Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06174 and MPMX19_06175 are separated by 99 nucleotides MPMX19_06175 and MPMX19_06176 are separated by 14 nucleotides
MPMX19_06174: MPMX19_06174 - Inner membrane metabolite transport protein YhjE, at 363,442 to 364,752
_06174
MPMX19_06175: MPMX19_06175 - hypothetical protein, at 364,852 to 366,042
_06175
MPMX19_06176: MPMX19_06176 - Cytochrome bo(3) ubiquinol oxidase subunit 1, at 366,057 to 368,054
_06176
Position (kb) 364
365
366
367 Strain fitness (log2 ratio) -2
-1
0
1
2 at 364.078 kb on + strand, within MPMX19_06174 at 364.140 kb on - strand, within MPMX19_06174 at 364.190 kb on + strand, within MPMX19_06174 at 364.190 kb on + strand, within MPMX19_06174 at 364.190 kb on + strand, within MPMX19_06174 at 364.190 kb on + strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.191 kb on - strand, within MPMX19_06174 at 364.253 kb on + strand, within MPMX19_06174 at 364.253 kb on + strand, within MPMX19_06174 at 364.254 kb on - strand, within MPMX19_06174 at 364.389 kb on - strand, within MPMX19_06174 at 364.389 kb on - strand, within MPMX19_06174 at 364.389 kb on - strand, within MPMX19_06174 at 364.389 kb on - strand, within MPMX19_06174 at 364.466 kb on + strand, within MPMX19_06174 at 364.466 kb on + strand, within MPMX19_06174 at 364.467 kb on - strand, within MPMX19_06174 at 364.467 kb on - strand, within MPMX19_06174 at 364.467 kb on - strand, within MPMX19_06174 at 364.467 kb on - strand, within MPMX19_06174 at 364.571 kb on + strand, within MPMX19_06174 at 364.571 kb on + strand, within MPMX19_06174 at 364.572 kb on - strand, within MPMX19_06174 at 364.572 kb on - strand, within MPMX19_06174 at 364.572 kb on - strand, within MPMX19_06174 at 364.572 kb on - strand, within MPMX19_06174 at 364.572 kb on - strand, within MPMX19_06174 at 364.572 kb on - strand, within MPMX19_06174 at 364.572 kb on - strand, within MPMX19_06174 at 364.572 kb on - strand, within MPMX19_06174 at 364.617 kb on - strand, within MPMX19_06174 at 364.726 kb on + strand at 364.726 kb on + strand at 364.727 kb on - strand at 364.727 kb on - strand at 364.770 kb on - strand at 364.770 kb on - strand at 364.798 kb on + strand at 364.892 kb on + strand at 364.892 kb on + strand at 364.892 kb on + strand at 364.892 kb on + strand at 364.893 kb on - strand at 365.465 kb on - strand, within MPMX19_06175 at 365.491 kb on + strand, within MPMX19_06175 at 365.548 kb on + strand, within MPMX19_06175 at 365.549 kb on - strand, within MPMX19_06175 at 366.190 kb on - strand at 366.207 kb on + strand at 366.943 kb on - strand, within MPMX19_06176
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 364,078 + MPMX19_06174 0.49 -1.4 364,140 - MPMX19_06174 0.53 +0.9 364,190 + MPMX19_06174 0.57 -0.2 364,190 + MPMX19_06174 0.57 +0.6 364,190 + MPMX19_06174 0.57 -1.0 364,190 + MPMX19_06174 0.57 -1.4 364,191 - MPMX19_06174 0.57 -1.3 364,191 - MPMX19_06174 0.57 +2.4 364,191 - MPMX19_06174 0.57 -0.7 364,191 - MPMX19_06174 0.57 -0.2 364,191 - MPMX19_06174 0.57 +0.2 364,191 - MPMX19_06174 0.57 +0.4 364,191 - MPMX19_06174 0.57 -0.8 364,191 - MPMX19_06174 0.57 +0.1 364,191 - MPMX19_06174 0.57 -0.3 364,191 - MPMX19_06174 0.57 +0.6 364,191 - MPMX19_06174 0.57 -0.3 364,191 - MPMX19_06174 0.57 -2.5 364,191 - MPMX19_06174 0.57 +0.2 364,191 - MPMX19_06174 0.57 -0.2 364,253 + MPMX19_06174 0.62 -1.6 364,253 + MPMX19_06174 0.62 -1.3 364,254 - MPMX19_06174 0.62 -1.8 364,389 - MPMX19_06174 0.72 +0.5 364,389 - MPMX19_06174 0.72 +0.7 364,389 - MPMX19_06174 0.72 -0.3 364,389 - MPMX19_06174 0.72 +1.0 364,466 + MPMX19_06174 0.78 +1.0 364,466 + MPMX19_06174 0.78 -0.2 364,467 - MPMX19_06174 0.78 +0.0 364,467 - MPMX19_06174 0.78 +1.1 364,467 - MPMX19_06174 0.78 -1.6 364,467 - MPMX19_06174 0.78 -1.3 364,571 + MPMX19_06174 0.86 +0.7 364,571 + MPMX19_06174 0.86 -0.2 364,572 - MPMX19_06174 0.86 +0.0 364,572 - MPMX19_06174 0.86 -0.3 364,572 - MPMX19_06174 0.86 -0.3 364,572 - MPMX19_06174 0.86 +0.3 364,572 - MPMX19_06174 0.86 +1.4 364,572 - MPMX19_06174 0.86 +1.2 364,572 - MPMX19_06174 0.86 +0.6 364,572 - MPMX19_06174 0.86 +0.2 364,617 - MPMX19_06174 0.90 +0.6 364,726 + +0.2 364,726 + -0.8 364,727 - -1.2 364,727 - -1.0 364,770 - -0.6 364,770 - +0.0 364,798 + -1.0 364,892 + -0.3 364,892 + -1.3 364,892 + -2.3 364,892 + +0.4 364,893 - +2.0 365,465 - MPMX19_06175 0.51 +1.0 365,491 + MPMX19_06175 0.54 +2.0 365,548 + MPMX19_06175 0.58 -0.3 365,549 - MPMX19_06175 0.59 +2.6 366,190 - +0.4 366,207 + +0.4 366,943 - MPMX19_06176 0.44 +0.0
Or see this region's nucleotide sequence