Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06279 and MPMX19_06280 are separated by 261 nucleotides MPMX19_06280 and MPMX19_06281 are separated by 13 nucleotides MPMX19_06281 and MPMX19_06282 are separated by 946 nucleotides
MPMX19_06279: MPMX19_06279 - L-threonine kinase, at 27,690 to 28,655
_06279
MPMX19_06280: MPMX19_06280 - Leucine-responsive regulatory protein, at 28,917 to 29,390
_06280
MPMX19_06281: MPMX19_06281 - hypothetical protein, at 29,404 to 29,859
_06281
MPMX19_06282: MPMX19_06282 - ATP-dependent RecD-like DNA helicase, at 30,806 to 33,031
_06282
Position (kb) 29
30 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 28.479 kb on + strand, within MPMX19_06279 at 28.479 kb on + strand, within MPMX19_06279 at 28.479 kb on + strand, within MPMX19_06279 at 28.479 kb on + strand, within MPMX19_06279 at 28.479 kb on + strand, within MPMX19_06279 at 28.479 kb on + strand, within MPMX19_06279 at 28.479 kb on + strand, within MPMX19_06279 at 28.479 kb on + strand, within MPMX19_06279 at 28.479 kb on + strand, within MPMX19_06279 at 28.479 kb on + strand, within MPMX19_06279 at 28.479 kb on + strand, within MPMX19_06279 at 28.479 kb on + strand, within MPMX19_06279 at 28.479 kb on + strand, within MPMX19_06279 at 28.479 kb on + strand, within MPMX19_06279 at 28.479 kb on + strand, within MPMX19_06279 at 28.479 kb on + strand, within MPMX19_06279 at 28.479 kb on + strand, within MPMX19_06279 at 28.480 kb on - strand, within MPMX19_06279 at 28.480 kb on - strand, within MPMX19_06279 at 28.480 kb on - strand, within MPMX19_06279 at 28.480 kb on - strand, within MPMX19_06279 at 28.480 kb on - strand, within MPMX19_06279 at 28.480 kb on - strand, within MPMX19_06279 at 28.480 kb on - strand, within MPMX19_06279 at 28.480 kb on - strand, within MPMX19_06279 at 28.570 kb on - strand at 28.570 kb on - strand at 28.570 kb on - strand at 28.570 kb on - strand at 28.687 kb on + strand at 28.700 kb on + strand at 28.701 kb on - strand at 28.732 kb on + strand at 28.732 kb on + strand at 28.732 kb on + strand at 28.732 kb on + strand at 28.732 kb on + strand at 28.732 kb on + strand at 28.736 kb on + strand at 28.737 kb on - strand at 28.737 kb on - strand at 28.737 kb on - strand at 28.795 kb on + strand at 28.813 kb on - strand at 29.217 kb on + strand, within MPMX19_06280 at 29.217 kb on + strand, within MPMX19_06280 at 29.217 kb on + strand, within MPMX19_06280 at 29.217 kb on + strand, within MPMX19_06280 at 29.218 kb on - strand, within MPMX19_06280 at 29.218 kb on - strand, within MPMX19_06280 at 29.218 kb on - strand, within MPMX19_06280 at 29.218 kb on - strand, within MPMX19_06280 at 29.218 kb on - strand, within MPMX19_06280 at 29.241 kb on + strand, within MPMX19_06280 at 29.241 kb on + strand, within MPMX19_06280 at 29.241 kb on + strand, within MPMX19_06280 at 29.241 kb on + strand, within MPMX19_06280 at 29.241 kb on + strand, within MPMX19_06280 at 29.241 kb on + strand, within MPMX19_06280 at 29.242 kb on - strand, within MPMX19_06280 at 29.242 kb on - strand, within MPMX19_06280 at 29.242 kb on - strand, within MPMX19_06280 at 29.242 kb on - strand, within MPMX19_06280 at 29.242 kb on - strand, within MPMX19_06280 at 29.242 kb on - strand, within MPMX19_06280 at 29.242 kb on - strand, within MPMX19_06280 at 29.242 kb on - strand, within MPMX19_06280 at 29.242 kb on - strand, within MPMX19_06280 at 29.242 kb on - strand, within MPMX19_06280 at 29.304 kb on + strand, within MPMX19_06280 at 29.304 kb on + strand, within MPMX19_06280 at 29.304 kb on + strand, within MPMX19_06280 at 29.304 kb on + strand, within MPMX19_06280 at 29.304 kb on + strand, within MPMX19_06280 at 29.305 kb on - strand, within MPMX19_06280 at 29.411 kb on + strand at 29.411 kb on + strand at 29.411 kb on + strand at 29.411 kb on + strand at 29.411 kb on + strand at 29.412 kb on - strand at 29.412 kb on - strand at 29.412 kb on - strand at 29.462 kb on + strand, within MPMX19_06281 at 29.462 kb on + strand, within MPMX19_06281 at 29.462 kb on + strand, within MPMX19_06281 at 29.463 kb on - strand, within MPMX19_06281 at 29.463 kb on - strand, within MPMX19_06281 at 29.463 kb on - strand, within MPMX19_06281 at 29.638 kb on + strand, within MPMX19_06281 at 29.800 kb on + strand, within MPMX19_06281 at 29.801 kb on - strand, within MPMX19_06281 at 29.801 kb on - strand, within MPMX19_06281 at 29.801 kb on - strand, within MPMX19_06281 at 29.890 kb on + strand at 29.890 kb on + strand at 29.891 kb on - strand at 29.891 kb on - strand at 30.000 kb on + strand at 30.000 kb on + strand at 30.000 kb on + strand at 30.000 kb on + strand at 30.213 kb on + strand at 30.213 kb on + strand at 30.214 kb on - strand at 30.214 kb on - strand at 30.244 kb on + strand at 30.244 kb on + strand at 30.285 kb on + strand at 30.285 kb on + strand at 30.285 kb on + strand at 30.286 kb on - strand at 30.286 kb on - strand at 30.286 kb on - strand at 30.286 kb on - strand at 30.292 kb on + strand at 30.292 kb on + strand at 30.292 kb on + strand at 30.293 kb on - strand at 30.293 kb on - strand at 30.305 kb on + strand at 30.305 kb on + strand at 30.306 kb on - strand at 30.307 kb on + strand at 30.307 kb on + strand at 30.307 kb on + strand at 30.307 kb on + strand at 30.307 kb on + strand at 30.307 kb on + strand at 30.308 kb on - strand at 30.308 kb on - strand at 30.308 kb on - strand at 30.308 kb on - strand at 30.308 kb on - strand at 30.313 kb on + strand at 30.314 kb on - strand at 30.339 kb on - strand at 30.339 kb on - strand at 30.433 kb on - strand at 30.538 kb on + strand at 30.538 kb on + strand at 30.539 kb on - strand at 30.616 kb on + strand at 30.617 kb on - strand at 30.617 kb on - strand at 30.617 kb on - strand at 30.617 kb on - strand at 30.688 kb on + strand at 30.688 kb on + strand at 30.688 kb on + strand at 30.688 kb on + strand at 30.688 kb on + strand at 30.688 kb on + strand at 30.689 kb on - strand at 30.689 kb on - strand at 30.689 kb on - strand at 30.689 kb on - strand at 30.690 kb on + strand at 30.690 kb on + strand at 30.690 kb on + strand at 30.690 kb on + strand at 30.690 kb on + strand at 30.690 kb on + strand at 30.691 kb on - strand at 30.691 kb on - strand at 30.691 kb on - strand at 30.691 kb on - strand at 30.691 kb on - strand at 30.691 kb on - strand at 30.691 kb on - strand at 30.723 kb on - strand at 30.723 kb on - strand at 30.723 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 28,479 + MPMX19_06279 0.82 -1.5 28,479 + MPMX19_06279 0.82 -0.5 28,479 + MPMX19_06279 0.82 +1.4 28,479 + MPMX19_06279 0.82 +0.0 28,479 + MPMX19_06279 0.82 +1.1 28,479 + MPMX19_06279 0.82 -1.8 28,479 + MPMX19_06279 0.82 -0.6 28,479 + MPMX19_06279 0.82 -0.3 28,479 + MPMX19_06279 0.82 -0.5 28,479 + MPMX19_06279 0.82 +1.8 28,479 + MPMX19_06279 0.82 -2.3 28,479 + MPMX19_06279 0.82 -0.4 28,479 + MPMX19_06279 0.82 -0.7 28,479 + MPMX19_06279 0.82 +0.6 28,479 + MPMX19_06279 0.82 -3.3 28,479 + MPMX19_06279 0.82 +0.9 28,479 + MPMX19_06279 0.82 -0.2 28,480 - MPMX19_06279 0.82 -0.2 28,480 - MPMX19_06279 0.82 +0.7 28,480 - MPMX19_06279 0.82 -0.7 28,480 - MPMX19_06279 0.82 -0.5 28,480 - MPMX19_06279 0.82 -0.3 28,480 - MPMX19_06279 0.82 +0.9 28,480 - MPMX19_06279 0.82 -0.2 28,480 - MPMX19_06279 0.82 +1.1 28,570 - -1.8 28,570 - -0.8 28,570 - +0.4 28,570 - -0.5 28,687 + -0.3 28,700 + -1.8 28,701 - -1.2 28,732 + -1.1 28,732 + -0.2 28,732 + +1.1 28,732 + +1.7 28,732 + -1.2 28,732 + +0.1 28,736 + -1.4 28,737 - -1.0 28,737 - -1.5 28,737 - +0.1 28,795 + -0.1 28,813 - -0.9 29,217 + MPMX19_06280 0.63 +0.0 29,217 + MPMX19_06280 0.63 -1.4 29,217 + MPMX19_06280 0.63 +0.2 29,217 + MPMX19_06280 0.63 -1.2 29,218 - MPMX19_06280 0.64 -1.5 29,218 - MPMX19_06280 0.64 +0.8 29,218 - MPMX19_06280 0.64 -0.9 29,218 - MPMX19_06280 0.64 -1.6 29,218 - MPMX19_06280 0.64 -0.5 29,241 + MPMX19_06280 0.68 +0.9 29,241 + MPMX19_06280 0.68 +3.1 29,241 + MPMX19_06280 0.68 +1.4 29,241 + MPMX19_06280 0.68 -0.2 29,241 + MPMX19_06280 0.68 +0.1 29,241 + MPMX19_06280 0.68 +2.1 29,242 - MPMX19_06280 0.69 +0.7 29,242 - MPMX19_06280 0.69 -0.2 29,242 - MPMX19_06280 0.69 -0.3 29,242 - MPMX19_06280 0.69 +0.5 29,242 - MPMX19_06280 0.69 -1.4 29,242 - MPMX19_06280 0.69 +0.6 29,242 - MPMX19_06280 0.69 +0.5 29,242 - MPMX19_06280 0.69 +0.4 29,242 - MPMX19_06280 0.69 -1.0 29,242 - MPMX19_06280 0.69 -1.6 29,304 + MPMX19_06280 0.82 -0.0 29,304 + MPMX19_06280 0.82 -1.1 29,304 + MPMX19_06280 0.82 -0.1 29,304 + MPMX19_06280 0.82 -0.5 29,304 + MPMX19_06280 0.82 -0.2 29,305 - MPMX19_06280 0.82 -0.4 29,411 + +1.4 29,411 + +0.1 29,411 + -0.8 29,411 + -0.4 29,411 + -0.3 29,412 - -1.2 29,412 - +0.2 29,412 - +0.8 29,462 + MPMX19_06281 0.13 +0.5 29,462 + MPMX19_06281 0.13 +0.2 29,462 + MPMX19_06281 0.13 -0.7 29,463 - MPMX19_06281 0.13 -0.0 29,463 - MPMX19_06281 0.13 -1.1 29,463 - MPMX19_06281 0.13 +1.7 29,638 + MPMX19_06281 0.51 +0.4 29,800 + MPMX19_06281 0.87 +1.6 29,801 - MPMX19_06281 0.87 +0.4 29,801 - MPMX19_06281 0.87 +0.9 29,801 - MPMX19_06281 0.87 +1.1 29,890 + +0.5 29,890 + -2.4 29,891 - -0.5 29,891 - +0.3 30,000 + -0.9 30,000 + +1.1 30,000 + +0.1 30,000 + -1.0 30,213 + +0.5 30,213 + -1.3 30,214 - +0.2 30,214 - -0.7 30,244 + -0.2 30,244 + -0.8 30,285 + +0.7 30,285 + -0.1 30,285 + -2.7 30,286 - -1.4 30,286 - +0.1 30,286 - -0.2 30,286 - -1.4 30,292 + -0.6 30,292 + -1.2 30,292 + -0.0 30,293 - -0.4 30,293 - +0.7 30,305 + -0.1 30,305 + +0.8 30,306 - -0.3 30,307 + +0.6 30,307 + -0.9 30,307 + +0.2 30,307 + -0.2 30,307 + -0.1 30,307 + -0.6 30,308 - -0.8 30,308 - -0.6 30,308 - -0.4 30,308 - -0.4 30,308 - +1.5 30,313 + +2.1 30,314 - -1.1 30,339 - -2.1 30,339 - -0.2 30,433 - -0.5 30,538 + -0.1 30,538 + +1.3 30,539 - +0.6 30,616 + +0.3 30,617 - -1.4 30,617 - +1.4 30,617 - -0.9 30,617 - -0.8 30,688 + +1.1 30,688 + +0.4 30,688 + +0.3 30,688 + -0.0 30,688 + -0.4 30,688 + -2.2 30,689 - +0.2 30,689 - -0.1 30,689 - -0.4 30,689 - -0.5 30,690 + -0.3 30,690 + -0.1 30,690 + +0.9 30,690 + -1.6 30,690 + -0.3 30,690 + -0.8 30,691 - +0.5 30,691 - +0.1 30,691 - +1.1 30,691 - +0.4 30,691 - +1.5 30,691 - -0.7 30,691 - -0.6 30,723 - -0.6 30,723 - -0.1 30,723 - -0.5
Or see this region's nucleotide sequence