Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06348 and MPMX19_06349 are separated by 42 nucleotides MPMX19_06349 and MPMX19_06350 overlap by 8 nucleotides MPMX19_06350 and MPMX19_06351 are separated by 12 nucleotides MPMX19_06351 and MPMX19_06352 overlap by 4 nucleotides
MPMX19_06348: MPMX19_06348 - NADPH-Fe(3+) oxidoreductase subunit beta, at 113,936 to 115,570
_06348
MPMX19_06349: MPMX19_06349 - NADPH-dependent FMN reductase ArsH, at 115,613 to 116,374
_06349
MPMX19_06350: MPMX19_06350 - Arsenical-resistance protein Acr3, at 116,367 to 117,440
_06350
MPMX19_06351: MPMX19_06351 - Arsenate reductase, at 117,453 to 117,887
_06351
MPMX19_06352: MPMX19_06352 - Arsenate reductase, at 117,884 to 118,402
_06352
Position (kb)
116
117
118 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 115.490 kb on + strand at 115.568 kb on + strand at 115.568 kb on + strand at 115.569 kb on - strand at 115.569 kb on - strand at 115.569 kb on - strand at 115.580 kb on + strand at 115.580 kb on + strand at 115.580 kb on + strand at 115.580 kb on + strand at 115.580 kb on + strand at 115.581 kb on - strand at 115.581 kb on - strand at 115.614 kb on + strand at 115.702 kb on - strand, within MPMX19_06349 at 115.716 kb on + strand, within MPMX19_06349 at 115.716 kb on + strand, within MPMX19_06349 at 115.717 kb on - strand, within MPMX19_06349 at 115.717 kb on - strand, within MPMX19_06349 at 115.754 kb on + strand, within MPMX19_06349 at 115.754 kb on + strand, within MPMX19_06349 at 115.754 kb on + strand, within MPMX19_06349 at 115.754 kb on + strand, within MPMX19_06349 at 115.754 kb on + strand, within MPMX19_06349 at 115.754 kb on + strand, within MPMX19_06349 at 115.754 kb on + strand, within MPMX19_06349 at 115.754 kb on + strand, within MPMX19_06349 at 115.754 kb on + strand, within MPMX19_06349 at 115.754 kb on + strand, within MPMX19_06349 at 115.755 kb on - strand, within MPMX19_06349 at 115.755 kb on - strand, within MPMX19_06349 at 115.755 kb on - strand, within MPMX19_06349 at 115.755 kb on - strand, within MPMX19_06349 at 115.755 kb on - strand, within MPMX19_06349 at 115.755 kb on - strand, within MPMX19_06349 at 115.785 kb on + strand, within MPMX19_06349 at 115.785 kb on + strand, within MPMX19_06349 at 115.785 kb on + strand, within MPMX19_06349 at 115.785 kb on + strand, within MPMX19_06349 at 115.785 kb on + strand, within MPMX19_06349 at 115.786 kb on - strand, within MPMX19_06349 at 115.786 kb on - strand, within MPMX19_06349 at 115.786 kb on - strand, within MPMX19_06349 at 115.786 kb on - strand, within MPMX19_06349 at 115.786 kb on - strand, within MPMX19_06349 at 115.786 kb on - strand, within MPMX19_06349 at 115.788 kb on + strand, within MPMX19_06349 at 116.220 kb on + strand, within MPMX19_06349 at 116.220 kb on + strand, within MPMX19_06349 at 116.220 kb on + strand, within MPMX19_06349 at 116.220 kb on + strand, within MPMX19_06349 at 116.220 kb on + strand, within MPMX19_06349 at 116.220 kb on + strand, within MPMX19_06349 at 116.220 kb on + strand, within MPMX19_06349 at 116.220 kb on + strand, within MPMX19_06349 at 116.221 kb on - strand, within MPMX19_06349 at 116.221 kb on - strand, within MPMX19_06349 at 116.221 kb on - strand, within MPMX19_06349 at 116.221 kb on - strand, within MPMX19_06349 at 116.244 kb on + strand, within MPMX19_06349 at 116.244 kb on + strand, within MPMX19_06349 at 116.244 kb on + strand, within MPMX19_06349 at 116.245 kb on - strand, within MPMX19_06349 at 116.319 kb on + strand at 116.319 kb on + strand at 116.319 kb on + strand at 116.320 kb on - strand at 116.320 kb on - strand at 116.320 kb on - strand at 116.320 kb on - strand at 116.320 kb on - strand at 116.320 kb on - strand at 116.389 kb on + strand at 116.390 kb on - strand at 116.602 kb on + strand, within MPMX19_06350 at 116.602 kb on + strand, within MPMX19_06350 at 116.602 kb on + strand, within MPMX19_06350 at 116.603 kb on - strand, within MPMX19_06350 at 116.603 kb on - strand, within MPMX19_06350 at 116.624 kb on - strand, within MPMX19_06350 at 116.624 kb on - strand, within MPMX19_06350 at 116.762 kb on + strand, within MPMX19_06350 at 116.763 kb on - strand, within MPMX19_06350 at 116.843 kb on - strand, within MPMX19_06350 at 116.843 kb on - strand, within MPMX19_06350 at 116.843 kb on - strand, within MPMX19_06350 at 116.843 kb on - strand, within MPMX19_06350 at 116.971 kb on + strand, within MPMX19_06350 at 116.972 kb on - strand, within MPMX19_06350 at 116.972 kb on - strand, within MPMX19_06350 at 116.972 kb on - strand, within MPMX19_06350 at 117.379 kb on + strand at 117.379 kb on + strand at 117.379 kb on + strand at 117.379 kb on + strand at 117.379 kb on + strand at 117.380 kb on - strand at 117.380 kb on - strand at 117.787 kb on + strand, within MPMX19_06351 at 117.787 kb on + strand, within MPMX19_06351 at 117.787 kb on + strand, within MPMX19_06351 at 117.788 kb on - strand, within MPMX19_06351 at 117.788 kb on - strand, within MPMX19_06351 at 117.868 kb on + strand at 117.868 kb on + strand at 117.868 kb on + strand at 117.868 kb on + strand at 117.868 kb on + strand at 117.868 kb on + strand at 117.868 kb on + strand at 117.868 kb on + strand at 117.868 kb on + strand at 117.868 kb on + strand at 117.868 kb on + strand at 117.868 kb on + strand at 117.868 kb on + strand at 117.868 kb on + strand at 117.869 kb on - strand at 117.869 kb on - strand at 117.869 kb on - strand at 117.869 kb on - strand at 117.869 kb on - strand at 117.869 kb on - strand at 117.869 kb on - strand at 117.869 kb on - strand at 117.869 kb on - strand at 117.869 kb on - strand at 117.923 kb on - strand at 117.991 kb on + strand, within MPMX19_06352 at 118.386 kb on + strand at 118.387 kb on - strand at 118.387 kb on - strand at 118.387 kb on - strand at 118.387 kb on - strand at 118.387 kb on - strand at 118.387 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 115,490 + -0.7 115,568 + -0.0 115,568 + +0.4 115,569 - -1.1 115,569 - -0.0 115,569 - -0.2 115,580 + -1.2 115,580 + +0.5 115,580 + -1.4 115,580 + +0.3 115,580 + -0.5 115,581 - -1.2 115,581 - -0.4 115,614 + +1.1 115,702 - MPMX19_06349 0.12 -0.9 115,716 + MPMX19_06349 0.14 -1.5 115,716 + MPMX19_06349 0.14 -0.2 115,717 - MPMX19_06349 0.14 -0.1 115,717 - MPMX19_06349 0.14 +0.4 115,754 + MPMX19_06349 0.19 +0.2 115,754 + MPMX19_06349 0.19 -1.1 115,754 + MPMX19_06349 0.19 +0.6 115,754 + MPMX19_06349 0.19 -1.0 115,754 + MPMX19_06349 0.19 -0.3 115,754 + MPMX19_06349 0.19 -0.5 115,754 + MPMX19_06349 0.19 -1.1 115,754 + MPMX19_06349 0.19 -0.0 115,754 + MPMX19_06349 0.19 -0.5 115,754 + MPMX19_06349 0.19 +0.5 115,755 - MPMX19_06349 0.19 -1.5 115,755 - MPMX19_06349 0.19 -0.6 115,755 - MPMX19_06349 0.19 -0.2 115,755 - MPMX19_06349 0.19 -0.3 115,755 - MPMX19_06349 0.19 -0.8 115,755 - MPMX19_06349 0.19 +0.5 115,785 + MPMX19_06349 0.23 -1.1 115,785 + MPMX19_06349 0.23 -2.2 115,785 + MPMX19_06349 0.23 +0.2 115,785 + MPMX19_06349 0.23 +0.8 115,785 + MPMX19_06349 0.23 -0.4 115,786 - MPMX19_06349 0.23 -2.2 115,786 - MPMX19_06349 0.23 +0.4 115,786 - MPMX19_06349 0.23 -0.3 115,786 - MPMX19_06349 0.23 +0.0 115,786 - MPMX19_06349 0.23 +1.0 115,786 - MPMX19_06349 0.23 +0.6 115,788 + MPMX19_06349 0.23 -1.1 116,220 + MPMX19_06349 0.80 -0.4 116,220 + MPMX19_06349 0.80 -0.7 116,220 + MPMX19_06349 0.80 +0.8 116,220 + MPMX19_06349 0.80 -0.3 116,220 + MPMX19_06349 0.80 -1.1 116,220 + MPMX19_06349 0.80 +0.5 116,220 + MPMX19_06349 0.80 -0.8 116,220 + MPMX19_06349 0.80 +0.4 116,221 - MPMX19_06349 0.80 -1.2 116,221 - MPMX19_06349 0.80 -0.8 116,221 - MPMX19_06349 0.80 -1.1 116,221 - MPMX19_06349 0.80 -3.4 116,244 + MPMX19_06349 0.83 -1.4 116,244 + MPMX19_06349 0.83 +0.7 116,244 + MPMX19_06349 0.83 -0.9 116,245 - MPMX19_06349 0.83 +0.4 116,319 + +0.5 116,319 + +0.9 116,319 + -0.7 116,320 - +0.1 116,320 - -1.2 116,320 - -0.1 116,320 - -0.4 116,320 - +0.6 116,320 - -0.7 116,389 + +0.6 116,390 - +0.4 116,602 + MPMX19_06350 0.22 -1.4 116,602 + MPMX19_06350 0.22 +0.3 116,602 + MPMX19_06350 0.22 -1.1 116,603 - MPMX19_06350 0.22 -1.3 116,603 - MPMX19_06350 0.22 -0.3 116,624 - MPMX19_06350 0.24 -1.6 116,624 - MPMX19_06350 0.24 -1.0 116,762 + MPMX19_06350 0.37 -1.3 116,763 - MPMX19_06350 0.37 +0.2 116,843 - MPMX19_06350 0.44 -0.2 116,843 - MPMX19_06350 0.44 -0.9 116,843 - MPMX19_06350 0.44 +1.4 116,843 - MPMX19_06350 0.44 -0.1 116,971 + MPMX19_06350 0.56 -1.4 116,972 - MPMX19_06350 0.56 -1.2 116,972 - MPMX19_06350 0.56 -0.1 116,972 - MPMX19_06350 0.56 +0.8 117,379 + -0.4 117,379 + -1.7 117,379 + +1.0 117,379 + -0.4 117,379 + +0.2 117,380 - -1.2 117,380 - -1.0 117,787 + MPMX19_06351 0.77 -0.8 117,787 + MPMX19_06351 0.77 -0.2 117,787 + MPMX19_06351 0.77 -0.1 117,788 - MPMX19_06351 0.77 +1.0 117,788 - MPMX19_06351 0.77 +0.9 117,868 + -0.2 117,868 + -0.1 117,868 + +0.4 117,868 + -0.4 117,868 + -0.8 117,868 + -0.1 117,868 + -1.1 117,868 + -0.8 117,868 + -1.1 117,868 + +0.5 117,868 + +0.9 117,868 + +0.2 117,868 + +1.0 117,868 + +0.4 117,869 - -1.5 117,869 - +0.8 117,869 - -0.2 117,869 - -2.0 117,869 - -0.6 117,869 - +0.7 117,869 - +2.1 117,869 - +0.5 117,869 - -1.8 117,869 - +0.6 117,923 - -0.8 117,991 + MPMX19_06352 0.21 +0.4 118,386 + +2.1 118,387 - -2.9 118,387 - +0.9 118,387 - +0.4 118,387 - +0.5 118,387 - +0.3 118,387 - +0.2
Or see this region's nucleotide sequence