Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06175 and MPMX19_06176 are separated by 14 nucleotides MPMX19_06176 and MPMX19_06177 are separated by 3 nucleotides MPMX19_06177 and MPMX19_06178 overlap by 4 nucleotides
MPMX19_06175: MPMX19_06175 - hypothetical protein, at 364,852 to 366,042
_06175
MPMX19_06176: MPMX19_06176 - Cytochrome bo(3) ubiquinol oxidase subunit 1, at 366,057 to 368,054
_06176
MPMX19_06177: MPMX19_06177 - Cytochrome bo(3) ubiquinol oxidase subunit 3, at 368,058 to 368,717
_06177
MPMX19_06178: MPMX19_06178 - hypothetical protein, at 368,714 to 369,148
_06178
Position (kb) 366
367
368
369 Strain fitness (log2 ratio) -1
0
1
2 at 365.465 kb on - strand, within MPMX19_06175 at 365.491 kb on + strand, within MPMX19_06175 at 365.548 kb on + strand, within MPMX19_06175 at 365.549 kb on - strand, within MPMX19_06175 at 366.190 kb on - strand at 366.207 kb on + strand at 366.943 kb on - strand, within MPMX19_06176 at 367.390 kb on - strand, within MPMX19_06176 at 367.390 kb on - strand, within MPMX19_06176 at 367.961 kb on + strand at 367.971 kb on + strand at 368.052 kb on + strand at 368.849 kb on + strand, within MPMX19_06178
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 365,465 - MPMX19_06175 0.51 +1.0 365,491 + MPMX19_06175 0.54 +2.0 365,548 + MPMX19_06175 0.58 -0.3 365,549 - MPMX19_06175 0.59 +2.6 366,190 - +0.4 366,207 + +0.4 366,943 - MPMX19_06176 0.44 +0.0 367,390 - MPMX19_06176 0.67 +1.0 367,390 - MPMX19_06176 0.67 -1.6 367,961 + -1.6 367,971 + -1.2 368,052 + -0.6 368,849 + MPMX19_06178 0.31 +1.4
Or see this region's nucleotide sequence