Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06373 and MPMX19_06374 are separated by 133 nucleotides MPMX19_06374 and MPMX19_06375 are separated by 76 nucleotides MPMX19_06375 and MPMX19_06376 are separated by 576 nucleotides
MPMX19_06373: MPMX19_06373 - Lipoprotein signal peptidase, at 141,220 to 141,708
_06373
MPMX19_06374: MPMX19_06374 - HTH-type transcriptional regulator HmrR, at 141,842 to 142,264
_06374
MPMX19_06375: MPMX19_06375 - Zinc/cadmium/lead-transporting P-type ATPase, at 142,341 to 144,602
_06375
MPMX19_06376: MPMX19_06376 - Apolipoprotein N-acyltransferase, at 145,179 to 146,573
_06376
Position (kb) 142
143
144
145 Strain fitness (log2 ratio) -2
-1
0
1
2 at 141.606 kb on + strand, within MPMX19_06373 at 141.606 kb on + strand, within MPMX19_06373 at 141.606 kb on + strand, within MPMX19_06373 at 141.607 kb on - strand, within MPMX19_06373 at 141.607 kb on - strand, within MPMX19_06373 at 141.607 kb on - strand, within MPMX19_06373 at 141.664 kb on - strand at 141.664 kb on - strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.678 kb on - strand at 141.678 kb on - strand at 141.678 kb on - strand at 141.678 kb on - strand at 141.678 kb on - strand at 141.678 kb on - strand at 141.678 kb on - strand at 141.678 kb on - strand at 141.678 kb on - strand at 141.777 kb on + strand at 141.777 kb on + strand at 141.778 kb on - strand at 141.782 kb on + strand at 141.782 kb on + strand at 141.782 kb on + strand at 141.783 kb on - strand at 141.783 kb on - strand at 141.783 kb on - strand at 141.783 kb on - strand at 141.830 kb on + strand at 141.830 kb on + strand at 141.830 kb on + strand at 141.831 kb on - strand at 141.831 kb on - strand at 141.831 kb on - strand at 141.831 kb on - strand at 142.140 kb on + strand, within MPMX19_06374 at 142.140 kb on + strand, within MPMX19_06374 at 142.140 kb on + strand, within MPMX19_06374 at 142.140 kb on + strand, within MPMX19_06374 at 142.141 kb on - strand, within MPMX19_06374 at 142.141 kb on - strand, within MPMX19_06374 at 142.141 kb on - strand, within MPMX19_06374 at 142.141 kb on - strand, within MPMX19_06374 at 142.141 kb on - strand, within MPMX19_06374 at 142.141 kb on - strand, within MPMX19_06374 at 142.141 kb on - strand, within MPMX19_06374 at 142.197 kb on + strand, within MPMX19_06374 at 142.197 kb on + strand, within MPMX19_06374 at 142.197 kb on + strand, within MPMX19_06374 at 142.197 kb on + strand, within MPMX19_06374 at 142.197 kb on + strand, within MPMX19_06374 at 142.197 kb on + strand, within MPMX19_06374 at 142.197 kb on + strand, within MPMX19_06374 at 142.197 kb on + strand, within MPMX19_06374 at 142.198 kb on - strand, within MPMX19_06374 at 142.198 kb on - strand, within MPMX19_06374 at 142.198 kb on - strand, within MPMX19_06374 at 142.198 kb on - strand, within MPMX19_06374 at 142.198 kb on - strand, within MPMX19_06374 at 142.198 kb on - strand, within MPMX19_06374 at 142.200 kb on + strand, within MPMX19_06374 at 142.305 kb on + strand at 142.307 kb on - strand at 142.341 kb on - strand at 142.341 kb on - strand at 142.623 kb on - strand, within MPMX19_06375 at 142.623 kb on - strand, within MPMX19_06375 at 142.644 kb on + strand, within MPMX19_06375 at 142.645 kb on - strand, within MPMX19_06375 at 142.809 kb on + strand, within MPMX19_06375 at 142.809 kb on + strand, within MPMX19_06375 at 142.809 kb on + strand, within MPMX19_06375 at 142.809 kb on + strand, within MPMX19_06375 at 142.809 kb on + strand, within MPMX19_06375 at 142.810 kb on - strand, within MPMX19_06375 at 142.810 kb on - strand, within MPMX19_06375 at 142.810 kb on - strand, within MPMX19_06375 at 142.810 kb on - strand, within MPMX19_06375 at 142.810 kb on - strand, within MPMX19_06375 at 143.445 kb on + strand, within MPMX19_06375 at 143.445 kb on + strand, within MPMX19_06375 at 143.445 kb on + strand, within MPMX19_06375 at 143.445 kb on + strand, within MPMX19_06375 at 143.445 kb on + strand, within MPMX19_06375 at 143.446 kb on - strand, within MPMX19_06375 at 143.529 kb on + strand, within MPMX19_06375 at 143.529 kb on + strand, within MPMX19_06375 at 143.529 kb on + strand, within MPMX19_06375 at 143.529 kb on + strand, within MPMX19_06375 at 143.529 kb on + strand, within MPMX19_06375 at 143.529 kb on + strand, within MPMX19_06375 at 143.529 kb on + strand, within MPMX19_06375 at 143.529 kb on + strand, within MPMX19_06375 at 143.529 kb on + strand, within MPMX19_06375 at 143.529 kb on + strand, within MPMX19_06375 at 143.529 kb on + strand, within MPMX19_06375 at 143.529 kb on + strand, within MPMX19_06375 at 143.530 kb on - strand, within MPMX19_06375 at 143.530 kb on - strand, within MPMX19_06375 at 143.530 kb on - strand, within MPMX19_06375 at 143.530 kb on - strand, within MPMX19_06375 at 143.530 kb on - strand, within MPMX19_06375 at 143.530 kb on - strand, within MPMX19_06375 at 143.530 kb on - strand, within MPMX19_06375 at 143.530 kb on - strand, within MPMX19_06375 at 143.530 kb on - strand, within MPMX19_06375 at 143.530 kb on - strand, within MPMX19_06375 at 143.530 kb on - strand, within MPMX19_06375 at 143.530 kb on - strand, within MPMX19_06375 at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.675 kb on + strand at 144.676 kb on - strand at 144.676 kb on - strand at 144.676 kb on - strand at 144.676 kb on - strand at 144.676 kb on - strand at 144.676 kb on - strand at 144.676 kb on - strand at 144.676 kb on - strand at 144.676 kb on - strand at 144.676 kb on - strand at 144.676 kb on - strand at 144.676 kb on - strand at 144.676 kb on - strand at 144.676 kb on - strand at 144.676 kb on - strand at 144.676 kb on - strand at 144.676 kb on - strand at 144.676 kb on - strand at 144.676 kb on - strand at 144.676 kb on - strand at 144.734 kb on + strand at 144.734 kb on + strand at 144.734 kb on + strand at 144.734 kb on + strand at 144.756 kb on + strand at 144.756 kb on + strand at 144.757 kb on - strand at 144.757 kb on - strand at 144.806 kb on + strand at 144.807 kb on - strand at 144.841 kb on + strand at 144.841 kb on + strand at 144.841 kb on + strand at 144.842 kb on - strand at 144.842 kb on - strand at 144.983 kb on + strand at 144.983 kb on + strand at 144.983 kb on + strand at 144.983 kb on + strand at 144.983 kb on + strand at 144.983 kb on + strand at 144.983 kb on + strand at 144.983 kb on + strand at 144.983 kb on + strand at 144.983 kb on + strand at 144.983 kb on + strand at 144.983 kb on + strand at 144.983 kb on + strand at 144.983 kb on + strand at 144.983 kb on + strand at 144.983 kb on + strand at 144.983 kb on + strand at 144.983 kb on + strand at 144.983 kb on + strand at 144.983 kb on + strand at 144.984 kb on - strand at 144.984 kb on - strand at 144.984 kb on - strand at 144.984 kb on - strand at 144.984 kb on - strand at 144.984 kb on - strand at 144.984 kb on - strand at 144.984 kb on - strand at 144.984 kb on - strand at 144.984 kb on - strand at 144.984 kb on - strand at 144.984 kb on - strand at 144.984 kb on - strand at 144.984 kb on - strand at 144.984 kb on - strand at 144.984 kb on - strand at 144.984 kb on - strand at 144.984 kb on - strand at 144.984 kb on - strand at 144.984 kb on - strand at 144.984 kb on - strand at 144.984 kb on - strand at 144.984 kb on - strand at 144.984 kb on - strand at 144.984 kb on - strand at 144.984 kb on - strand at 145.273 kb on - strand at 145.273 kb on - strand at 145.273 kb on - strand at 145.273 kb on - strand at 145.318 kb on + strand at 145.318 kb on + strand at 145.318 kb on - strand at 145.319 kb on - strand, within MPMX19_06376 at 145.319 kb on - strand, within MPMX19_06376 at 145.319 kb on - strand, within MPMX19_06376 at 145.319 kb on - strand, within MPMX19_06376 at 145.319 kb on - strand, within MPMX19_06376 at 145.319 kb on - strand, within MPMX19_06376 at 145.402 kb on + strand, within MPMX19_06376 at 145.600 kb on + strand, within MPMX19_06376 at 145.600 kb on + strand, within MPMX19_06376 at 145.600 kb on + strand, within MPMX19_06376 at 145.600 kb on + strand, within MPMX19_06376 at 145.601 kb on - strand, within MPMX19_06376 at 145.601 kb on - strand, within MPMX19_06376 at 145.601 kb on - strand, within MPMX19_06376 at 145.601 kb on - strand, within MPMX19_06376
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 141,606 + MPMX19_06373 0.79 -2.6 141,606 + MPMX19_06373 0.79 -1.4 141,606 + MPMX19_06373 0.79 +1.4 141,607 - MPMX19_06373 0.79 -0.9 141,607 - MPMX19_06373 0.79 -0.2 141,607 - MPMX19_06373 0.79 -0.2 141,664 - +1.1 141,664 - +2.1 141,677 + +0.8 141,677 + -1.1 141,677 + -0.9 141,677 + -1.2 141,677 + -0.4 141,677 + -1.2 141,677 + -0.7 141,677 + -0.8 141,677 + +0.4 141,677 + -1.4 141,677 + +0.3 141,677 + +0.9 141,677 + -0.5 141,677 + -0.6 141,678 - +1.1 141,678 - -2.2 141,678 - -1.0 141,678 - -0.7 141,678 - -0.3 141,678 - -1.2 141,678 - +1.1 141,678 - +0.7 141,678 - -1.4 141,777 + -0.3 141,777 + -2.1 141,778 - +0.8 141,782 + -0.2 141,782 + +1.1 141,782 + +0.9 141,783 - -0.4 141,783 - +0.1 141,783 - -2.1 141,783 - -0.8 141,830 + -1.2 141,830 + +0.5 141,830 + -1.7 141,831 - +0.5 141,831 - -0.7 141,831 - -1.2 141,831 - -2.2 142,140 + MPMX19_06374 0.70 -0.9 142,140 + MPMX19_06374 0.70 -1.2 142,140 + MPMX19_06374 0.70 -1.2 142,140 + MPMX19_06374 0.70 +0.9 142,141 - MPMX19_06374 0.71 -0.9 142,141 - MPMX19_06374 0.71 -0.2 142,141 - MPMX19_06374 0.71 +1.4 142,141 - MPMX19_06374 0.71 -0.5 142,141 - MPMX19_06374 0.71 -0.7 142,141 - MPMX19_06374 0.71 -0.1 142,141 - MPMX19_06374 0.71 +0.1 142,197 + MPMX19_06374 0.84 +0.5 142,197 + MPMX19_06374 0.84 -0.5 142,197 + MPMX19_06374 0.84 -0.2 142,197 + MPMX19_06374 0.84 +0.8 142,197 + MPMX19_06374 0.84 -2.2 142,197 + MPMX19_06374 0.84 +1.5 142,197 + MPMX19_06374 0.84 -0.6 142,197 + MPMX19_06374 0.84 -2.4 142,198 - MPMX19_06374 0.84 -0.4 142,198 - MPMX19_06374 0.84 +1.1 142,198 - MPMX19_06374 0.84 -0.2 142,198 - MPMX19_06374 0.84 -0.7 142,198 - MPMX19_06374 0.84 -0.9 142,198 - MPMX19_06374 0.84 -0.4 142,200 + MPMX19_06374 0.85 -0.9 142,305 + -1.3 142,307 - +0.5 142,341 - -2.2 142,341 - -1.1 142,623 - MPMX19_06375 0.12 -0.5 142,623 - MPMX19_06375 0.12 +1.0 142,644 + MPMX19_06375 0.13 -0.8 142,645 - MPMX19_06375 0.13 +0.5 142,809 + MPMX19_06375 0.21 +1.1 142,809 + MPMX19_06375 0.21 +1.5 142,809 + MPMX19_06375 0.21 +0.3 142,809 + MPMX19_06375 0.21 -1.1 142,809 + MPMX19_06375 0.21 -1.8 142,810 - MPMX19_06375 0.21 -0.2 142,810 - MPMX19_06375 0.21 -1.5 142,810 - MPMX19_06375 0.21 +0.4 142,810 - MPMX19_06375 0.21 -0.2 142,810 - MPMX19_06375 0.21 -1.1 143,445 + MPMX19_06375 0.49 -1.7 143,445 + MPMX19_06375 0.49 -0.1 143,445 + MPMX19_06375 0.49 -0.7 143,445 + MPMX19_06375 0.49 -1.5 143,445 + MPMX19_06375 0.49 -1.8 143,446 - MPMX19_06375 0.49 -0.2 143,529 + MPMX19_06375 0.53 -1.8 143,529 + MPMX19_06375 0.53 -0.6 143,529 + MPMX19_06375 0.53 -1.6 143,529 + MPMX19_06375 0.53 -0.7 143,529 + MPMX19_06375 0.53 -1.1 143,529 + MPMX19_06375 0.53 -0.9 143,529 + MPMX19_06375 0.53 -1.7 143,529 + MPMX19_06375 0.53 -0.1 143,529 + MPMX19_06375 0.53 -0.9 143,529 + MPMX19_06375 0.53 -0.8 143,529 + MPMX19_06375 0.53 +1.2 143,529 + MPMX19_06375 0.53 -0.1 143,530 - MPMX19_06375 0.53 +1.1 143,530 - MPMX19_06375 0.53 +0.3 143,530 - MPMX19_06375 0.53 -1.1 143,530 - MPMX19_06375 0.53 -0.0 143,530 - MPMX19_06375 0.53 -1.2 143,530 - MPMX19_06375 0.53 +1.1 143,530 - MPMX19_06375 0.53 -1.4 143,530 - MPMX19_06375 0.53 -1.2 143,530 - MPMX19_06375 0.53 +0.1 143,530 - MPMX19_06375 0.53 -0.3 143,530 - MPMX19_06375 0.53 +0.6 143,530 - MPMX19_06375 0.53 -0.6 144,675 + +0.7 144,675 + -0.7 144,675 + -0.8 144,675 + -0.8 144,675 + +0.2 144,675 + -0.2 144,675 + -0.2 144,675 + +2.1 144,675 + +1.5 144,675 + -0.1 144,675 + -0.2 144,675 + -0.9 144,675 + +1.1 144,675 + -0.9 144,675 + -1.1 144,675 + +0.1 144,675 + -2.0 144,675 + -0.8 144,675 + -0.8 144,675 + -0.2 144,675 + +0.1 144,675 + +0.0 144,675 + -0.3 144,675 + +0.3 144,675 + +0.1 144,675 + -0.5 144,675 + +0.1 144,675 + -1.1 144,676 - +0.0 144,676 - +2.1 144,676 - +1.4 144,676 - -2.1 144,676 - -0.5 144,676 - +0.3 144,676 - +0.2 144,676 - -0.2 144,676 - -1.2 144,676 - -0.6 144,676 - +0.9 144,676 - +0.8 144,676 - -0.2 144,676 - -0.5 144,676 - -0.7 144,676 - +1.4 144,676 - -0.6 144,676 - -0.3 144,676 - -0.5 144,676 - -0.1 144,734 + +0.5 144,734 + +0.7 144,734 + -1.2 144,734 + -0.2 144,756 + -0.6 144,756 + -0.5 144,757 - -2.2 144,757 - +0.5 144,806 + -0.2 144,807 - -0.7 144,841 + -1.3 144,841 + -0.9 144,841 + -2.5 144,842 - +0.8 144,842 - -1.4 144,983 + -0.1 144,983 + -1.1 144,983 + -1.2 144,983 + +0.8 144,983 + -0.0 144,983 + -0.1 144,983 + +0.2 144,983 + +0.1 144,983 + -0.5 144,983 + -1.4 144,983 + +0.7 144,983 + -1.0 144,983 + +0.4 144,983 + +0.4 144,983 + -2.5 144,983 + +0.2 144,983 + +2.0 144,983 + -0.5 144,983 + -0.7 144,983 + -1.1 144,984 - -0.2 144,984 - -1.4 144,984 - -0.2 144,984 - -1.1 144,984 - +0.1 144,984 - -1.1 144,984 - -0.5 144,984 - -0.5 144,984 - -1.2 144,984 - -0.9 144,984 - +0.3 144,984 - -0.1 144,984 - -0.2 144,984 - -0.8 144,984 - -0.6 144,984 - +0.6 144,984 - +0.3 144,984 - -1.4 144,984 - +0.3 144,984 - -0.3 144,984 - -0.1 144,984 - -0.4 144,984 - +0.5 144,984 - -0.9 144,984 - -0.7 144,984 - -1.0 145,273 - +0.8 145,273 - +2.1 145,273 - +0.9 145,273 - -0.2 145,318 + -1.0 145,318 + -1.8 145,318 - -0.5 145,319 - MPMX19_06376 0.10 +0.3 145,319 - MPMX19_06376 0.10 -0.7 145,319 - MPMX19_06376 0.10 +1.4 145,319 - MPMX19_06376 0.10 +0.1 145,319 - MPMX19_06376 0.10 +0.9 145,319 - MPMX19_06376 0.10 -0.8 145,402 + MPMX19_06376 0.16 -1.8 145,600 + MPMX19_06376 0.30 +0.1 145,600 + MPMX19_06376 0.30 -0.2 145,600 + MPMX19_06376 0.30 -1.1 145,600 + MPMX19_06376 0.30 -0.8 145,601 - MPMX19_06376 0.30 +1.1 145,601 - MPMX19_06376 0.30 -0.8 145,601 - MPMX19_06376 0.30 -0.1 145,601 - MPMX19_06376 0.30 +1.0
Or see this region's nucleotide sequence