5
205,194 + +0.4
205,194 + -0.7
205,195 - -0.2
205,195 - -0.7
205,318 + MPMX19_06433 0.11 -0.2
205,318 + MPMX19_06433 0.11 +0.3
205,318 + MPMX19_06433 0.11 -1.7
205,318 + MPMX19_06433 0.11 +1.8
205,318 + MPMX19_06433 0.11 -0.4
205,318 + MPMX19_06433 0.11 +0.5
205,318 + MPMX19_06433 0.11 -0.6
205,318 + MPMX19_06433 0.11 -1.1
205,318 + MPMX19_06433 0.11 +1.1
205,318 + MPMX19_06433 0.11 -0.0
205,318 + MPMX19_06433 0.11 -0.7
205,318 + MPMX19_06433 0.11 +0.0
205,318 + MPMX19_06433 0.11 +0.1
205,318 + MPMX19_06433 0.11 -0.2
205,318 + MPMX19_06433 0.11 -0.4
205,319 - MPMX19_06433 0.11 +0.5
205,319 - MPMX19_06433 0.11 +0.5
205,319 - MPMX19_06433 0.11 -1.3
205,319 - MPMX19_06433 0.11 -0.8
205,319 - MPMX19_06433 0.11 -1.4
205,319 - MPMX19_06433 0.11 -1.4
205,319 - MPMX19_06433 0.11 -1.3
205,319 - MPMX19_06433 0.11 -0.7
205,319 - MPMX19_06433 0.11 +0.3
205,319 - MPMX19_06433 0.11 -0.3
205,319 - MPMX19_06433 0.11 -0.2
205,319 - MPMX19_06433 0.11 +0.6
205,319 - MPMX19_06433 0.11 +0.4
205,319 - MPMX19_06433 0.11 +0.1
205,337 + MPMX19_06433 0.13 -0.2
205,383 + MPMX19_06433 0.20 +2.1
205,383 + MPMX19_06433 0.20 +1.1
205,383 + MPMX19_06433 0.20 +0.8
205,384 - MPMX19_06433 0.20 -0.2
205,384 - MPMX19_06433 0.20 +0.6
205,384 - MPMX19_06433 0.20 -0.7
205,384 - MPMX19_06433 0.20 +0.1
205,429 + MPMX19_06433 0.27 -0.9
205,429 + MPMX19_06433 0.27 +2.7
205,429 + MPMX19_06433 0.27 -0.3
205,430 - MPMX19_06433 0.27 +0.4
205,430 - MPMX19_06433 0.27 -1.7
205,430 - MPMX19_06433 0.27 +1.2
205,430 - MPMX19_06433 0.27 +0.7
205,451 + MPMX19_06433 0.30 -0.0
205,452 - MPMX19_06433 0.30 -1.4
205,452 - MPMX19_06433 0.30 -1.0
205,626 + MPMX19_06433 0.54 +0.1
205,626 + MPMX19_06433 0.54 +1.5
205,626 + MPMX19_06433 0.54 -0.7
205,626 + MPMX19_06433 0.54 -0.2
205,626 + MPMX19_06433 0.54 +0.2
205,627 - MPMX19_06433 0.55 -0.2
205,627 - MPMX19_06433 0.55 +0.2
205,627 - MPMX19_06433 0.55 -1.0
205,627 - MPMX19_06433 0.55 +0.4
205,627 - MPMX19_06433 0.55 +0.6
205,627 - MPMX19_06433 0.55 -1.1
205,627 - MPMX19_06433 0.55 -0.8

Or see this region's nucleotide sequence