Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06354 and MPMX19_06355 are separated by 881 nucleotides MPMX19_06355 and MPMX19_06356 overlap by 16 nucleotides
MPMX19_06354: MPMX19_06354 - Methyl-accepting chemotaxis protein, at 119,556 to 121,403
_06354
MPMX19_06355: MPMX19_06355 - hypothetical protein, at 122,285 to 122,623
_06355
MPMX19_06356: MPMX19_06356 - hypothetical protein, at 122,608 to 123,846
_06356
Position (kb)
122
123 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 121.564 kb on + strand at 121.564 kb on + strand at 121.643 kb on - strand at 121.741 kb on + strand at 121.742 kb on - strand at 121.820 kb on + strand at 121.820 kb on + strand at 121.820 kb on + strand at 121.820 kb on + strand at 121.821 kb on - strand at 121.821 kb on - strand at 121.821 kb on - strand at 121.821 kb on - strand at 121.821 kb on - strand at 121.841 kb on + strand at 121.841 kb on + strand at 121.841 kb on + strand at 121.842 kb on - strand at 121.923 kb on + strand at 121.923 kb on + strand at 121.923 kb on + strand at 122.195 kb on + strand at 122.195 kb on + strand at 122.196 kb on - strand at 122.196 kb on - strand at 122.196 kb on - strand at 122.196 kb on - strand at 122.354 kb on + strand, within MPMX19_06355 at 122.354 kb on + strand, within MPMX19_06355 at 122.354 kb on + strand, within MPMX19_06355 at 122.354 kb on + strand, within MPMX19_06355 at 122.354 kb on + strand, within MPMX19_06355 at 122.354 kb on + strand, within MPMX19_06355 at 122.354 kb on + strand, within MPMX19_06355 at 122.354 kb on + strand, within MPMX19_06355 at 122.354 kb on + strand, within MPMX19_06355 at 122.354 kb on + strand, within MPMX19_06355 at 122.355 kb on - strand, within MPMX19_06355 at 122.355 kb on - strand, within MPMX19_06355 at 122.355 kb on - strand, within MPMX19_06355 at 122.355 kb on - strand, within MPMX19_06355 at 122.355 kb on - strand, within MPMX19_06355 at 122.519 kb on + strand, within MPMX19_06355 at 122.520 kb on - strand, within MPMX19_06355 at 122.581 kb on - strand, within MPMX19_06355 at 122.711 kb on + strand at 122.711 kb on + strand at 122.711 kb on + strand at 122.711 kb on + strand at 122.711 kb on + strand at 122.711 kb on + strand at 122.711 kb on + strand at 122.711 kb on + strand at 122.711 kb on + strand at 122.711 kb on + strand at 122.711 kb on + strand at 122.711 kb on + strand at 122.712 kb on - strand at 122.712 kb on - strand at 122.712 kb on - strand at 122.712 kb on - strand at 122.712 kb on - strand at 122.712 kb on - strand at 122.712 kb on - strand at 122.712 kb on - strand at 122.712 kb on - strand at 122.712 kb on - strand at 122.712 kb on - strand at 122.712 kb on - strand at 122.807 kb on + strand, within MPMX19_06356 at 122.808 kb on - strand, within MPMX19_06356 at 122.808 kb on - strand, within MPMX19_06356 at 122.808 kb on - strand, within MPMX19_06356 at 122.879 kb on + strand, within MPMX19_06356 at 122.879 kb on + strand, within MPMX19_06356 at 122.879 kb on + strand, within MPMX19_06356 at 122.880 kb on - strand, within MPMX19_06356 at 122.880 kb on - strand, within MPMX19_06356 at 122.880 kb on - strand, within MPMX19_06356 at 122.880 kb on - strand, within MPMX19_06356 at 123.104 kb on + strand, within MPMX19_06356 at 123.104 kb on + strand, within MPMX19_06356 at 123.104 kb on + strand, within MPMX19_06356 at 123.105 kb on - strand, within MPMX19_06356 at 123.105 kb on - strand, within MPMX19_06356 at 123.137 kb on + strand, within MPMX19_06356 at 123.137 kb on + strand, within MPMX19_06356 at 123.137 kb on + strand, within MPMX19_06356 at 123.137 kb on + strand, within MPMX19_06356 at 123.137 kb on + strand, within MPMX19_06356 at 123.138 kb on - strand, within MPMX19_06356 at 123.138 kb on - strand, within MPMX19_06356 at 123.138 kb on - strand, within MPMX19_06356 at 123.138 kb on - strand, within MPMX19_06356 at 123.138 kb on - strand, within MPMX19_06356 at 123.140 kb on + strand, within MPMX19_06356 at 123.140 kb on + strand, within MPMX19_06356 at 123.140 kb on + strand, within MPMX19_06356 at 123.141 kb on - strand, within MPMX19_06356 at 123.141 kb on - strand, within MPMX19_06356 at 123.318 kb on + strand, within MPMX19_06356 at 123.431 kb on + strand, within MPMX19_06356 at 123.464 kb on + strand, within MPMX19_06356 at 123.464 kb on + strand, within MPMX19_06356 at 123.464 kb on + strand, within MPMX19_06356 at 123.464 kb on + strand, within MPMX19_06356 at 123.464 kb on + strand, within MPMX19_06356 at 123.464 kb on + strand, within MPMX19_06356 at 123.464 kb on + strand, within MPMX19_06356 at 123.464 kb on + strand, within MPMX19_06356 at 123.464 kb on + strand, within MPMX19_06356 at 123.464 kb on + strand, within MPMX19_06356 at 123.464 kb on + strand, within MPMX19_06356 at 123.464 kb on + strand, within MPMX19_06356 at 123.464 kb on + strand, within MPMX19_06356 at 123.465 kb on - strand, within MPMX19_06356 at 123.465 kb on - strand, within MPMX19_06356 at 123.465 kb on - strand, within MPMX19_06356 at 123.465 kb on - strand, within MPMX19_06356 at 123.465 kb on - strand, within MPMX19_06356 at 123.465 kb on - strand, within MPMX19_06356 at 123.465 kb on - strand, within MPMX19_06356 at 123.465 kb on - strand, within MPMX19_06356
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 121,564 + +0.9 121,564 + +0.3 121,643 - -1.2 121,741 + +0.5 121,742 - -0.4 121,820 + -0.2 121,820 + +0.5 121,820 + -1.1 121,820 + -0.0 121,821 - +0.4 121,821 - -1.4 121,821 - -0.7 121,821 - +0.8 121,821 - -0.1 121,841 + +0.1 121,841 + -0.8 121,841 + -0.1 121,842 - +0.4 121,923 + +1.7 121,923 + -0.2 121,923 + +0.3 122,195 + -0.2 122,195 + -1.2 122,196 - +0.4 122,196 - -0.9 122,196 - +0.4 122,196 - +0.4 122,354 + MPMX19_06355 0.20 +1.3 122,354 + MPMX19_06355 0.20 +0.9 122,354 + MPMX19_06355 0.20 -0.1 122,354 + MPMX19_06355 0.20 +0.8 122,354 + MPMX19_06355 0.20 +0.1 122,354 + MPMX19_06355 0.20 +0.2 122,354 + MPMX19_06355 0.20 -0.5 122,354 + MPMX19_06355 0.20 -0.7 122,354 + MPMX19_06355 0.20 -1.1 122,354 + MPMX19_06355 0.20 +0.2 122,355 - MPMX19_06355 0.21 -0.4 122,355 - MPMX19_06355 0.21 +0.7 122,355 - MPMX19_06355 0.21 +1.4 122,355 - MPMX19_06355 0.21 -0.9 122,355 - MPMX19_06355 0.21 +0.1 122,519 + MPMX19_06355 0.69 -0.2 122,520 - MPMX19_06355 0.69 +0.9 122,581 - MPMX19_06355 0.87 -0.7 122,711 + -0.5 122,711 + +0.9 122,711 + -0.1 122,711 + +0.3 122,711 + -0.1 122,711 + -0.8 122,711 + -1.0 122,711 + -1.8 122,711 + +0.2 122,711 + -0.3 122,711 + -0.8 122,711 + -2.5 122,712 - +1.2 122,712 - -0.4 122,712 - -0.8 122,712 - -1.4 122,712 - -1.1 122,712 - +0.4 122,712 - -1.0 122,712 - +1.3 122,712 - +0.1 122,712 - +0.1 122,712 - +0.5 122,712 - +0.1 122,807 + MPMX19_06356 0.16 -0.5 122,808 - MPMX19_06356 0.16 -0.4 122,808 - MPMX19_06356 0.16 -1.4 122,808 - MPMX19_06356 0.16 -2.4 122,879 + MPMX19_06356 0.22 +1.1 122,879 + MPMX19_06356 0.22 -1.0 122,879 + MPMX19_06356 0.22 -0.4 122,880 - MPMX19_06356 0.22 -1.1 122,880 - MPMX19_06356 0.22 -1.6 122,880 - MPMX19_06356 0.22 -0.8 122,880 - MPMX19_06356 0.22 -0.2 123,104 + MPMX19_06356 0.40 +0.1 123,104 + MPMX19_06356 0.40 -0.3 123,104 + MPMX19_06356 0.40 -0.4 123,105 - MPMX19_06356 0.40 -0.2 123,105 - MPMX19_06356 0.40 -1.0 123,137 + MPMX19_06356 0.43 +0.5 123,137 + MPMX19_06356 0.43 +1.1 123,137 + MPMX19_06356 0.43 -1.4 123,137 + MPMX19_06356 0.43 -0.9 123,137 + MPMX19_06356 0.43 +1.8 123,138 - MPMX19_06356 0.43 +0.2 123,138 - MPMX19_06356 0.43 +0.6 123,138 - MPMX19_06356 0.43 -0.7 123,138 - MPMX19_06356 0.43 +0.3 123,138 - MPMX19_06356 0.43 +0.0 123,140 + MPMX19_06356 0.43 +0.3 123,140 + MPMX19_06356 0.43 +1.1 123,140 + MPMX19_06356 0.43 +0.1 123,141 - MPMX19_06356 0.43 +0.5 123,141 - MPMX19_06356 0.43 -0.8 123,318 + MPMX19_06356 0.57 +1.3 123,431 + MPMX19_06356 0.66 -1.0 123,464 + MPMX19_06356 0.69 +0.9 123,464 + MPMX19_06356 0.69 -0.1 123,464 + MPMX19_06356 0.69 +2.3 123,464 + MPMX19_06356 0.69 +0.1 123,464 + MPMX19_06356 0.69 -0.2 123,464 + MPMX19_06356 0.69 +1.1 123,464 + MPMX19_06356 0.69 +0.0 123,464 + MPMX19_06356 0.69 -0.2 123,464 + MPMX19_06356 0.69 +1.9 123,464 + MPMX19_06356 0.69 +0.7 123,464 + MPMX19_06356 0.69 -1.4 123,464 + MPMX19_06356 0.69 -0.9 123,464 + MPMX19_06356 0.69 -0.4 123,465 - MPMX19_06356 0.69 -0.6 123,465 - MPMX19_06356 0.69 -0.9 123,465 - MPMX19_06356 0.69 -0.7 123,465 - MPMX19_06356 0.69 -0.4 123,465 - MPMX19_06356 0.69 +0.8 123,465 - MPMX19_06356 0.69 -0.8 123,465 - MPMX19_06356 0.69 -0.1 123,465 - MPMX19_06356 0.69 +0.3
Or see this region's nucleotide sequence