Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06380 and MPMX19_06381 are separated by 425 nucleotides MPMX19_06381 and MPMX19_06382 are separated by 114 nucleotides
MPMX19_06380: MPMX19_06380 - hypothetical protein, at 148,706 to 149,218
_06380
MPMX19_06381: MPMX19_06381 - putative manganese efflux pump MntP, at 149,644 to 150,210
_06381
MPMX19_06382: MPMX19_06382 - putative MFS-type transporter YfcJ, at 150,325 to 151,506
_06382
Position (kb)
149
150
151 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 148.648 kb on + strand at 148.648 kb on + strand at 148.648 kb on + strand at 148.648 kb on + strand at 148.649 kb on - strand at 148.649 kb on - strand at 148.649 kb on - strand at 148.649 kb on - strand at 148.650 kb on + strand at 148.650 kb on + strand at 148.650 kb on + strand at 148.650 kb on + strand at 148.650 kb on + strand at 148.650 kb on + strand at 148.650 kb on + strand at 148.650 kb on + strand at 148.650 kb on + strand at 148.650 kb on + strand at 148.650 kb on + strand at 148.650 kb on + strand at 148.650 kb on + strand at 148.651 kb on - strand at 148.651 kb on - strand at 148.651 kb on - strand at 148.651 kb on - strand at 148.651 kb on - strand at 148.651 kb on - strand at 148.651 kb on - strand at 148.651 kb on - strand at 148.651 kb on - strand at 148.658 kb on + strand at 148.658 kb on + strand at 148.658 kb on + strand at 148.658 kb on + strand at 148.658 kb on + strand at 148.658 kb on + strand at 148.658 kb on + strand at 148.658 kb on + strand at 148.658 kb on + strand at 148.659 kb on - strand at 148.659 kb on - strand at 148.659 kb on - strand at 148.659 kb on - strand at 148.659 kb on - strand at 148.659 kb on - strand at 148.659 kb on - strand at 148.659 kb on - strand at 148.659 kb on - strand at 148.659 kb on - strand at 148.659 kb on - strand at 148.689 kb on + strand at 148.689 kb on + strand at 148.689 kb on + strand at 148.689 kb on + strand at 148.860 kb on - strand, within MPMX19_06380 at 148.860 kb on - strand, within MPMX19_06380 at 148.860 kb on - strand, within MPMX19_06380 at 148.964 kb on + strand, within MPMX19_06380 at 148.964 kb on + strand, within MPMX19_06380 at 148.965 kb on - strand, within MPMX19_06380 at 148.965 kb on - strand, within MPMX19_06380 at 148.965 kb on - strand, within MPMX19_06380 at 148.965 kb on - strand, within MPMX19_06380 at 148.965 kb on - strand, within MPMX19_06380 at 148.965 kb on - strand, within MPMX19_06380 at 148.966 kb on + strand, within MPMX19_06380 at 148.966 kb on + strand, within MPMX19_06380 at 148.966 kb on + strand, within MPMX19_06380 at 148.966 kb on + strand, within MPMX19_06380 at 148.966 kb on + strand, within MPMX19_06380 at 148.967 kb on - strand, within MPMX19_06380 at 148.967 kb on - strand, within MPMX19_06380 at 148.967 kb on - strand, within MPMX19_06380 at 148.967 kb on - strand, within MPMX19_06380 at 149.048 kb on + strand, within MPMX19_06380 at 149.048 kb on + strand, within MPMX19_06380 at 149.048 kb on + strand, within MPMX19_06380 at 149.048 kb on + strand, within MPMX19_06380 at 149.048 kb on + strand, within MPMX19_06380 at 149.048 kb on + strand, within MPMX19_06380 at 149.049 kb on - strand, within MPMX19_06380 at 149.049 kb on - strand, within MPMX19_06380 at 149.049 kb on - strand, within MPMX19_06380 at 149.049 kb on - strand, within MPMX19_06380 at 149.049 kb on - strand, within MPMX19_06380 at 149.049 kb on - strand, within MPMX19_06380 at 149.078 kb on + strand, within MPMX19_06380 at 149.078 kb on + strand, within MPMX19_06380 at 149.079 kb on - strand, within MPMX19_06380 at 149.234 kb on + strand at 149.234 kb on + strand at 149.235 kb on - strand at 149.235 kb on - strand at 149.235 kb on - strand at 149.318 kb on + strand at 149.319 kb on - strand at 149.371 kb on - strand at 149.375 kb on + strand at 149.389 kb on + strand at 149.453 kb on + strand at 149.453 kb on + strand at 149.461 kb on + strand at 149.483 kb on + strand at 149.483 kb on + strand at 149.483 kb on + strand at 149.483 kb on + strand at 149.484 kb on - strand at 149.666 kb on + strand at 149.666 kb on + strand at 149.666 kb on + strand at 150.009 kb on - strand, within MPMX19_06381 at 150.009 kb on - strand, within MPMX19_06381 at 150.286 kb on + strand at 150.341 kb on + strand at 150.567 kb on + strand, within MPMX19_06382 at 150.568 kb on + strand, within MPMX19_06382 at 150.568 kb on + strand, within MPMX19_06382 at 150.569 kb on - strand, within MPMX19_06382 at 150.569 kb on - strand, within MPMX19_06382 at 150.596 kb on + strand, within MPMX19_06382 at 150.597 kb on - strand, within MPMX19_06382 at 150.597 kb on - strand, within MPMX19_06382 at 150.597 kb on - strand, within MPMX19_06382 at 150.597 kb on - strand, within MPMX19_06382 at 151.066 kb on + strand, within MPMX19_06382 at 151.067 kb on - strand, within MPMX19_06382 at 151.067 kb on - strand, within MPMX19_06382 at 151.103 kb on - strand, within MPMX19_06382
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 148,648 + +0.8 148,648 + -0.5 148,648 + +0.4 148,648 + -0.6 148,649 - +0.4 148,649 - -0.6 148,649 - +0.3 148,649 - +0.1 148,650 + -0.8 148,650 + -0.5 148,650 + -0.6 148,650 + -0.3 148,650 + +0.3 148,650 + -0.1 148,650 + +0.9 148,650 + -0.5 148,650 + -1.1 148,650 + -0.4 148,650 + -1.4 148,650 + -1.1 148,650 + -0.7 148,651 - -1.7 148,651 - -0.0 148,651 - -0.8 148,651 - +1.0 148,651 - -0.3 148,651 - +1.1 148,651 - -0.1 148,651 - +0.5 148,651 - -1.8 148,658 + -0.0 148,658 + +1.2 148,658 + +1.8 148,658 + +0.2 148,658 + +1.6 148,658 + +0.1 148,658 + +0.8 148,658 + -0.4 148,658 + -0.8 148,659 - +1.4 148,659 - -1.3 148,659 - -0.6 148,659 - +0.0 148,659 - -0.5 148,659 - -1.9 148,659 - -0.8 148,659 - +0.1 148,659 - +1.8 148,659 - -0.5 148,659 - +0.1 148,689 + +1.4 148,689 + -0.3 148,689 + -0.7 148,689 + -1.2 148,860 - MPMX19_06380 0.30 +0.9 148,860 - MPMX19_06380 0.30 -0.2 148,860 - MPMX19_06380 0.30 -1.2 148,964 + MPMX19_06380 0.50 -1.8 148,964 + MPMX19_06380 0.50 -0.4 148,965 - MPMX19_06380 0.50 -0.3 148,965 - MPMX19_06380 0.50 +2.1 148,965 - MPMX19_06380 0.50 +0.2 148,965 - MPMX19_06380 0.50 -1.1 148,965 - MPMX19_06380 0.50 +1.1 148,965 - MPMX19_06380 0.50 +0.5 148,966 + MPMX19_06380 0.51 +0.1 148,966 + MPMX19_06380 0.51 -0.6 148,966 + MPMX19_06380 0.51 +0.4 148,966 + MPMX19_06380 0.51 +2.1 148,966 + MPMX19_06380 0.51 +0.6 148,967 - MPMX19_06380 0.51 +2.1 148,967 - MPMX19_06380 0.51 +2.1 148,967 - MPMX19_06380 0.51 -1.0 148,967 - MPMX19_06380 0.51 +0.4 149,048 + MPMX19_06380 0.67 -2.2 149,048 + MPMX19_06380 0.67 +0.4 149,048 + MPMX19_06380 0.67 +0.3 149,048 + MPMX19_06380 0.67 -1.4 149,048 + MPMX19_06380 0.67 -1.7 149,048 + MPMX19_06380 0.67 +0.4 149,049 - MPMX19_06380 0.67 +0.3 149,049 - MPMX19_06380 0.67 +0.4 149,049 - MPMX19_06380 0.67 +0.1 149,049 - MPMX19_06380 0.67 +0.5 149,049 - MPMX19_06380 0.67 -0.3 149,049 - MPMX19_06380 0.67 -0.5 149,078 + MPMX19_06380 0.73 +0.7 149,078 + MPMX19_06380 0.73 -1.7 149,079 - MPMX19_06380 0.73 +0.2 149,234 + -0.5 149,234 + -0.9 149,235 - -0.9 149,235 - -0.4 149,235 - -0.6 149,318 + +1.1 149,319 - +0.1 149,371 - -0.8 149,375 + -0.7 149,389 + -0.7 149,453 + +0.1 149,453 + +0.5 149,461 + -1.2 149,483 + +0.5 149,483 + -0.3 149,483 + -1.6 149,483 + -1.2 149,484 - -1.2 149,666 + +0.9 149,666 + +0.7 149,666 + +1.4 150,009 - MPMX19_06381 0.64 +0.5 150,009 - MPMX19_06381 0.64 -1.3 150,286 + -1.1 150,341 + -1.0 150,567 + MPMX19_06382 0.20 -1.4 150,568 + MPMX19_06382 0.21 -0.9 150,568 + MPMX19_06382 0.21 -2.2 150,569 - MPMX19_06382 0.21 -0.4 150,569 - MPMX19_06382 0.21 +1.1 150,596 + MPMX19_06382 0.23 -0.5 150,597 - MPMX19_06382 0.23 -2.2 150,597 - MPMX19_06382 0.23 -1.5 150,597 - MPMX19_06382 0.23 -0.9 150,597 - MPMX19_06382 0.23 -0.6 151,066 + MPMX19_06382 0.63 -0.7 151,067 - MPMX19_06382 0.63 +0.9 151,067 - MPMX19_06382 0.63 +0.7 151,103 - MPMX19_06382 0.66 -0.2
Or see this region's nucleotide sequence